HHsearch alignment for GI: 254781049 and conserved domain: PRK06111

Probab=98.78  E-value=1.6e-06  Score=62.61  Aligned_cols=107  Identities=20%  Similarity=0.339  Sum_probs=78.5

Q ss_pred             HHHHHHHHHCCCCCCCCE--EECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHH
Q ss_conf             999999998689888815--747999999999872998699971213687656565567777777079958999999999
Q gi|254781049|r    6 YQAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDI   83 (398)
Q Consensus         6 yqaK~lL~~~GIpvp~g~--~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~~a   83 (398)
T Consensus       117 ~~ar~~a~~~gvPvvPG~~~~~~~~~ea~~~a~~iGyPv-liKA--a~GGGGr------------Gmriv~~~~el~~~~  181 (449)
T PRK06111        117 IEARRAMQAAGVPVVPGITTALEDAEEAIAIARQIGYPV-MLKA--SAGGGGI------------GMQLVETEQELTKAF  181 (449)
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCE-EEEE--CCCCCCC------------CEEEECCHHHHHHHH
T ss_conf             999999998399855786777899999999998659802-6620--3589867------------208957999999999


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEE
Q ss_conf             9861876544212222244330110345556505899999834778048998
Q gi|254781049|r   84 REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA  135 (398)
Q Consensus        84 ~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~  135 (398)
T Consensus       182 ~~~~~e-A---~~-~Fg--~~~v~iEk~i~~~RHIEVQvl~D~-~Gn~vhlg  225 (449)
T PRK06111        182 ESNKKR-A---AN-FFG--NGEMYLEKYIEDARHIEIQLLADT-HGNTVYLW  225 (449)
T ss_pred             HHHHHH-H---HH-HCC--CCCEEEEEECCCCCEEEEEEEECC-CCCEEEEE
T ss_conf             999999-9---98-639--960255441357733799999706-88888830