HHsearch results for GI: 254781050 and protein with PDBid: 3gdo_A
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.68 E-value=0.00023 Score=46.72 Aligned_cols=119 Identities=14% Similarity=0.111 Sum_probs=82.9
Q ss_pred CCEEEEECCCCHHHHH-HHHHHHHH-CCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECCHHHHHH
Q ss_conf 9739998888437799-99999862-698189976589988687277457753140785035788636886212045678
Q gi|254781050|r 8 NTKVLVQGLTGKAGTF-HTEQAILY-CQTQVVGGIHPKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGAGD 85 (300)
Q Consensus 8 ~t~vivqGitg~~g~~-~~~~~~~y-~gt~ivagV~Pgkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~VP~~~v~d 85 (300)
.=|+.+.|. |..|.. |... +.. .+..|++ |...+- +.+.-+.-..++|.+..|+.+..++|+.+|++|+..-.+
T Consensus 5 ~ikigiIG~-G~~~~~~~~~~-~~~~~~~~l~~-v~~~~~-~~~~~~~~~~~~~~s~~ell~~~~~DaV~i~tp~~~H~~ 80 (358)
T 3gdo_A 5 TIKVGILGY-GLSGSVFHGPL-LDVLDEYQISK-IMTSRT-EEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYE 80 (358)
T ss_dssp CEEEEEECC-SHHHHHTTHHH-HTTCTTEEEEE-EECSCH-HHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHHH
T ss_pred CCEEEEEEC-CHHHHHHHHHH-HHCCCCCEEEE-EECCCH-HHHHHHCCCCCEECCHHHHHCCCCCCEEEECCCHHHHHH
T ss_conf 867999909-69999999999-82389908999-948899-999986799835399999965999999998897688999
Q ss_pred HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEE-EECCCC
Q ss_conf 899998539958998058846888999999840177189-406851
Q gi|254781050|r 86 AIIESIEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRL-IGPNCP 130 (300)
Q Consensus 86 ai~Ea~~agik~iviiteGip~~d~~~l~~~A~~~g~ri-iGPNc~ 130 (300)
.+.+|+++|...++==.-.....+..+|++.+++++..+ +|-|..
T Consensus 81 ~~~~al~~gk~V~~EKPla~~~~ea~~l~~~a~~~~~~~~v~~~~r 126 (358)
T 3gdo_A 81 HTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRR 126 (358)
T ss_dssp HHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGG
T ss_pred HHHHHHHCCCEEEEECEEHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_conf 9999986599898612000103678999998762451565410001