HHsearch results for GI: 254781050 and protein with PDBid: 3nkl_A

>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=94.66  E-value=0.14  Score=28.92  Aligned_cols=92  Identities=15%  Similarity=0.117  Sum_probs=55.6

Q ss_pred             ECCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEC--CCCCCEEECCCCCCCCCCCCHHHHCCCCCCCEEEEECCHHHH
Q ss_conf             179739998888437799999998626981899765--899886872774577531407850357886368862120456
Q gi|254781050|r    6 DKNTKVLVQGLTGKAGTFHTEQAILYCQTQVVGGIH--PKKGSTYWTGGNVNVPVFTTVAEAKERTAANASVIYVPPSGA   83 (300)
Q Consensus         6 ~~~t~vivqGitg~~g~~~~~~~~~y~gt~ivagV~--Pgkgg~~~~g~~~~iPvy~sv~ea~~~~~~D~avI~VP~~~v   83 (300)
                      |...||++.|.. ..|..-.+....-..-+++|.+.  |.+-|..+.|    +|||.+ .+.                  
T Consensus         2 n~k~rvlI~Gag-~~g~~l~~~l~~~~~y~vvgfiD~d~~~~g~~i~g----i~V~~~-~~l------------------   57 (141)
T 3nkl_A            2 NAKKKVLIYGAG-SAGLQLANMLRQGKEFHPIAFIDDDRKKHKTTMQG----ITIYRP-KYL------------------   57 (141)
T ss_dssp             -CCEEEEEECCS-HHHHHHHHHHHHSSSEEEEEEECSCGGGTTCEETT----EEEECG-GGH------------------
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECC----CCCCCH-HHH------------------
T ss_conf             987779998779-89999999998789966999995786414148678----203668-787------------------


Q ss_pred             HHHHHHH-HHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf             7889999-85399589980588468889999998401771894
Q gi|254781050|r   84 GDAIIES-IEAEIPLIVCITEGIPVLDMVRVKARLEKSSSRLI  125 (300)
Q Consensus        84 ~dai~Ea-~~agik~iviiteGip~~d~~~l~~~A~~~g~rii  125 (300)
                          .+. -+..+..+++.....+.....++...|++.++++.
T Consensus        58 ----~~~i~~~~i~~viia~p~~~~~~~~~l~~~~~~~~i~i~   96 (141)
T 3nkl_A           58 ----ERLIKKHCISTVLLAVPSASQVQKKVIIESLAKLHVEVL   96 (141)
T ss_dssp             ----HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHTTTCEEE
T ss_pred             ----HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEE
T ss_conf             ----788864686389994588899999999998750597237