HHsearch results for GI: 254781050 and protein with PDBid: 1iuk_A
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=99.44 E-value=2.1e-13 Score=104.49 Aligned_cols=114 Identities=16% Similarity=0.217 Sum_probs=95.0
Q ss_pred CEEEEECCC---CHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECCHHHHHH
Q ss_conf 739998888---43779999999862698189976589988687277457753140785035788636886212045678
Q gi|254781050|r 9 TKVLVQGLT---GKAGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGD 85 (300)
Q Consensus 9 t~vivqGit---g~~g~~~~~~~~~y~gt~ivagV~Pgkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~VP~~~v~d 85 (300)
.++.|-|.+ ++.|....++++.+ |-+ +..|+|.-.++++.| .|+|.|+.|.++. +|++++|+|+..+++
T Consensus 14 ksIAVVGaS~~~~k~g~~v~~~L~~~-g~~-~~~v~p~~~~~~i~g----~~~~~sl~dip~~--vDlv~i~vp~~~v~~ 85 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQ-GYR-VLPVNPRFQGEELFG----EEAVASLLDLKEP--VDILDVFRPPSALMD 85 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT-TCE-EEEECGGGTTSEETT----EECBSSGGGCCSC--CSEEEECSCHHHHTT
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHC-CCC-EEEECCCCCCCEECC----EEECCCHHHCCCC--CCEEEEEECHHHHHH
T ss_conf 96999810699998399999999978-993-388787776535568----2720656764898--738999808899999
Q ss_pred HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEC
Q ss_conf 8999985399589980588468889999998401771894068510135
Q gi|254781050|r 86 AIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGPNCPGILT 134 (300)
Q Consensus 86 ai~Ea~~agik~iviiteGip~~d~~~l~~~A~~~g~riiGPNc~Gii~ 134 (300)
++.||++.|++. +++..|+-.. ++.++|+++|+++|+|||+++--
T Consensus 86 ~v~e~~~~g~~~-v~~q~G~~~~---e~~~~a~~~Gi~vI~~~C~~ve~ 130 (140)
T 1iuk_A 86 HLPEVLALRPGL-VWLQSGIRHP---EFEKALKEAGIPVVADRCLMVEH 130 (140)
T ss_dssp THHHHHHHCCSC-EEECTTCCCH---HHHHHHHHTTCCEEESCCHHHHH
T ss_pred HHHHHHHCCCCE-EEECCCCCCH---HHHHHHHHCCCEEECCCCCHHHH
T ss_conf 999999629898-9989896899---99999999599799289427699