HHsearch alignment for GI: 254781050 and conserved domain: TIGR02124

>TIGR02124 hypE hydrogenase expression/formation protein HypE; InterPro: IPR011854 This family contains HypE (or HupE), a protein required for expression of catalytically active hydrogenase in many systems. It appears to be an accessory protein involved in maturation rather than a regulatory protein involved in expression. HypE shows considerable homology to the thiamine-monophosphate kinase ThiL (IPR006283 from INTERPRO) and other enzymes..
Probab=94.31  E-value=0.27  Score=28.62  Aligned_cols=102  Identities=21%  Similarity=0.368  Sum_probs=67.9

Q ss_pred             CCEEEEECCCCCHHHHHH----HHHHHHCCCCEEEECCC-----------------CEEECCCC-HHCCEECCCCCCCCC
Q ss_conf             958998058846888999----99984017718940685-----------------10135551-000200112357786
Q gi|254781050|r   95 IPLIVCITEGIPVLDMVR----VKARLEKSSSRLIGPNC-----------------PGILTPDS-CKIGIMPGSIFRKGS  152 (300)
Q Consensus        95 ik~iviiteGip~~d~~~----l~~~A~~~g~riiGPNc-----------------~Gii~p~~-~~lgi~p~~~~~pG~  152 (300)
T Consensus        94 Ls~gfIlEEGfp~e~L~~iv~Sm~~~A~~aGV~iV~GDTKVV~kG~~D~iFINTtGiG~~~~~~v~~---~~~~~~~~GD  170 (345)
T TIGR02124        94 LSCGFILEEGFPIEDLERIVKSMAEAARKAGVKIVAGDTKVVEKGKVDGIFINTTGIGVVPSGGVID---ISAHNIQPGD  170 (345)
T ss_pred             HCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCC---CCCCCCCCCC
T ss_conf             5072013407876789999999999999739768975735334577560588138888874784337---6535414576


Q ss_pred             EEEEEECCCHHHHHH-HHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             799980541478999-99997199516764055674467899999999973998
Q gi|254781050|r  153 VGILSRSGTLTYEAV-FQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEA  205 (300)
Q Consensus       153 VgivSqSG~l~~e~~-~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~  205 (300)
T Consensus       171 ~Ii~s--G~iG~HG~~Il~~Regl~f~~~i~SDCapL~~l----v~~ll~~~g~  218 (345)
T TIGR02124       171 VIIVS--GSIGDHGAAILAVREGLGFETNIESDCAPLNGL----VEALLAVGGY  218 (345)
T ss_pred             EEEEC--CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH----HHHHHHCCCC
T ss_conf             68981--684067899887650255256733327765899----9999843798