HHsearch results for GI: 254781050 and protein with PDBid: 3nkl_A
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=94.66 E-value=0.14 Score=28.92 Aligned_cols=92 Identities=15% Similarity=0.117 Sum_probs=55.6
Q ss_pred ECCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEC--CCCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECCHHHH
Q ss_conf 179739998888437799999998626981899765--899886872774577531407850357886368862120456
Q gi|254781050|r 6 DKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIH--PKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGA 83 (300)
Q Consensus 6 ~~~t~vivqGitg~~g~~~~~~~~~y~gt~ivagV~--Pgkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~VP~~~v 83 (300)
|...||++.|.. ..|..-.+....-..-+++|.+. |.+-|..+.| +|||.+ .+.
T Consensus 2 n~k~rvlI~Gag-~~g~~l~~~l~~~~~y~vvgfiD~d~~~~g~~i~g----i~V~~~-~~l------------------ 57 (141)
T 3nkl_A 2 NAKKKVLIYGAG-SAGLQLANMLRQGKEFHPIAFIDDDRKKHKTTMQG----ITIYRP-KYL------------------ 57 (141)
T ss_dssp -CCEEEEEECCS-HHHHHHHHHHHHSSSEEEEEEECSCGGGTTCEETT----EEEECG-GGH------------------
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECC----CCCCCH-HHH------------------
T ss_conf 987779998779-89999999998789966999995786414148678----203668-787------------------
Q ss_pred HHHHHHH-HHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 7889999-85399589980588468889999998401771894
Q gi|254781050|r 84 GDAIIES-IEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLI 125 (300)
Q Consensus 84 ~dai~Ea-~~agik~iviiteGip~~d~~~l~~~A~~~g~rii 125 (300)
.+. -+..+..+++.....+.....++...|++.++++.
T Consensus 58 ----~~~i~~~~i~~viia~p~~~~~~~~~l~~~~~~~~i~i~ 96 (141)
T 3nkl_A 58 ----ERLIKKHCISTVLLAVPSASQVQKKVIIESLAKLHVEVL 96 (141)
T ss_dssp ----HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHTTTCEEE
T ss_pred ----HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEE
T ss_conf ----788864686389994588899999999998750597237