HHsearch results for GI: 254781049 and protein with PDBid: 2ip4_A
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotide, structural genomics, NPPSFA; 2.80A {Thermus thermophilus HB8}
Probab=99.13 E-value=8.5e-10 Score=82.78 Aligned_cols=195 Identities=22% Similarity=0.279 Sum_probs=115.6
Q ss_pred HHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHH
Q ss_conf 79999999986898888157479999999998729986999712136876565655677777770799589999999999
Q gi|254781049|r 5 EYQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIR 84 (398)
Q Consensus 5 EyqaK~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~~a~ 84 (398)
-.-+|+++++||||+|++..+++.+||.+.++++++|+ |+|+.-++||| ||.++.+.+|+.++..
T Consensus 102 K~~~k~~m~~~gIpt~~~~~~~~~~ea~~~~~~~~~P~-ViKp~~~a~gk--------------Gv~i~~~~~e~~~~~~ 166 (417)
T 2ip4_A 102 KAFAKGLMERYGIPTARYRVFREPLEALAYLEEVGVPV-VVKDSGLAAGK--------------GVTVAFDLHQAKQAVA 166 (417)
T ss_dssp HHHHHHHHHHTCCCBCCEEEESSHHHHHHHHHHHCSSE-EEECTTSCSST--------------TCEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHCCCCE-EEECCCCCCCC--------------CEEEECCHHHHHHHHH
T ss_conf 89999999981989888549935899999999769988-99727878987--------------6466400788888876
Q ss_pred HHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCHHHHHH--HCHHHHEEEECCCC
Q ss_conf 8618765442122222443301103455565058999998347780489984478840245557--48312203321444
Q gi|254781049|r 85 EILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMDIEEVAK--DYPQKIFKLLIDPL 162 (398)
Q Consensus 85 ~ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~S~~GGvdIE~va~--~~p~~I~~~~id~~ 162 (398)
+++... .+ ..|+|||+++. .|+=+-...|-.. .+.+...+ |.....+ .-|..--.-.+.|.
T Consensus 167 ~~~~~~--------~~---~~VlIEE~l~G-~E~s~~~~~dg~~--~~~l~~~q---d~kr~~~gd~GpntggmGa~~p~ 229 (417)
T 2ip4_A 167 NILNRA--------EG---GEVVVEEYLEG-EEATVLALTDGET--ILPLLPSQ---DHKRLLDGDQGPMTGGMGAVAPY 229 (417)
T ss_dssp HHTTSS--------SC---CCEEEEECCCS-CEEEEEEEESSSC--EEECCCBE---ECCEEETTTEEEECSCSEEEESC
T ss_pred HHHHHC--------CC---CEEHHHHHHCC-CCCEEEEEECCCC--CCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 432004--------68---60607656354-5525899963785--33466422---54134569999988987677888
Q ss_pred CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCEEEECCCCCEEEEEEEEEECCCHHHHHHHH
Q ss_conf 578957888788751988899885999999998999955975---10232679905996799400132157355641027
Q gi|254781049|r 163 IGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMS---LLEINPLIIMKNGRLRVLDSKISFDDNALYRHLDI 239 (398)
Q Consensus 163 ~gl~~~~~~~l~~~lg~~~~~~~~~~~ii~~L~~~f~e~Da~---liEINPLvvt~dg~vvAlDAKi~iDDnA~fR~~~~ 239 (398)
.+... .......+++....+.+...... .+-+. |.+|++| +.. +.=|+.|..|+.
T Consensus 230 -~~~~~-------------~~~~~~~~i~~~~~~~l~~~g~~y~G~l~~g-lmlt~~g-p~v------iE~N~R~Gdpe~ 287 (417)
T 2ip4_A 230 -PMDEA-------------TLRRVEEEILGPLVRGLRAEGVVYRGVVYAG-LMLTREG-PKV------LEFNARFGDPEA 287 (417)
T ss_dssp -CCCHH-------------HHHHHHHHTHHHHHHHHHHTTCCCCEEEEEE-EEECSSC-EEE------EEEESSCCTTHH
T ss_pred -CCCHH-------------HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE-EEEECCC-CEE------EEEECCCCCCCC
T ss_conf -63047-------------8999999999999999997199744300103-4784588-779------998513589865
Q ss_pred HHHHCCCCCCHHHH
Q ss_conf 86310001562224
Q gi|254781049|r 240 QELRDVSEEDSREI 253 (398)
Q Consensus 240 ~~~~d~~~~~~~E~ 253 (398)
..+....+.+-.+.
T Consensus 288 ~~~l~~l~~dl~~~ 301 (417)
T 2ip4_A 288 QALLPLLENDLVEL 301 (417)
T ss_dssp HHHTTTBCSCHHHH
T ss_pred CEEEECCCCCHHHH
T ss_conf 34652246765888