HHsearch results for GI: 254781049 and protein with PDBid: 1a9x_A
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=98.77 E-value=2e-07 Score=67.15 Aligned_cols=324 Identities=13% Similarity=0.114 Sum_probs=170.5
Q ss_pred HHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH
Q ss_conf 99999999868988881574799999999987299869997121368765656556777777707995899999999998
Q gi|254781049|r 6 YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIRE 85 (398)
Q Consensus 6 yqaK~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~~a~~ 85 (398)
...++++.+.|||+|++..++|.+||.+.++++|||+ .+|+----||| |.+++.|.+|+.+..++
T Consensus 676 ~~f~~ll~~lgi~~p~~~~~~s~eea~~~a~~iGyPV-lvRpSyvlGG~--------------~M~iv~~~~eL~~~l~~ 740 (1073)
T 1a9x_A 676 ERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPL-VVRASYVLGGR--------------AMEIVYDEADLRRYFQT 740 (1073)
T ss_dssp HHHHHHHHHHTCCCCCEEECCSHHHHHHHHHHHCSSE-EEEC---------------------CEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCE-EEECCCCCCCC--------------CEEEEECHHHHHHHHHH
T ss_conf 9999999972888888754487889999998649976-97413356677--------------42799648999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCHHHHEEEECCCCCCC
Q ss_conf 61876544212222244330110345556505899999834778048998447884024555748312203321444578
Q gi|254781049|r 86 ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAKDYPQKIFKLLIDPLIGV 165 (398)
Q Consensus 86 ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~S~~GGvdIE~va~~~p~~I~~~~id~~~gl 165 (398)
-... . + -..|+|++++...+|+=+=+..|.. ...+.+..+ +||...-++.|..... |...+
T Consensus 741 a~~~------s-~----~~~vlIekfl~~~~EiEvd~i~Dg~--~v~i~~i~E---hIe~aGvHsgDs~~v~---P~~~L 801 (1073)
T 1a9x_A 741 AVSV------S-N----DAPVLLDHFLDDAVEVDVDAICDGE--MVLIGGIME---HIEQAGVHSGDSACSL---PAYTL 801 (1073)
T ss_dssp CC-------------------EEEBCCTTCEEEEEEEEECSS--CEEEEEEEE---ESSCTTSCGGGCCEEE---SCSSC
T ss_pred HHHH------C-C----CCCEEEEEECCCCEEEEEEEECCCC--EEEEEECCC---CCCCCCCCCCCCCCCC---CCCCC
T ss_conf 9964------9-9----9988887615786577766212687--589940401---3234776324534507---98336
Q ss_pred CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEEEECCCHHHH----H-----
Q ss_conf 9578887887519888998859999999989999559751023267990599679940013215735564----1-----
Q gi|254781049|r 166 TSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFDDNALYR----H----- 236 (398)
Q Consensus 166 ~~~~~~~l~~~lg~~~~~~~~~~~ii~~L~~~f~e~Da~liEINPLvvt~dg~vvAlDAKi~iDDnA~fR----~----- 236 (398)
++ +..+.+.+...++.+.+.-..+ +|==.+.+|++++.+-+.-...-+.-|- -
T Consensus 802 s~--------------~~~~~i~~~a~kia~~l~i~G~----~niQF~vkd~~~yviE~NpRasrt~pf~sk~tG~~lv~ 863 (1073)
T 1a9x_A 802 SQ--------------EIQDVMRQQVQKLAFELQVRGL----MNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAK 863 (1073)
T ss_dssp CH--------------HHHHHHHHHHHHHHHHTTCCEE----EEEEEEECSSCEEEEEEECSCCTTHHHHHHHHSCCHHH
T ss_pred CH--------------HHHHHHHHHHHHHHHHCCCCCC----EEEEEEEECCEEEEEECCCCCCCCCHHHHHHHCCCHHH
T ss_conf 99--------------9999999999999986462342----27999998999999974242012208999884987999
Q ss_pred --------HHHHHHHCCCCCCHHHHHHHHCCCCEEECC-------------CCEEEEECCCHHHHHHHHHHHHCCCCC--
Q ss_conf --------027863100015622245775398644228-------------817999555036899999999658996--
Q gi|254781049|r 237 --------LDIQELRDVSEEDSREIEAKQHNLSYIALD-------------GNIGCMVNGAGLAMATMDIIKLYGGAP-- 293 (398)
Q Consensus 237 --------~~~~~~~d~~~~~~~E~~A~~~~l~yv~Ld-------------G~Ig~~vnGaGlamatmD~i~~~Gg~p-- 293 (398)
+.+.++....+..+.-.--+..=++|-+|. |.+.|+ |--+..|..-.....|.+.
T Consensus 864 ~a~~i~lG~~L~~~~~~~~~~~~~~~VK~pvfsf~k~~g~d~~LgpeMkSTGEvmg~--g~~~~eA~~Ka~~a~~~~ip~ 941 (1073)
T 1a9x_A 864 VAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGV--GRTFAEAFAKAQLGSNSTMKK 941 (1073)
T ss_dssp HHHHHHTTCCHHHHTCCSCCCCSSEEEEEEECGGGGCTTSCCCCCSSCCCCEEEEEE--ESSHHHHHHHHHHHTTCCCCS
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCCCCCCCEECCCCEEE--CCCHHHHHHHHHHHCCCCCCC
T ss_conf 999998499610048886778980899900377110589989889880023455674--399999999999974998798
Q ss_pred -CEEEECCCCCCHHHHHHHHHHH----------------HCCCCCCEEEEEC-CCCHHHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf -2488427888989999999998----------------6199865899963-586132899999999999972999879
Q gi|254781049|r 294 -ANFLDVGGGADQDKVAAAFKII----------------TSDSSVKGILINI-FGGIMRCDVLVKGILSAVKEVKINIPL 355 (398)
Q Consensus 294 -ANFlD~gG~a~~e~~~~a~~~i----------------l~~~~vk~iliNi-fGGI~~cd~vA~gii~a~~~~~~~~pi 355 (398)
.+.+=.....+.+++....+.+ |.+.++++-.||- .-|- .-|++.+++.+++ +
T Consensus 942 ~g~v~isv~d~dK~~~~~~a~~l~~lGf~i~aT~GTa~~L~~~gi~~~~v~kv~e~~-------p~i~d~i~~~~i~--l 1012 (1073)
T 1a9x_A 942 HGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGR-------PHIQDRIKNGEYT--Y 1012 (1073)
T ss_dssp SSEEEEECCGGGGTTHHHHHHHHHHTTCEEEECHHHHHHHHTTTCCCEECBCTTTCS-------SBHHHHHHHTCCS--E
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCEEEECCCCCCC-------CCHHHHHHCCCEE--E
T ss_conf 887999962243899999999999869989985699999997699159962668999-------3599999769857--9
Q ss_pred EEECCCCC-H-HHHHH---HHHHCCCCEEEECCHHHHHHHHHHHH
Q ss_conf 99748985-8-99999---99976995899499899999999985
Q gi|254781049|r 356 VMRLEGAN-V-DIGNR---LIAESGLNVITAIDLDDAAQKIVHAV 395 (398)
Q Consensus 356 vvRl~Gtn-~-~~g~~---il~~~g~~~~~~~~~~~A~~~~v~~~ 395 (398)
|+-....+ . +.|.+ .--+.++|+++ +++ +++..++..
T Consensus 1013 VINt~~~~~~~~d~~~iRr~Av~~~ip~~T--~~~-~a~~~~~al 1054 (1073)
T 1a9x_A 1013 IINTTSGRRAIEDSRVIRRSALQYKVHYDT--TLN-GGFATAMAL 1054 (1073)
T ss_dssp EEECCCSHHHHHHTHHHHHHHHHTTCEEES--SHH-HHHHHHHHH
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHCCCEEE--CHH-HHHHHHHHH
T ss_conf 998999987677649999999972999894--799-999999999