HHsearch alignment for GI: 254781050 and conserved domain: COG0045
>COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion].
Probab=97.58 E-value=0.0024 Score=41.63 Aligned_cols=166 Identities=19% Similarity=0.263 Sum_probs=116.3
Q ss_pred HHHHHHHHCCCCEEEECCCCEEECCC-C-----HHCCEE-------CC-----------------------CCCCCCCEE
Q ss_conf 99999840177189406851013555-1-----000200-------11-----------------------235778679
Q gi|254781050|r 111 VRVKARLEKSSSRLIGPNCPGILTPD-S-----CKIGIM-------PG-----------------------SIFRKGSVG 154 (300)
Q Consensus 111 ~~l~~~A~~~g~riiGPNc~Gii~p~-~-----~~lgi~-------p~-----------------------~~~~pG~Vg 154 (300)
T Consensus 180 ~~ly~~f~~~Da~lvEINPLvvt~~~g~v~aLDaKi~~DdnAlfRHp~~~~~~d~~~ed~~e~~a~~~~l~yV~LdG~IG 259 (387)
T COG0045 180 KKLYKLFVEKDATLVEINPLVVTPDGGDVLALDAKITLDDNALFRHPDLAELRDESEEDPREAEASGYGLNYVELDGNIG 259 (387)
T ss_pred HHHHHHHHHCCCCEEEEECCEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCEEEECCCEE
T ss_conf 99999999758767875250881799808997645403676434683445553233358557876127875188638378
Q ss_pred EEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHH-HHHHHH-HHHHHH
Q ss_conf 998054147899999997199516764055674467899999999973998728899970587248-999999-998642
Q gi|254781050|r 155 ILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE-EEAAQF-LKDEAK 232 (300)
Q Consensus 155 ivSqSG~l~~e~~~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~T~~Ivl~gEiGG~~E-~~aa~f-i~~~~~ 232 (300)
T Consensus 260 ~ivNGAGLaMaTmDii~~~Gg~PANFLDvGGgA~~e-~v~~a~~~il~d~~vk~IfVNI-fGGI~rcD~vA~GIi~Al~e 337 (387)
T COG0045 260 CIVNGAGLAMATMDIVKLYGGKPANFLDVGGGATAE-RVKEAFKLILSDPNVKAIFVNI-FGGITRCDEVAEGIIAALKE 337 (387)
T ss_pred EEECCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHH-HHHHHHHHHHCCCCCCEEEEEE-CCCCCCCHHHHHHHHHHHHH
T ss_conf 996272699999999998089974144148999988-9999999984599854899997-16867508999999999985
Q ss_pred CCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCC--CEECCCHHHHHHHHHHHHH
Q ss_conf 26755268998430157655322001122488889999999999889--7578898999999999984
Q gi|254781050|r 233 RGRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAG--ICIAPSPARIGRSLVELLG 298 (300)
Q Consensus 233 ~~~~KPVva~~~GrtAp~g~~~gHaGAi~~~~~g~a~~k~~al~~aG--v~v~~s~~el~~~l~~~l~ 298 (300)
T Consensus 338 ~~~~vPlVVRL~GtN~e~Gk~--------------------iL~esg~~i~~~~~l~~aa~k~v~~~~ 385 (387)
T COG0045 338 VGVNVPLVVRLEGTNVEEGKR--------------------ILAESGLNIIAADDLDEAAEKAVELAK 385 (387)
T ss_pred CCCCCCEEEECCCCCHHHHHH--------------------HHHHCCCCEEECCCHHHHHHHHHHHHH
T ss_conf 298888899867887899999--------------------999739940762468899999999851