HHsearch alignment for GI: 254781051 and conserved domain: cd00568

>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. These enzymes include, among others, the E1 components of the pyruvate, the acetoin and the branched chain alpha-keto acid dehydrogenase complexes.
Probab=96.73  E-value=0.01  Score=40.25  Aligned_cols=146  Identities=20%  Similarity=0.177  Sum_probs=90.4

Q ss_pred             CCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEC
Q ss_conf             43223455510015026889835961899971787731000445532367777641666544555654454047888625
Q gi|254781051|r  298 PSEKEYSGDVKYHLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHG  377 (957)
Q Consensus       298 ~~~~~~sGDVKYHLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHG  377 (957)
T Consensus        11 ~~~~ivv~d~G~~~~~~~~~~~~~~~~~~~~~~~~g~mG~~~p~AiGa~~a~p~----------------~~v--v~i~G   72 (168)
T cd00568          11 PEDAIVVNDAGNSAYWAYRYLPLRRGRRFLTSTGFGAMGYGLPAAIGAALAAPD----------------RPV--VCIAG   72 (168)
T ss_pred             CCCCEEEECCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCC----------------CEE--EEEEC
T ss_conf             999699987527699999975628999598289875377799999999987899----------------839--99977


Q ss_pred             CCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCH-----------HCCCCCCCCHHHHHHCCCEEEECCCC
Q ss_conf             7533346725887645106774436579998416020124701-----------02467784001122034058742678
Q gi|254781051|r  378 DAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPS-----------SARSCTYASDISKSIGIPIFHVNGDD  446 (957)
Q Consensus       378 DAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~-----------d~RSs~Y~TDiAK~i~aPI~HVN~Dd  446 (957)
T Consensus        73 DG~f~~~~~el~ta~~~~l~------i~~iv~nN~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~~~G~~~~~v~--~  144 (168)
T cd00568          73 DGGFMMTGQELATAVRYGLP------VIVVVFNNGGYGTIRMHQEAFYGGRVSGTDLSNPDFAALAEAYGAKGVRVE--D  144 (168)
T ss_pred             CCCCEECCHHHHHHHHCCCC------EEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEEEEC--C
T ss_conf             97421131766456531884------269999776136779999850289876565888877899997498699989--9


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             899999999999999973897399864
Q gi|254781051|r  447 PEAVIRVVRMAVSFRMKFHKSVVIDIV  473 (957)
Q Consensus       447 pEav~~~~~lA~~yR~~F~kDVvIDlv  473 (957)
T Consensus       145 ~~el~~al~~a~----~~~~p~li~V~  167 (168)
T cd00568         145 PEDLEAALAEAL----AAGGPALIEVK  167 (168)
T ss_pred             HHHHHHHHHHHH----HCCCCEEEEEE
T ss_conf             999999999998----38997899998