HHsearch alignment for GI: 254781049 and conserved domain: PRK13789

Probab=99.06  E-value=2.7e-09  Score=80.91  Aligned_cols=212  Identities=21%  Similarity=0.260  Sum_probs=123.5

Q ss_pred             HHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHH
Q ss_conf             99999998689888815747999999999872998699971213687656565567777777079958999999999986
Q gi|254781049|r    7 QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI   86 (398)
Q Consensus         7 qaK~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~~a~~i   86 (398)
T Consensus       111 faK~fm~~~~IPTa~~~~f~~~~~A~~~l~~~~~P~-VIKaDGLAaGK--------------GV~V~~~~~eA~~al~~i  175 (426)
T PRK13789        111 FAKSLMKEAKIPTASYKTFTEYSSSLSYLESEMLPI-VIKADGLAAGK--------------GVTVATEKKMAKRALKEI  175 (426)
T ss_pred             HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCE-EEECCCCCCCC--------------CEEEECCHHHHHHHHHHH
T ss_conf             999999972999760157368999999998579988-99678768999--------------669539999999999997


Q ss_pred             CCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHHEEEECCCCC-CC
Q ss_conf             18765442122222443301103455565058999998347780489984478840245557483122033214445-78
Q gi|254781049|r   87 LGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLI-GV  165 (398)
Q Consensus        87 lg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~S~~GGvdIE~va~~~p~~I~~~~id~~~-gl  165 (398)
T Consensus       176 ~~~~~----fg~ag---~~VvIEE~L~G-~E~S~~a~~dG~~~--~~lp~aQ----------Dh-KR~~dgD~GPNTGGM  234 (426)
T PRK13789        176 FKDKK----FGQSG---NQVVIEEFMEG-QEASIFAISDGDSY--FLLPAAQ----------DH-KRAFDGDQGPNTGGM  234 (426)
T ss_pred             HHHHH----HHCCC---CEEEEEECCCC-CCEEEEEEECCCEE--EECCCCC----------CC-CCCCCCCCCCCCCCC
T ss_conf             54423----30358---75999974589-84479999729977--8688644----------44-213379999999987


Q ss_pred             CHHHHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHCCCCCCCC--CEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHH
Q ss_conf             95788878875198889988599-99999989999559751023--2679905996799400132157355641027863
Q gi|254781049|r  166 TSEDVASLCDMLELQGQARIDGG-DLFPNLYKAFCDKDMSLLEI--NPLIIMKNGRLRVLDSKISFDDNALYRHLDIQEL  242 (398)
Q Consensus       166 ~~~~~~~l~~~lg~~~~~~~~~~-~ii~~L~~~f~e~Da~liEI--NPLvvt~dg~vvAlDAKi~iDDnA~fR~~~~~~~  242 (398)
T Consensus       235 GaysP~-----p~~~~~~~~~i~~~ii~pt~~~l~~~g~~y~GvLy~GlMlt~~G~pkVl------EfN~RfGDPE~q~i  303 (426)
T PRK13789        235 GAYCPA-----PVITEAILQKVKERIFDPMFDDFRKKGHPYRGLLYAGLMISPEGEPKVV------EFNCRFGDPETQCV  303 (426)
T ss_pred             CCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEE------EEEEECCCCHHHHH
T ss_conf             677778-----6689999999998604899999985899988676532899269976999------98853189168889


Q ss_pred             HCCCCCCHHHH--HHHHCCCCEEEC
Q ss_conf             10001562224--577539864422
Q gi|254781049|r  243 RDVSEEDSREI--EAKQHNLSYIAL  265 (398)
Q Consensus       243 ~d~~~~~~~E~--~A~~~~l~yv~L  265 (398)
T Consensus       304 Lp~L~~dl~~~~~a~~~g~L~~~~~  328 (426)
T PRK13789        304 LAMLDGDLLELLYAASTGKIKVVNL  328 (426)
T ss_pred             HHHHHCCHHHHHHHHHHCCCCCCCC
T ss_conf             8874154999999997088664544