HHsearch alignment for GI: 254781049 and conserved domain: PRK08591

Probab=98.79  E-value=3.8e-07  Score=66.76  Aligned_cols=107  Identities=24%  Similarity=0.350  Sum_probs=79.4

Q ss_pred             HHHHHHHHHCCCCCCCCE--EECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHH
Q ss_conf             999999998689888815--747999999999872998699971213687656565567777777079958999999999
Q gi|254781049|r    6 YQAKALLRKYNVPVAKGV--VISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDI   83 (398)
Q Consensus         6 yqaK~lL~~~GIpvp~g~--~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~~a   83 (398)
T Consensus       117 ~~ar~~a~~agVPvvpgs~~~~~~~~ea~~~a~~iGyPv-~iKA--~~GGGGr------------Gmrvv~~~~el~~~~  181 (449)
T PRK08591        117 VTAKATMKKAGVPVVPGSDGPVDDEEEALAIAKEIGYPV-IIKA--TAGGGGR------------GMRVVRTEAELEKAF  181 (449)
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCE-EEEE--CCCCCCC------------EEEEECCHHHHHHHH
T ss_conf             999999998399978887665568999999998749966-9885--2689877------------699985678999999


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEE
Q ss_conf             9861876544212222244330110345556505899999834778048998
Q gi|254781049|r   84 REILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA  135 (398)
Q Consensus        84 ~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~  135 (398)
T Consensus       182 ~~~~~Ea----~---~aFg~~~v~iEk~i~~~RHIEVQilgD~~-Gn~vhl~  225 (449)
T PRK08591        182 SMARAEA----K---AAFGNPGVYMEKYLENPRHIEIQVLADGH-GNAIHLG  225 (449)
T ss_pred             HHHHHHH----H---HHCCCCCEEEEEECCCCCEEEEEEEECCC-CCEEECC
T ss_conf             9999999----9---73799856787712565367899986389-9889874