HHsearch results for GI: 254781050 and protein with PDBid: 3doj_A
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.45 E-value=0.74 Score=24.40 Aligned_cols=112 Identities=13% Similarity=0.064 Sum_probs=76.6
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHCCCCE-EEEECCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECCHHHHHHHH
Q ss_conf 7399988884377999999986269818-997658998868727745775314078503578863688621204567889
Q gi|254781050|r 9 TKVLVQGLTGKAGTFHTEQAILYCQTQV-VGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGDAI 87 (300)
Q Consensus 9 t~vivqGitg~~g~~~~~~~~~y~gt~i-vagV~Pgkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~VP~~~v~dai 87 (300)
.||-+.|+ |.-|+--+++.++- |.+| |.-.+|.|-.+.. ..+.-+++|..|+.+. +|+-++++|.......+
T Consensus 22 mkIg~IGl-G~MG~~mA~~L~~~-g~~v~v~dr~~~~~~~~~---~~ga~~~~s~~e~~~~--~d~vi~~l~~~~a~~~v 94 (310)
T 3doj_A 22 MEVGFLGL-GIMGKAMSMNLLKN-GFKVTVWNRTLSKCDELV---EHGASVCESPAEVIKK--CKYTIAMLSDPCAALSV 94 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT-TCEEEEECSSGGGGHHHH---HTTCEECSSHHHHHHH--CSEEEECCSSHHHHHHH
T ss_pred CEEEEECH-HHHHHHHHHHHHHC-CCEEEEECCCHHHHHHHH---HCCCEECCCHHHHHHC--CCCEEEECCCCCCEEEE
T ss_conf 87978716-88999999999978-993899869999999999---8699682899999845--88449840575302563
Q ss_pred HHHH----HC-CCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 9998----53-9958998058846888999999840177189406
Q gi|254781050|r 88 IESI----EA-EIPLIVCITEGIPVLDMVRVKARLEKSSSRLIGP 127 (300)
Q Consensus 88 ~Ea~----~a-gik~iviiteGip~~d~~~l~~~A~~~g~riiGP 127 (300)
..-. +. .-..+++.+.-......+++.+.++++|++.+--
T Consensus 95 ~~~~~~~~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~lda 139 (310)
T 3doj_A 95 VFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEG 139 (310)
T ss_dssp HHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred ECCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 013201554235898899568763777899999998449769963