HHsearch alignment for GI: 254781049 and conserved domain: PRK06091
>PRK06091 membrane protein FdrA; Validated.
Probab=97.48 E-value=0.0029 Score=41.19 Aligned_cols=129 Identities=14% Similarity=0.182 Sum_probs=81.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCC---------------CEEEECCCCC----------CHHHHHHHHHHHHCCCCC
Q ss_conf 817999555036899999999658996---------------2488427888----------989999999998619986
Q gi|254781049|r 267 GNIGCMVNGAGLAMATMDIIKLYGGAP---------------ANFLDVGGGA----------DQDKVAAAFKIITSDSSV 321 (398)
Q Consensus 267 G~Ig~~vnGaGlamatmD~i~~~Gg~p---------------ANFlD~gG~a----------~~e~~~~a~~~il~~~~v 321 (398)
T Consensus 331 ~~irGLysGGTLa~EA~~ll~~~l~~~~~~~~~~g~~l~s~gH~iiDlGDD~fT~GRPHPMIDPs~R~e~i~~~a~Dp~v 410 (555)
T PRK06091 331 GFICGLYTGGTLAAEAAGLLAGHLGVEADDEHHHGMMLDADGHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQV 410 (555)
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 73799953712999999999987099888533544111058956986577423578988886827799999997349972
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHH------CCCCCCEEEECCCCC-----HHHHHHHHHHCCCCEEEECCHHHHHHH
Q ss_conf 589996358613289999999999997------299987999748985-----899999999769958994998999999
Q gi|254781049|r 322 KGILINIFGGIMRCDVLVKGILSAVKE------VKINIPLVMRLEGAN-----VDIGNRLIAESGLNVITAIDLDDAAQK 390 (398)
Q Consensus 322 k~iliNifGGI~~cd~vA~gii~a~~~------~~~~~pivvRl~Gtn-----~~~g~~il~~~g~~~~~~~~~~~A~~~ 390 (398)
T Consensus 411 ~VILlDvVLGyGah~DPag~L~paI~~a~~a~~~gr~l~vVa~V~GT~~DPQ~~~~Q~~~L~~AG--v~V~~SNa~A~~~ 488 (555)
T PRK06091 411 RVLLLDVVIGFGATADPAASLVSAWQKACAARSDNQPLYAIATVTGTERDPQCRSQQIATLEDAG--IAVVSSLPEATLL 488 (555)
T ss_pred EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCC--EEEECCCHHHHHH
T ss_conf 28999875326899984899999999999755338963899998078889738999999999689--5997573999999
Q ss_pred HHHHHHC
Q ss_conf 9998506
Q gi|254781049|r 391 IVHAVKG 397 (398)
Q Consensus 391 ~v~~~k~ 397 (398)
T Consensus 489 A~~l~~~ 495 (555)
T PRK06091 489 AAALIRP 495 (555)
T ss_pred HHHHHCC
T ss_conf 9997088