HHsearch results for GI: 254781049 and protein with PDBid: 3mjf_A
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=99.02 E-value=4.3e-09 Score=78.16 Aligned_cols=189 Identities=21% Similarity=0.243 Sum_probs=120.2
Q ss_pred HHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHH
Q ss_conf 99999998689888815747999999999872998699971213687656565567777777079958999999999986
Q gi|254781049|r 7 QAKALLRKYNVPVAKGVVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISDIREI 86 (398)
Q Consensus 7 qaK~lL~~~GIpvp~g~~a~s~~ea~~~a~~ig~p~~VvKaQV~aGgRGKa~~~~~hk~~~GGV~l~~s~~ea~~~a~~i 86 (398)
-+|+++++||||+|++..+++.++|.+..++.++|. |+|+.-++||+ ||.++.+.+++.++.+++
T Consensus 110 fak~~m~~~~IPta~~~~~~~~~~a~~~~~~~~~p~-VIK~dgla~GK--------------GV~v~~~~~ea~~a~~~~ 174 (431)
T 3mjf_A 110 FTKDFLARHNIPSAEYQNFTDVEAALAYVRQKGAPI-VIKADGLAAGK--------------GVIVAMTQEEAETAVNDM 174 (431)
T ss_dssp HHHHHHHHTTCSBCCEEEESCHHHHHHHHHHHCSSE-EEEESSSCTTC--------------SEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCEEEECCHHHHHHHHHCCCCCE-EEEECCCCCCC--------------CCEEEECHHHHHHHHHHH
T ss_conf 999998752658874699589999998752569877-99716667877--------------626752116889989998
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCEEEEE------------ECCCCCCHHHHHHHCHHHH
Q ss_conf 1876544212222244330110345556505899999834778048998------------4478840245557483122
Q gi|254781049|r 87 LGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIA------------STQGGMDIEEVAKDYPQKI 154 (398)
Q Consensus 87 lg~~l~t~qt~~~G~~v~~vLVEe~v~~~~E~ylgi~~Dr~~~~~vii~------------S~~GGvdIE~va~~~p~~I 154 (398)
+.... .|..-..|+|||++. +.|+=+-...|-..-.|+... -.-|||--
T Consensus 175 ~~~~~-------~g~~g~~vvIEE~L~-G~E~S~~a~~dG~~~~~lp~~qDhKR~~dgD~GPNTGGMGa----------- 235 (431)
T 3mjf_A 175 LAGNA-------FGDAGHRIVVEEFLD-GEEASFIVMVDGENVLPMATSQDHKRVGDGDTGPNTGGMGA----------- 235 (431)
T ss_dssp HTTHH-------HHCCCCCEEEEECCC-SEEEEEEEEEESSCEEECCCBEECCEEETTTEEEECSCSEE-----------
T ss_pred HHHCC-------CCCCCCEEEEECCCC-CEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCC-----------
T ss_conf 75113-------456455576212067-53899999977995995323001522247999998898864-----------
Q ss_pred EEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCEEEECCCCCEEEEEEEEEECCC
Q ss_conf 033214445789578887887519888998859999999989999559751---02326799059967994001321573
Q gi|254781049|r 155 FKLLIDPLIGVTSEDVASLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSL---LEINPLIIMKNGRLRVLDSKISFDDN 231 (398)
Q Consensus 155 ~~~~id~~~gl~~~~~~~l~~~lg~~~~~~~~~~~ii~~L~~~f~e~Da~l---iEINPLvvt~dg~vvAlDAKi~iDDn 231 (398)
+.|.-.+++... ......++....+.+.+..... +=+. |.+|++|.+.. |.=|
T Consensus 236 ----~sp~p~~~~~l~-------------~~i~~~ii~p~~~~l~~~g~~y~GvLy~g-lMlt~~G~pkV------iEyN 291 (431)
T 3mjf_A 236 ----YSPAPVVTDDVH-------------QRVMDQVIWPTVRGMAAEGNIYTGFLYAG-LMISADGQPKV------IEFN 291 (431)
T ss_dssp ----EESCTTSCHHHH-------------HHHHHHTHHHHHHHHHHTTCCCEEEEEEE-EEECTTSCEEE------EEEC
T ss_pred ----CCCCCCCCHHHH-------------HHHHHHHCCHHHHHHHHCCCCCCCEEEEE-EEECCCCCEEE------EEEE
T ss_conf ----688987898999-------------99987500117778863599521235311-58836898789------9987
Q ss_pred HHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 5564102786310001562224
Q gi|254781049|r 232 ALYRHLDIQELRDVSEEDSREI 253 (398)
Q Consensus 232 A~fR~~~~~~~~d~~~~~~~E~ 253 (398)
+.|--|+...+....+.|..|+
T Consensus 292 ~RfGDPE~q~ll~~l~~dl~e~ 313 (431)
T 3mjf_A 292 CRFGDPETQPIMLRMRSDLVEL 313 (431)
T ss_dssp GGGSTTTHHHHHHHBCSCHHHH
T ss_pred EECCCCCHHHHHHHCCCCHHHH
T ss_conf 3037840445565316748999