HHsearch results for GI: 254781050 and protein with PDBid: 2fp4_B
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=97.54 E-value=0.0024 Score=40.33 Aligned_cols=166 Identities=17% Similarity=0.174 Sum_probs=110.5
Q ss_pred HHHHHHHHCCCCEEEECCCCEEECCCC-----HHCCEEC------------------------------CCCCCCCCEEE
Q ss_conf 999998401771894068510135551-----0002001------------------------------12357786799
Q gi|254781050|r 111 VRVKARLEKSSSRLIGPNCPGILTPDS-----CKIGIMP------------------------------GSIFRKGSVGI 155 (300)
Q Consensus 111 ~~l~~~A~~~g~riiGPNc~Gii~p~~-----~~lgi~p------------------------------~~~~~pG~Vgi 155 (300)
..|.+.-.++...++==|=+.+..-++ +++.+-. ..+--.|+||+
T Consensus 189 ~~Ly~~F~e~Da~LlEINPLv~t~~g~~~aLDaK~~iDDnA~fR~~~~~~~~d~~~~~~~E~~a~~~~l~yv~ldG~Ig~ 268 (395)
T 2fp4_B 189 KKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIAC 268 (395)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEECTTSCEEECSEEEEECGGGGGGCHHHHTTCCCTTSCHHHHHHHHTTCEEEECSSSEEE
T ss_pred HHHHHHHHHCCCCEEEECCEEECCCCCEEEEEEEECCCCCHHHHCCCHHHCCCCCCCCHHHHHHHHCCCCEEECCCCEEE
T ss_conf 99999998568230660114886999879722462246565653532121367755997789998759866514782789
Q ss_pred EEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHH-HHHHH-HHHHHHHC
Q ss_conf 98054147899999997199516764055674467899999999973998728899970587248-99999-99986422
Q gi|254781050|r 156 LSRSGTLTYEAVFQTSQEGLGQSTAVGIGGDPVKGTEFIDVLELFLADEATESIVMVGEIGGSAE-EEAAQ-FLKDEAKR 233 (300)
Q Consensus 156 vSqSG~l~~e~~~~~~~~g~G~S~~VsiG~D~~~G~~~~d~L~~~~~Dp~T~~Ivl~gEiGG~~E-~~aa~-fi~~~~~~ 233 (300)
+.-.++|+...++.+...|---.-+.-+||.+.. ....+.++.+..||+.|+|++-. .||... .+.|+ .+++.+..
T Consensus 269 ~vnGaGLaMaTmD~i~~~Gg~pANFlD~GG~a~~-e~v~~a~~iil~d~~vk~iliNI-fGGI~~cd~vA~GIi~A~~e~ 346 (395)
T 2fp4_B 269 FVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKE-SQVYQAFKLLTADPKVEAILVNI-FGGIVNCAIIANGITKACREL 346 (395)
T ss_dssp EESSHHHHHHHHHHHHHTTCCBCEEEECCSSCCH-HHHHHHHHHHHHCTTCCEEEEEE-EESSSCHHHHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCH-HHHHHHHHHHHCCCCCCEEEEEE-ECCCCCHHHHHHHHHHHHHHC
T ss_conf 8437642110257898715773315641788878-99999999996399987899998-087303599999999999961
Q ss_pred CCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCC--EECCCHHHHHHHHHHHHH
Q ss_conf 67552689984301576553220011224888899999999998897--578898999999999984
Q gi|254781050|r 234 GRKKPIVGFVAGKTAPPGRTMGHAGAVISGGKGGAEDKINAMKEAGI--CIAPSPARIGRSLVELLG 298 (300)
Q Consensus 234 ~~~KPVva~~~GrtAp~g~~~gHaGAi~~~~~g~a~~k~~al~~aGv--~v~~s~~el~~~l~~~l~ 298 (300)
..+.|||+-..|.....|+ +.|+++|. ..+++++|-.....+++.
T Consensus 347 ~~~vpivVRl~Gtn~~eg~--------------------~iL~~sgl~i~~~~~l~~A~~kaV~~~~ 393 (395)
T 2fp4_B 347 ELKVPLVVRLEGTNVHEAQ--------------------NILTNSGLPITSAVDLEDAAKKAVASVT 393 (395)
T ss_dssp TCCSCEEEEEEETTHHHHH--------------------HHHHHTCSCCEECSSHHHHHHHHHHTTC
T ss_pred CCCCCEEEECCCCCHHHHH--------------------HHHHHCCCCEEEECCHHHHHHHHHHHHH
T ss_conf 9998789999989989999--------------------9999779974874899999999999963