HHsearch alignment for GI: 254781049 and conserved domain: pfam08442

Probab=100.00  E-value=0  Score=458.03  Aligned_cols=201  Identities=48%  Similarity=0.740  Sum_probs=199.1

Q ss_pred             CCCHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHH
Q ss_conf             86579999999986898888157479999999998729986999712136876565655677777770799589999999
Q gi|254781049|r    2 NIHEYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVIS   81 (398)
Q Consensus         2 ~L~EyqaK~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~   81 (398)
T Consensus         1 nlhEyqaK~ll~~~gIpvp~g~~~~~~~ea~~~~~~l~~~~~VvKaQv~aGGRGKa----------GGVk~~~~~~ea~~   70 (202)
T pfam08442         1 NLHEYQAKEILAKYGVPVPRGEVAFSPEEAEEIAKKLGGKVYVVKAQVLAGGRGKA----------GGVKLAKSPEEAKE   70 (202)
T ss_pred             CCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEEECCCCCCCC----------CEEEEECCHHHHHH
T ss_conf             95388999999985998999159699999999999809986999874235888767----------73899789999999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHHEEEECCC
Q ss_conf             99986187654421222224433011034555650589999983477804899844788402455574831220332144
Q gi|254781049|r   82 DIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDP  161 (398)
Q Consensus        82 ~a~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~S~~GGvdIE~va~~~p~~I~~~~id~  161 (398)
T Consensus        71 ~a~~~lg~~l~T~QTg~~G~~V~~vlvee~~~i~~E~Ylsi~~DR~~~~~~ii~S~~GG~dIEeVa~~~Pe~I~k~~id~  150 (202)
T pfam08442        71 AAKEMLGKNLVTKQTGPEGKPVNKVLVEEAVDIAREYYLSIVLDRASRGPVVIASSEGGVDIEEVAAKNPEAIIKVPIDP  150 (202)
T ss_pred             HHHHHCCCEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCEEEEEECCCCCCHHHHHCCCHHHEEEEEECC
T ss_conf             99987297787550278896233899985154010079999975777844789726788509997300955729997187


Q ss_pred             CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
Q ss_conf             457895788878875198889988599999999899995597510232679
Q gi|254781049|r  162 LIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLI  212 (398)
Q Consensus       162 ~~gl~~~~~~~l~~~lg~~~~~~~~~~~ii~~L~~~f~e~Da~liEINPLv  212 (398)
T Consensus       151 ~~gl~~~~~r~~~~~lg~~~~~~~~~~~~i~~Ly~~f~~~Da~llEINPLV  201 (202)
T pfam08442       151 AKGLTPYQAREIAFKLGLEGELVKQAADIIKKLYKLFVEYDATLVEINPLV  201 (202)
T ss_pred             CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf             879899999999998499989999999999999999996698289756887