HHsearch alignment for GI: 254781051 and conserved domain: TIGR00553
>TIGR00553 pabB para-aminobenzoate synthase, component I; InterPro: IPR005802 Para-aminobenzoate synthase component I (pabB) is closely related to anthranilate synthase component I (trpE). The apparent orthologs of pabB in Aquifex aeolicus and Helicobacter pylori score well below most TrpE proteins because of a different architecture, in which the less strongly conserved N-terminal domain is absent. The noise cut off is set to exclude most examples of TrpE.; GO: 0009396 folic acid and derivative biosynthetic process.
Probab=90.37 E-value=0.081 Score=33.43 Aligned_cols=35 Identities=23% Similarity=0.409 Sum_probs=30.3
Q ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHH----HHCCCEEE
Q ss_conf 171572566578777789999999998----40643027
Q gi|254781051|r 145 YDRKICMKGVLGLESATIPEIVDVLSH----LYCSNIGV 179 (957)
Q Consensus 145 Ld~~f~~~~~~g~~~~tL~eIi~~L~~----tYCgsIGv 179 (957)
T Consensus 268 ~~AlFP~GSiTGAPK~RAMeII~elE~~~RG~YcGaiG~ 306 (368)
T TIGR00553 268 FRALFPGGSITGAPKLRAMEIIKELEKQPRGVYCGAIGY 306 (368)
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 985178887358146899999998636888951001330