HHsearch alignment for GI: 254781049 and conserved domain: PRK10401
>PRK10401 DNA-binding transcriptional regulator GalS; Provisional.
Probab=93.42 E-value=0.64 Score=25.73 Aligned_cols=106 Identities=18% Similarity=0.179 Sum_probs=69.8
Q ss_pred HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHH-CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 9999999965899624884278889899999999986-199865899963586132899999999999972999879997
Q gi|254781049|r 280 MATMDIIKLYGGAPANFLDVGGGADQDKVAAAFKIIT-SDSSVKGILINIFGGIMRCDVLVKGILSAVKEVKINIPLVMR 358 (398)
Q Consensus 280 matmD~i~~~Gg~pANFlD~gG~a~~e~~~~a~~~il-~~~~vk~iliNifGGI~~cd~vA~gii~a~~~~~~~~pivvR 358 (398)
T Consensus 196 ~G~~~al~~~gl~~~~~~v~~~~~~~~~~~~~~~~ll~~~~~~tAi~-------~~nD~~A~g~l~al~~~Gl~VP~Dis 268 (346)
T PRK10401 196 AGWLSALKEQGIIPPESWIGTGTPDMQGGEAAMVELLGRNLQLTAVF-------AYNDNMAAGALTALKDNGIAIPLHLS 268 (346)
T ss_pred HHHHHHHHHCCCCCCHHEEEECCCCHHHHHHHHHHHHHCCCCCCCCE-------ECCHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 99999999849998701487268757889999999981599988614-------44889999999999985998998728
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH
Q ss_conf 489858999999997699589949989999999998
Q gi|254781049|r 359 LEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394 (398)
Q Consensus 359 l~Gtn~~~g~~il~~~g~~~~~~~~~~~A~~~~v~~ 394 (398)
T Consensus 269 ViGfDd~~-~a~~~~P~LTTV-~~p~~~mg~~Av~l 302 (346)
T PRK10401 269 IIGFDDIP-IARYTDPQLTTV-RYPIASMAKLATEL 302 (346)
T ss_pred EEEECCHH-HHHCCCCCCCEE-ECCHHHHHHHHHHH
T ss_conf 99989808-985289998769-60999999999999