HHsearch alignment for GI: 254781050 and conserved domain: TIGR01019

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit; InterPro: IPR005810 There are four different enzymes that share a similar catalytic mechanism which involves the phosphorylation by ATP (or GTP) of a specific histidine residue in the active site. These enzymes are: ATP citrate-lyase (4.1.3.8 from EC) , the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA in many tissues, catalyzes the formation of acetyl-CoA and oxaloacetate from citrate and CoA with the concomitant hydrolysis of ATP to ADP and phosphate. ATP-citrate lyase is a tetramer of identical subunits; Succinyl-CoA ligase (GDP-forming) (6.2.1.4 from EC) is a mitochondrial enzyme that catalyzes the substrate level phosphorylation step of the tricarboxylic acid cycle: the formation of succinyl-CoA from succinate with a concomitant hydrolysis of GTP to GDP and phosphate. This enzyme is a dimer composed of an alpha and a beta subunits; Succinyl-CoA ligase (ADP-forming) (6.2.1.5 from EC) is a bacterial enzyme that during aerobic metabolism functions in the citric acid cycle, coupling the hydrolysis of succinyl-CoA to the synthesis of ATP. It can also function in the other direction for anabolic purposes. This enzyme is a tetramer composed of two alpha and two beta subunits; and Malate-CoA ligase (6.2.1.9 from EC) (malyl-CoA synthetase) , is a bacterial enzyme that forms malyl-CoA from malate and CoA with the concomitant hydrolysis of ATP to ADP and phosphate. Malate-CoA ligase is composed of two different subunits. This entry corresponds to two regions, a glycine-rich conserved region, located in the second half of ATP citrate lyase and in the alpha subunits of succinyl-CoA ligases and malate-CoA ligase; and the active site phosphorylated histidine residue, which is located some 50 residues to the C-terminal of the first region. ; GO: 0003824 catalytic activity, 0008152 metabolic process.
Probab=100.00  E-value=0  Score=459.56  Aligned_cols=286  Identities=64%  Similarity=1.074  Sum_probs=279.5

Q ss_pred             EEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECCHHH
Q ss_conf             67717973999888843779999999862698189976589988687277457753140785035788636886212045
Q gi|254781050|r    3 ILVDKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSG   82 (300)
Q Consensus         3 il~~~~t~vivqGitg~~g~~~~~~~~~y~gt~ivagV~Pgkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~VP~~~   82 (300)
T Consensus         1 ~~~~~~~~~~~~g~~g~~g~~~~~~~~~~-g~~~~gg~~pg~gg~~~~~----~p~~~~~~~~~~~~~~~~~~~~~p~~~   75 (288)
T TIGR01019         1 ILLDKDTKVIVQGITGKQGSFHTEQLLAY-GTNIVGGVTPGKGGTEVLG----LPVFDSVKEAVEETGANASVIFVPPPF   75 (288)
T ss_pred             CCCCCCCCEEEEECCCCCCCHHHHHHHHH-CCHHCCCCCCCCCCCEEEC----CCCHHHHHHHHHHCCCCEEEEEECCCH
T ss_conf             93356661467302365330236778761-2111023356767630104----541124688876418741588726630


Q ss_pred             HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCC--CCEEEECCCCEEECCCCHHCCEECCCCCCCCCEEEEEECC
Q ss_conf             67889999853995899805884688899999984017--7189406851013555100020011235778679998054
Q gi|254781050|r   83 AGDAIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKS--SSRLIGPNCPGILTPDSCKIGIMPGSIFRKGSVGILSRSG  160 (300)
Q Consensus        83 v~dai~Ea~~agik~iviiteGip~~d~~~l~~~A~~~--g~riiGPNc~Gii~p~~~~lgi~p~~~~~pG~VgivSqSG  160 (300)
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~g~~~~~~gp~~pg~~~p~~~~~g~~p~~~~~~g~~g~~~~~g  155 (288)
T TIGR01019        76 AADAILEAIDAGLELIVCITEGIPVLDTLKVKRYLEESGHGTRLIGPNCPGVITPGECKLGILPGHIHKPGNVGLVSRSG  155 (288)
T ss_pred             HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCEEECCCCCEEEECCC
T ss_conf             23566655413640799962677605789999986414763155347787521466420000120010356400442354


Q ss_pred             CHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             14789999999719951676405567446789999999997399872889997058724899999999864226755268
Q gi|254781050|r  161 TLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEAKRGRKKPIV  240 (300)
Q Consensus       161 ~l~~e~~~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~T~~Ivl~gEiGG~~E~~aa~fi~~~~~~~~~KPVv  240 (300)
T Consensus       156 ~l~~~~~~~~~~~g~g~~~~~g~ggdp~~g~~~~~~~~~~~~d~~~~~~~~~g~~gg~~~~~~~~~~~~~----~~~p~~  231 (288)
T TIGR01019       156 TLTYEAVWQLTEAGFGQSTCVGIGGDPVNGTSFVDVLELFEEDPETEAVVLIGEIGGSAEEEAADFIKEN----LSKPVV  231 (288)
T ss_pred             CHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH----CCCCHH
T ss_conf             1257778877641266201441366544552278889875147665058886214785036789998752----144211


Q ss_pred             EEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHH
Q ss_conf             998430157655322001122488889999999999889757889899999999998
Q gi|254781050|r  241 GFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLVELL  297 (300)
Q Consensus       241 a~~~GrtAp~g~~~gHaGAi~~~~~g~a~~k~~al~~aGv~v~~s~~el~~~l~~~l  297 (300)
T Consensus       232 ~~~~g~~~p~g~~~g~~g~~~~g~~g~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~l  288 (288)
T TIGR01019       232 GFIAGLTAPPGKRLGHAGAIISGGKGTAESKIEALEAAGVTVGKSPSDIGELLAELL  288 (288)
T ss_pred             HHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHC
T ss_conf             111023467543233333022167552467888887515211112567789998619