HHsearch alignment for GI: 254781051 and conserved domain: PRK12315
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.
Probab=99.24 E-value=7.9e-07 Score=71.34 Aligned_cols=409 Identities=17% Similarity=0.175 Sum_probs=234.2
Q ss_pred CCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCC
Q ss_conf 73100044553236777764166654455565445404788862575333467258876451067744365799984160
Q gi|254781051|r 333 SHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQ 412 (957)
Q Consensus 333 SHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQ 412 (957)
T Consensus 113 G~~g~gls~avGmA~A~~~~~------------~~~~v~~v~--GDG~l~-eG~~~EA~~~Ag~~--~-~nlivi~ddN~ 174 (581)
T PRK12315 113 GHTSTSIALATGMAKARDLKG------------EKENIIAVI--GDGSLS-GGLAFEGLNNAAEL--K-SNLIIIVNDNQ 174 (581)
T ss_pred CCCHHHHHHHHHHHHHHHHHC------------CCCCEEEEE--CCCHHH-HHHHHHHHHHHCCC--C-CCEEEEEECCC
T ss_conf 763789999999999999729------------998489998--551344-01679998763458--9-85599997688
Q ss_pred EECCCC-------CHHCCCC--CCCCHHHHHHCCCEEEE-CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
Q ss_conf 201247-------0102467--78400112203405874-2678899999999999999973897399864211256564
Q gi|254781051|r 413 IGFTTN-------PSSARSC--TYASDISKSIGIPIFHV-NGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNE 482 (957)
Q Consensus 413 IGFTT~-------p~d~RSs--~Y~TDiAK~i~aPI~HV-N~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE 482 (957)
T Consensus 175 isI~~~~~~~~~~~~~~~~~~~~~~~~~fe~~G~~~~~v~DGhd~~~i~~al~~ak----~~~~P~~I~v~T~kG~G~~- 249 (581)
T PRK12315 175 MSIAENHGGLYKNLKELRDTNGQSENNLFKAMGLDYRYVEDGNDLESLIELFKEVK----DIDHPIVLHIHTLKGKGYK- 249 (581)
T ss_pred EEECCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHH----HCCCCEEEEEEECCCCCCC-
T ss_conf 02358730777777887750375501069984986882579999999999999986----3699979999967863666-
Q ss_pred CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 35422355788888671899899999998644898989999999999999775666541258765666656862666778
Q gi|254781051|r 483 GDEPSFTQPMMYKTIRSHKSVLQLYADSLMKNQVISKQELQSLANNWHKYLEAEYKESESYCPEKLGLLHNGENERKNSV 562 (957)
Q Consensus 483 ~DeP~fTQP~mY~~I~~hp~v~~~Y~~~Li~~g~it~~e~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~~~~~T~v 562 (957)
T Consensus 250 ---~a~~~~~~~-----H~-----------------------------------------~~pf----------~~~~g~ 270 (581)
T PRK12315 250 ---PAEENKEAF-----HW-----------------------------------------HMPF----------DLETGQ 270 (581)
T ss_pred ---CCCCHHHHH-----CC-----------------------------------------CCCC----------CCCCCC
T ss_conf ---110357763-----66-----------------------------------------5676----------613465
Q ss_pred CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEE
Q ss_conf 99999999887436899862056778889989987334356421147898889886358315785010022333230279
Q gi|254781051|r 563 SKEILKKIGSSIIRLPKSFNTHKIVERLMANRQKMIETGKGIDWSMAESLAFGSLCYEGYKVRLSGQDCERGTFSHRHAI 642 (957)
Q Consensus 563 ~~~~L~~i~~~l~~~Pe~f~~h~~v~k~~~~R~~~~~~~~~iDW~~AE~LA~~SLl~eG~~VRlsGQD~~RGTFshRHav 642 (957)
T Consensus 271 ~~------------~~~~~----------------------~~~~~~~~~~l~~~~~~~~~ivai~a~~~~~~g------ 310 (581)
T PRK12315 271 SK------------VPASG----------------------ESYSSVVLDYLLKKIEEGKPVVAINAAIPGVFG------ 310 (581)
T ss_pred CC------------CCCCC----------------------CCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC------
T ss_conf 45------------67875----------------------698999999999998746441542135787657------
Q ss_pred EEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 99778884455634427898459998243111101343202211386531110000244245410225655420257623
Q gi|254781051|r 643 LCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGYSLNNLNALTIWEAQFGDFANGAQVILDQFITAGEQKWL 722 (957)
Q Consensus 643 l~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~p~~L~iWEAQFGDF~NgAQviiDqfiss~e~KW~ 722 (957)
T Consensus 311 ---------l~~f~~~~--P~R~--i~~GIaEq~mv~~a~GlA~~---G~~P~~~~fstFl~---ra~dqi~~dia---l 368 (581)
T PRK12315 311 ---------LKEFRKKY--PDRY--VDVGIAEQHSVAFASGMAAA---GARPVIFVNSTFLQ---RAYDQLSHDLA---I 368 (581)
T ss_pred ---------CCHHHHHC--CCCE--EECCHHHHHHHHHHHHHHHC---CCEEEEEEECHHHH---HHHHHHHHHHH---H
T ss_conf ---------53132418--5016--75160888999998789757---99646888442331---46889989999---8
Q ss_pred CCCCCEEECCCC-CCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCC
Q ss_conf 336813543688-8888876564405788752143782697248899999999997435348868985660221080126
Q gi|254781051|r 723 CTSNLVCLLPHG-YEGQGPEHSSARLERFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVV 801 (957)
Q Consensus 723 ~~sglvllLPHG-yeGqGPEHSSaRlERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~ 801 (957)
T Consensus 369 ~~lpv~~~~~~~~igedGpTHq~--iedia~lR~iPN~~V~~PaD~~E~~~~~~~Al~~-~~gP~~iR~pr~~~~~~~-- 443 (581)
T PRK12315 369 NNNPAVMIVFGGSISGNSVTHQG--SFDIAMISNIPNLVYLAPTSKEELIAMLEWALTQ-HEHPVAIRVPEHVLESGP-- 443 (581)
T ss_pred HCCCEEEEEECCCCCCCCCCCCC--HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCCC--
T ss_conf 36998999961777899987514--7788997256883899319999999999999971-699589993787677787--
Q ss_pred CCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHCC---CCCEEEEEEECCCCCHHHH
Q ss_conf 8878937998603515776433444544457954576899868857899999999769---9868999840148682899
Q gi|254781051|r 802 SSLSDMTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRRVILCTGKVYYDLLDNRDMRN---IADIYLLRIEQLYPFPEDY 878 (957)
Q Consensus 802 S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~rvi~csGKvyydL~~~r~~~~---~~~vaivRiEqLyPfP~~~ 878 (957)
T Consensus 444 ~~~~~~~~g~-~-~v~~~--------------G~--dv~Iia~Gs~v~~A~~aa~~L~~~~gI~~~Vi~~~~vkPlD~~~ 505 (581)
T PRK12315 444 TVDTDYSTLN-Y-EVAKA--------------GE--KVAILALGDFYELGEKVAKKLKEKLGIDATLINPKFITGLDEEL 505 (581)
T ss_pred CCCCCCCCCC-E-EEEEC--------------CC--CEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHH
T ss_conf 6555555441-8-99755--------------89--88999860778999999999875129987999577248879999
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCCC-HHHHHHHH
Q ss_conf 9999853799839980678531784-57899769
Q gi|254781051|r 879 LIKVLSRFVQAEIVWCQEEPQNMGA-WTFIEPYL 911 (957)
Q Consensus 879 l~~~l~~y~~~e~vW~QEEp~N~Ga-W~~v~~rl 911 (957)
T Consensus 506 l~~~~~~~---~~ivtvEeh~~~GGlGs~v~~~l 536 (581)
T PRK12315 506 LENLKEDH---ELVVTLEDGILDGGFGEKIARYY 536 (581)
T ss_pred HHHHHHCC---CEEEEEECCCCCCCHHHHHHHHH
T ss_conf 99998249---87999927976645899999999