HHsearch alignment for GI: 254781049 and conserved domain: TIGR02144
>TIGR02144 LysX_arch Lysine biosynthesis enzyme LysX; InterPro: IPR011870 The family of proteins found in this family include the characterised LysX from Thermus thermophilus which is part of a well-organised lysine biosynthesis gene cluster . LysX is believed to carry out an ATP-dependent acylation of the amino group of alpha-aminoadipate in the prokaryotic version of the fungal AAA lysine biosynthesis pathway. No species having a sequence in this family contains the elements of the more common diaminopimelate lysine biosythesis pathway, and none has been shown to be a lysine auxotroph. These sequences have mainly recieved the name of the related enzyme, "ribosomal protein S6 modification protein RimK". RimK has been characterised in Escherichia coli, and acts by ATP-dependent condensation of S6 with glutamate residues .; GO: 0003824 catalytic activity, 0005524 ATP binding, 0009085 lysine biosynthetic process.
Probab=98.67 E-value=7.9e-08 Score=71.24 Aligned_cols=81 Identities=26% Similarity=0.278 Sum_probs=63.6
Q ss_pred HHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHH--HHH
Q ss_conf 999999986898888157479999999998729986999712136876565655677777770799589999999--999
Q gi|254781049|r 7 QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVIS--DIR 84 (398)
Q Consensus 7 qaK~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~--~a~ 84 (398)
T Consensus 91 ~T~~~L~~~gvP~P~t~~a~d~~~A~~~~e~lGYPv-V~KP~~GSWGRlV~--------------~~~d~~~~~~llEh~ 155 (289)
T TIGR02144 91 FTTLKLAKAGVPTPRTYIAFDREAALKAAEELGYPV-VLKPVIGSWGRLVS--------------KIRDKDELESLLEHK 155 (289)
T ss_pred HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCE-EEECCCCCHHHHHH--------------HHCCHHHHHHHHHHH
T ss_conf 899999966788983589828689999999708988-97088884378876--------------403788988999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 86187654421222224433011034555
Q gi|254781049|r 85 EILGSTLITKQTGPTGSRVNCVYVEDGAD 113 (398)
Q Consensus 85 ~ilg~~l~t~qt~~~G~~v~~vLVEe~v~ 113 (398)
T Consensus 156 e~~~~-----------~~~~~~y~QEfi~ 173 (289)
T TIGR02144 156 EVLGG-----------SQLKLYYVQEFIN 173 (289)
T ss_pred HHHCC-----------CCCCEEEEEEEEC
T ss_conf 98679-----------7633379998871