HHsearch results for GI: 254781049 and protein with PDBid: 2i87_A

>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 2i80_A*
Probab=98.80  E-value=5.5e-07  Score=64.28  Aligned_cols=93  Identities=16%  Similarity=0.191  Sum_probs=69.9

Q ss_pred             HHHHHHHHHHCCCCCCCCEEECCHHH-------HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHH
Q ss_conf             79999999986898888157479999-------99999872998699971213687656565567777777079958999
Q gi|254781049|r    5 EYQAKALLRKYNVPVAKGVVISSVHA-------AESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLK   77 (398)
Q Consensus         5 EyqaK~lL~~~GIpvp~g~~a~s~~e-------a~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~   77 (398)
                      =+.+|++|+++|||+|++.+....+.       +..+...++||+ |||+--..|+              =||.++.+.+
T Consensus       130 K~~~k~~l~~~gIptp~~~~~~~~~~~~~~~~~l~~~~~~~~~Pv-vvKP~~~g~S--------------~Gv~~v~~~~  194 (364)
T 2i87_A          130 KLVMKQLFEHRGLPQLPYISFLRSEYEKYEHNILKLVNDKLNYPV-FVKPANLGSS--------------VGISKCNNEA  194 (364)
T ss_dssp             HHHHHHHHHHHTCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCSSE-EEEESSCSSC--------------TTCEEESSHH
T ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCE-EEEECCCCCC--------------CCCEEECCHH
T ss_conf             899999999869986986676134222005889999997628986-9984677778--------------7616844789


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEEC
Q ss_conf             9999999861876544212222244330110345556505899999834
Q gi|254781049|r   78 SVISDIREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDR  126 (398)
Q Consensus        78 ea~~~a~~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr  126 (398)
                      |+.++.++.+...             +.++||+.++ .+|+.+++..+.
T Consensus       195 el~~~i~~~~~~~-------------~~~lvEe~i~-g~E~~~~v~~~~  229 (364)
T 2i87_A          195 ELKEGIKEAFQFD-------------RKLVIEQGVN-AREIEVAVLGND  229 (364)
T ss_dssp             HHHHHHHHHHTTC-------------SEEEEEECCC-CEEEEEEEEESS
T ss_pred             HHHHHHHHHHHCC-------------HHHHHHCCCC-CEEEEEEEEECC
T ss_conf             9999999997508-------------4544430427-679999851135