HHsearch alignment for GI: 254781049 and conserved domain: PRK00885

Probab=99.08  E-value=3e-09  Score=80.60  Aligned_cols=199  Identities=21%  Similarity=0.247  Sum_probs=121.0

Q ss_pred             HHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHH
Q ss_conf             99999998689888815747999999999872998699971213687656565567777777079958999999999986
Q gi|254781049|r    7 QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI   86 (398)
Q Consensus         7 qaK~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~~a~~i   86 (398)
T Consensus       105 faK~~m~~~~IPTa~~~~f~~~~~A~~~l~~~~~p-~VIKaDGLAaGK--------------GV~V~~~~~ea~~al~~i  169 (424)
T PRK00885        105 FAKDFMARYGIPTAAYEVFTDAEEAKAYLDEQGAP-IVVKADGLAAGK--------------GVVVAMTLEEAEAAVDDM  169 (424)
T ss_pred             HHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCC-EEEECCCCCCCC--------------CEEEECCHHHHHHHHHHH
T ss_conf             99999998298987548868999999999857998-899617656777--------------517637899999999998


Q ss_pred             CCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHHEEEECCCCCC-C
Q ss_conf             187654421222224433011034555650589999983477804899844788402455574831220332144457-8
Q gi|254781049|r   87 LGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIG-V  165 (398)
Q Consensus        87 lg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~S~~GGvdIE~va~~~p~~I~~~~id~~~g-l  165 (398)
T Consensus       170 ~~~~~----fg~ag---~~VvIEE~L~G-~E~S~~a~~DG~~~~~lp~a--q----------Dh-KR~~dgD~GPNTGGM  228 (424)
T PRK00885        170 LAGNK----FGDAG---ARVVIEEFLDG-EEASFFALVDGENVLPLPTA--Q----------DH-KRAGDGDTGPNTGGM  228 (424)
T ss_pred             HCCCC----CCCCC---CEEEEEECCCC-CEEEEEEEECCCCCCCCCCC--C----------CC-CCCCCCCCCCCCCCC
T ss_conf             50332----34568---72899970588-31799999789972647021--1----------47-505689999889988


Q ss_pred             CHHHHHHHHHHCCCCHHHHHHH-HHHHHHHHHHHHHCCCCCCCC--CEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHH
Q ss_conf             9578887887519888998859-999999989999559751023--2679905996799400132157355641027863
Q gi|254781049|r  166 TSEDVASLCDMLELQGQARIDG-GDLFPNLYKAFCDKDMSLLEI--NPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL  242 (398)
Q Consensus       166 ~~~~~~~l~~~lg~~~~~~~~~-~~ii~~L~~~f~e~Da~liEI--NPLvvt~dg~vvAlDAKi~iDDnA~fR~~~~~~~  242 (398)
T Consensus       229 Ga~sP~p-----~~~~~~~~~i~~~Ii~pt~~~l~~eg~~y~GiLy~GlMit~~G-pk------VlEyN~RfGDPE~qvl  296 (424)
T PRK00885        229 GAYSPAP-----VVTEEVHDRVMEEIIEPTVKGMAAEGIPYTGVLYAGLMITKDG-PK------VIEFNCRFGDPETQVV  296 (424)
T ss_pred             CCCCCCC-----CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCC-CE------EEEEECCCCCHHHHHH
T ss_conf             5667886-----7999999999998799999999857984799987799986797-55------8986313488588899


Q ss_pred             HCCCCCCHHHH
Q ss_conf             10001562224
Q gi|254781049|r  243 RDVSEEDSREI  253 (398)
Q Consensus       243 ~d~~~~~~~E~  253 (398)
T Consensus       297 lp~L~~dl~~l  307 (424)
T PRK00885        297 LPRLKSDLVEL  307 (424)
T ss_pred             HHHCCCCHHHH
T ss_conf             87523619999