HHsearch results for GI: 254781049 and protein with PDBid: 3dmy_A
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.07A {Escherichia coli K12}
Probab=98.05 E-value=0.00019 Score=47.60 Aligned_cols=129 Identities=16% Similarity=0.201 Sum_probs=94.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCC---------------CEEEECCCC----------CCHHHHHHHHHHHHCCCCC
Q ss_conf 817999555036899999999658996---------------248842788----------8989999999998619986
Q gi|254781049|r 267 GNIGCMVNGAGLAMATMDIIKLYGGAP---------------ANFLDVGGG----------ADQDKVAAAFKIITSDSSV 321 (398)
Q Consensus 267 G~Ig~~vnGaGlamatmD~i~~~Gg~p---------------ANFlD~gG~----------a~~e~~~~a~~~il~~~~v 321 (398)
+.|..+..|+.|+--.++.+...++.. ..+.|+|.. .+++...+++..++.||+|
T Consensus 250 ~~i~gl~sGGtLa~ea~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~dlgdd~~T~GrphpmiDP~~r~~~l~~~~~Dp~v 329 (480)
T 3dmy_A 250 GFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQV 329 (480)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHTTCC---CCGGGEEEEETTEEEEETTSHHHHTTSCCTTTCCHHHHHHHHHGGGCTTE
T ss_pred CCEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 32022036215999989998864156777420002220478886423476254246866565868999999998459987
Q ss_pred CEEEEEC-CCCHHH---HHHHHHHHHHHHHHC--CCCCCEEEECCCCC-----HHHHHHHHHHCCCCEEEECCHHHHHHH
Q ss_conf 5899963-586132---899999999999972--99987999748985-----899999999769958994998999999
Q gi|254781049|r 322 KGILINI-FGGIMR---CDVLVKGILSAVKEV--KINIPLVMRLEGAN-----VDIGNRLIAESGLNVITAIDLDDAAQK 390 (398)
Q Consensus 322 k~iliNi-fGGI~~---cd~vA~gii~a~~~~--~~~~pivvRl~Gtn-----~~~g~~il~~~g~~~~~~~~~~~A~~~ 390 (398)
-+|++.+ +|--.. .-.++..|.++.+.. +..+|+|+-..||. .++.++.|+++|++++ .+.++|++.
T Consensus 330 ~vVLldvVlg~ga~~dpa~~l~~aI~~a~~a~~~~~~~~vVa~v~Gt~~dpq~~~~~~~~L~~AGV~v~--~S~~~A~r~ 407 (480)
T 3dmy_A 330 RVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVV--SSLPEATLL 407 (480)
T ss_dssp EEEEEEEECSTTSCSCHHHHHHHHHHHHHHTSCTTSCCEEEEEEESCTTSTTCHHHHHHHHHHTTCEEC--SSHHHHHHH
T ss_pred CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEE--CCHHHHHHH
T ss_conf 789996303576565728889999999998644289816999975777786247999999997898342--888999999
Q ss_pred HHHHHHC
Q ss_conf 9998506
Q gi|254781049|r 391 IVHAVKG 397 (398)
Q Consensus 391 ~v~~~k~ 397 (398)
+.++.+.
T Consensus 408 a~~l~~~ 414 (480)
T 3dmy_A 408 AAALIHP 414 (480)
T ss_dssp HHHHTSC
T ss_pred HHHHHCC
T ss_conf 9997087