HHsearch alignment for GI: 254781051 and conserved domain: cd02000
>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC). PDC catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. ADC participates in the breakdown of acetoin while BCADC participates in the breakdown of branched chain amino acids. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate (branched chain 2-oxo acids derived from the transamination of leucine, valine and isoleucine).
Probab=99.89 E-value=2.4e-19 Score=166.05 Aligned_cols=287 Identities=18% Similarity=0.220 Sum_probs=225.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCC-EE---CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHHH
Q ss_conf 99999999989999986403362-22---256465899999999999873791079980676552689998853798999
Q gi|254781051|r 214 ILDKLVRAEGFEKFIDIKYKGAK-RF---GADGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVLSQIMNKLPRSI 289 (957)
Q Consensus 214 iL~~L~~Ae~FE~FL~~Kf~g~K-RF---sLEG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL~Nvl~Kp~~~i 289 (957)
T Consensus 1 ~y~~M~~~R~~e~~~~~l~~~G~~~~~~~~~~GqEa~~vg~~~~l------~~~D~~~~-~yR~~~~~la~--G~~~~~~ 71 (293)
T cd02000 1 LYRTMVLIRRFDERLLELYRQGKIGGFYHLSIGQEAVAVGVAAAL------RPGDWVFP-TYRDHGHALAR--GVDLKEM 71 (293)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC------CCCCEEEE-CCCHHHHHHHH--CCCHHHH
T ss_conf 978999999999999999978968655208787699999999868------99898981-45208999990--9999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
Q ss_conf 99855887432234555100150268898359618999717877310004455323677776416665445556544540
Q gi|254781051|r 290 FYEFKGKGPSEKEYSGDVKYHLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSR 369 (957)
Q Consensus 290 F~EF~g~~~~~~~~sGDVKYHLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~ 369 (957)
T Consensus 72 ~~e~~g~~~g~~~Gr~-gs~H~~~----------~~~~~~~~~~~vg~~~p~a~G~A~a~k~~~~--------------~ 126 (293)
T cd02000 72 LAELFGKETGPCKGRG-GSMHIGD----------KEKNFFGGNGIVGGQVPLAAGAALALKYRGE--------------D 126 (293)
T ss_pred HHHHHCCCCCCCCCCC-CCCCCCC----------CCCCEECCCCCCCCCCCHHHHHHHHHHHHCC--------------C
T ss_conf 9998257778888888-8685887----------1020504654124663347767899997589--------------9
Q ss_pred EEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCCEEEECCCCHHH
Q ss_conf 47888625753334672588764510677443657999841602012470102467784001122034058742678899
Q gi|254781051|r 370 VLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIPIFHVNGDDPEA 449 (957)
Q Consensus 370 vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aPI~HVN~DdpEa 449 (957)
T Consensus 127 ~v~v~~~GDGa~-~~G~f~EalN~A~~~~LP---vlfv~enN~yaist~~~~~~~~~~~~~r~~~~gi~~~~vDG~D~~~ 202 (293)
T cd02000 127 RVAVCFFGDGAT-NEGDFHEALNFAALWKLP---VIFVCENNGYAISTPTSRQTAGTSIADRAAAYGIPGIRVDGNDVLA 202 (293)
T ss_pred CEEEEEECCCCC-CCCHHHHHHHHHHHCCCC---EEEEEEECCEECCCCHHHHCCCCCHHHHHHHCCCCEEEECCCCHHH
T ss_conf 889997168745-514799999988653798---7999974873023568873277448773532698769974878999
Q ss_pred HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC-CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 99999999999997389739986421125656435422-35578888867189989999999864489898999999999
Q gi|254781051|r 450 VIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPS-FTQPMMYKTIRSHKSVLQLYADSLMKNQVISKQELQSLANN 528 (957)
Q Consensus 450 v~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~-fTQP~mY~~I~~hp~v~~~Y~~~Li~~g~it~~e~~~~~~~ 528 (957)
T Consensus 203 v~~~~~~Ai~~~R~~~gP~lie~~TyR~~gHs~~dd~~~YR~~~E~~~~~~-~DPi~~~~~~L~~~g~~te~~~~~i~~e 281 (293)
T cd02000 203 VYEAAKEAVERARAGGGPTLIEAVTYRLGGHSTSDDPSRYRTKEEVEEWKK-RDPILRLRKYLIEAGILTEEELAAIEAE 281 (293)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH-CCCHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 999999999998538998899998561675568898656889999998884-7919999999998799999999999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99997756665
Q gi|254781051|r 529 WHKYLEAEYKE 539 (957)
Q Consensus 529 ~~~~l~~~~~~ 539 (957)
T Consensus 282 i~~~V~~A~~~ 292 (293)
T cd02000 282 VKAEVEEAVEF 292 (293)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999951