HHsearch alignment for GI: 254781050 and conserved domain: COG0045

>COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion].
Probab=97.58  E-value=0.0024  Score=41.63  Aligned_cols=166  Identities=19%  Similarity=0.263  Sum_probs=116.3

Q ss_pred             HHHHHHHHCCCCEEEECCCCEEECCC-C-----HHCCEE-------CC-----------------------CCCCCCCEE
Q ss_conf             99999840177189406851013555-1-----000200-------11-----------------------235778679
Q gi|254781050|r  111 VRVKARLEKSSSRLIGPNCPGILTPD-S-----CKIGIM-------PG-----------------------SIFRKGSVG  154 (300)
Q Consensus       111 ~~l~~~A~~~g~riiGPNc~Gii~p~-~-----~~lgi~-------p~-----------------------~~~~pG~Vg  154 (300)
T Consensus       180 ~~ly~~f~~~Da~lvEINPLvvt~~~g~v~aLDaKi~~DdnAlfRHp~~~~~~d~~~ed~~e~~a~~~~l~yV~LdG~IG  259 (387)
T COG0045         180 KKLYKLFVEKDATLVEINPLVVTPDGGDVLALDAKITLDDNALFRHPDLAELRDESEEDPREAEASGYGLNYVELDGNIG  259 (387)
T ss_pred             HHHHHHHHHCCCCEEEEECCEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCEEEECCCEE
T ss_conf             99999999758767875250881799808997645403676434683445553233358557876127875188638378


Q ss_pred             EEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHH-HHHHHH-HHHHHH
Q ss_conf             998054147899999997199516764055674467899999999973998728899970587248-999999-998642
Q gi|254781050|r  155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE-EEAAQF-LKDEAK  232 (300)
Q Consensus       155 ivSqSG~l~~e~~~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~T~~Ivl~gEiGG~~E-~~aa~f-i~~~~~  232 (300)
T Consensus       260 ~ivNGAGLaMaTmDii~~~Gg~PANFLDvGGgA~~e-~v~~a~~~il~d~~vk~IfVNI-fGGI~rcD~vA~GIi~Al~e  337 (387)
T COG0045         260 CIVNGAGLAMATMDIVKLYGGKPANFLDVGGGATAE-RVKEAFKLILSDPNVKAIFVNI-FGGITRCDEVAEGIIAALKE  337 (387)
T ss_pred             EEECCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHH-HHHHHHHHHHCCCCCCEEEEEE-CCCCCCCHHHHHHHHHHHHH
T ss_conf             996272699999999998089974144148999988-9999999984599854899997-16867508999999999985


Q ss_pred             CCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCC--CEECCCHHHHHHHHHHHHH
Q ss_conf             26755268998430157655322001122488889999999999889--7578898999999999984
Q gi|254781050|r  233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAG--ICIAPSPARIGRSLVELLG  298 (300)
Q Consensus       233 ~~~~KPVva~~~GrtAp~g~~~gHaGAi~~~~~g~a~~k~~al~~aG--v~v~~s~~el~~~l~~~l~  298 (300)
T Consensus       338 ~~~~vPlVVRL~GtN~e~Gk~--------------------iL~esg~~i~~~~~l~~aa~k~v~~~~  385 (387)
T COG0045         338 VGVNVPLVVRLEGTNVEEGKR--------------------ILAESGLNIIAADDLDEAAEKAVELAK  385 (387)
T ss_pred             CCCCCCEEEECCCCCHHHHHH--------------------HHHHCCCCEEECCCHHHHHHHHHHHHH
T ss_conf             298888899867887899999--------------------999739940762468899999999851