HHsearch results for GI: 254781050 and protein with PDBid: 2csu_A
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii OT3} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=100.00 E-value=0 Score=402.17 Aligned_cols=273 Identities=23% Similarity=0.350 Sum_probs=233.9
Q ss_pred CEEEEECCCEEEEECCCCH---HHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEE
Q ss_conf 9567717973999888843---7799999998626981899765899886872774577531407850357886368862
Q gi|254781050|r 1 MSILVDKNTKVLVQGLTGK---AGTFHTEQAILYCQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIY 77 (300)
Q Consensus 1 msil~~~~t~vivqGitg~---~g~~~~~~~~~y~gt~ivagV~Pgkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~ 77 (300)
|.-|++..| |.|-|.+.+ .|....++.+++ ++.-+..|||+. .++.| +|+|+|++|.++. +|++||+
T Consensus 2 L~~Lf~P~S-IAvVGaS~~~~~~g~~~~~~l~~~-~~G~i~~Vnp~~--~~i~G----~~~y~sl~dlp~~--~Dlavi~ 71 (457)
T 2csu_A 2 LDYFFNPKG-IAVIGASNDPKKLGYEVFKNLKEY-KKGKVYPVNIKE--EEVQG----VKAYKSVKDIPDE--IDLAIIV 71 (457)
T ss_dssp CCTTTSCSE-EEEETCCSCTTSHHHHHHHHHTTC-CSSEEEEECSSC--SEETT----EECBSSTTSCSSC--CSEEEEC
T ss_pred CHHHCCCCE-EEEECCCCCCCCCHHHHHHHHHHC-CCCCEEEECCCC--CEECC----EECCCCHHHCCCC--CCEEEEE
T ss_conf 045279986-999886799986189999999857-996099978998--70798----7687998886999--8989999
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCH------HHHHHHHHHHHCCCCEEEECCCCEEECCCCHHCCEECCCCCCCC
Q ss_conf 120456788999985399589980588468------88999999840177189406851013555100020011235778
Q gi|254781050|r 78 VPPSGAGDAIIESIEAEIPLIVCITEGIPV------LDMVRVKARLEKSSSRLIGPNCPGILTPDSCKIGIMPGSIFRKG 151 (300)
Q Consensus 78 VP~~~v~dai~Ea~~agik~iviiteGip~------~d~~~l~~~A~~~g~riiGPNc~Gii~p~~~~lgi~p~~~~~pG 151 (300)
||++++++++.||+++|+|.++|+|+||++ +++++++++|+++|+|++||||+|+++|. .++.+.+...++||
T Consensus 72 vp~~~v~~~~~e~~~~gv~~~vi~s~Gf~e~~~~g~~~~~~l~~~a~~~g~riiGPNc~G~i~~~-~~~~~~~~~~~~~G 150 (457)
T 2csu_A 72 VPKRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNCVGIMNTH-VDLNATFITVAKKG 150 (457)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEECSSCCEEEEGG-GTEEEESSCCCEEC
T ss_pred ECHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCC-CCCCCCCCCCCCCC
T ss_conf 57788899999999759988997166665322212468999999887569779636866630663-12466544316999
Q ss_pred CEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 67999805414789999999719951676405567446789999999997399872889997058724899999999864
Q gi|254781050|r 152 SVGILSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAEEEAAQFLKDEA 231 (300)
Q Consensus 152 ~VgivSqSG~l~~e~~~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~T~~Ivl~gEiGG~~E~~aa~fi~~~~ 231 (300)
+||+|||||++++++++|+.++|+|||++||+||+. ++++.|+|+||.+||+|++|++|.|-.+. ..+|++.++
T Consensus 151 ~ialvsqSG~l~~~i~~~~~~~g~G~s~~vs~Gn~~--~v~~~d~l~~l~~D~~t~~I~l~~E~~~~----~~~f~~aa~ 224 (457)
T 2csu_A 151 NVAFISQSGALGAGIVYKTIKEDIGFSKFISVGNMA--DVDFAELMEYLADTEEDKAIALYIEGVRN----GKKFMEVAK 224 (457)
T ss_dssp SEEEEESCHHHHHHHHHHHHHTTCEESEEEECTTCC--SSCHHHHHHHHTTCSSCCEEEEEESCCSC----HHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCC--CCCHHHHHHHHCCCCCCCEEEEEEECCCC----HHHHHHHHH
T ss_conf 779996672599999999996488814898348867--87889999996069987479999955755----789999999
Q ss_pred HCCCCCCEEEEEEEECCCCCC-CCCEEEEECCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHH
Q ss_conf 226755268998430157655-322001122488889999999999889757889899999999
Q gi|254781050|r 232 KRGRKKPIVGFVAGKTAPPGR-TMGHAGAVISGGKGGAEDKINAMKEAGICIAPSPARIGRSLV 294 (300)
Q Consensus 232 ~~~~~KPVva~~~GrtAp~g~-~~gHaGAi~~~~~g~a~~k~~al~~aGv~v~~s~~el~~~l~ 294 (300)
+...+||||++|.|||.+..+ ..+|||+++ ++...+.++|||+|++++++++||.+.++
T Consensus 225 ~a~~~kpvvvlk~Grs~~g~~aa~shtgala----g~~~~~~a~~~~~Gvv~v~~~~el~d~~~ 284 (457)
T 2csu_A 225 RVTKKKPIIALKAGKSESGARAASSHTGSLA----GSWKIYEAAFKQSGVLVANTIDEMLSMAR 284 (457)
T ss_dssp HHHHHSCEEEEECC----------------------CHHHHHHHHHHTTCEEESSHHHHHHHHT
T ss_pred HHHCCCCEEEEECCCCCCCCCCCCCCCCCCC----CHHHHHHHHHHHCCCCCCCCHHHHHHHHH
T ss_conf 9866899899957777655322135554345----73899999999559872799999999999