HHsearch results for GI: 254781049 and protein with PDBid: 2pn1_A
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, structural genomics; 2.00A {Exiguobacterium sibiricum 255-15}
Probab=98.26 E-value=2.3e-06 Score=60.19 Aligned_cols=97 Identities=19% Similarity=0.117 Sum_probs=74.0
Q ss_pred HHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH
Q ss_conf 99999999868988881574799999999987299869997121368765656556777777707995899999999998
Q gi|254781049|r 6 YQAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIRE 85 (398)
Q Consensus 6 yqaK~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~~a~~ 85 (398)
+..+++|+++|||+|+...+.+..+......+++||+ |+|+..-+|+| ||..++|.+|+.....+
T Consensus 116 ~~~~~~l~~~gip~p~~~~~~~~~e~~~~~~~~~~P~-vvKP~~g~gs~--------------gv~~i~~~~el~~~~~~ 180 (331)
T 2pn1_A 116 YTMYEYCLRQGIAHARTYATMASFEEALAAGEVQLPV-FVKPRNGSASI--------------EVRRVETVEEVEQLFSK 180 (331)
T ss_dssp HHHHHHHHHHTCCCCCEESSHHHHHHHHHTTSSCSCE-EEEESBC-----------------------------------
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCE-EEEECCCCCCC--------------CEEEECCHHHHHHHHHH
T ss_conf 9999999986998322213346588999887538977-99868889888--------------75997479999999872
Q ss_pred HCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEE
Q ss_conf 61876544212222244330110345556505899999834778048998
Q gi|254781049|r 86 ILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA 135 (398)
Q Consensus 86 ilg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~ 135 (398)
. ..++|||.++. .|+-+.+..|...+.+..+.
T Consensus 181 ~-----------------~~~iiqe~i~G-~e~~v~~~~~~~~g~~~~~~ 212 (331)
T 2pn1_A 181 N-----------------TDLIVQELLVG-QELGVDAYVDLISGKVTSIF 212 (331)
T ss_dssp -------------------CEEEEECCCS-EEEEEEEEECTTTCCEEEEE
T ss_pred C-----------------CCHHHHHHHCC-CEEEEEEEEECCCCCEEEEE
T ss_conf 6-----------------12212454067-33279999985799165430