HHsearch alignment for GI: 254781050 and conserved domain: CHL00194
>CHL00194 ycf39 Ycf39; Provisional.
Probab=91.76 E-value=1.1 Score=24.61 Aligned_cols=87 Identities=21% Similarity=0.164 Sum_probs=57.8
Q ss_pred EEEEECCCCHHHHHHHHHHHHHCCCCEEEEECC-CC-------CCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECCHH
Q ss_conf 399988884377999999986269818997658-99-------8868727745775314078503578863688621204
Q gi|254781050|r 10 KVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHP-KK-------GSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPS 81 (300)
Q Consensus 10 ~vivqGitg~~g~~~~~~~~~y~gt~ivagV~P-gk-------gg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~VP~~ 81 (300)
T Consensus 2 ~ILV~GATG~lGr~vVr~Ll~~-G~~Vr~lvRnp~ka~~l~~~Gve~v~gD---l~dpesl~~Al~--GvdaVi~~~~~~ 75 (319)
T CHL00194 2 SLLVIGATGTLGRQIVRRALDE-GYQVKCLVRNLRKAAFLKEWGAELVYGD---LSLPETIPPALE--GITAIIDASTSR 75 (319)
T ss_pred EEEEECCCCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHCCCEEEEEC---CCCHHHHHHHHC--CCCEEEEECCCC
T ss_conf 7999899858999999999968-8908999578676323421596799942---788778999965--996799945667
Q ss_pred ---H----------HHHHHHHHHHCCCCEEEEEC
Q ss_conf ---5----------67889999853995899805
Q gi|254781050|r 82 ---G----------AGDAIIESIEAEIPLIVCIT 102 (300)
Q Consensus 82 ---~----------v~dai~Ea~~agik~iviit 102 (300)
T Consensus 76 ~~~~~~~~~vd~~g~~~li~AAk~aGVkr~V~lS 109 (319)
T CHL00194 76 PSDLNNAYQIDLEGKLALIEAAKAAKVKRFIFFS 109 (319)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 7886208898898899999999984998899961