HHsearch alignment for GI: 254781051 and conserved domain: cd02000

>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC). PDC catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. ADC participates in the breakdown of acetoin while BCADC participates in the breakdown of branched chain amino acids. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate (branched chain 2-oxo acids derived from the transamination of leucine, valine and isoleucine).
Probab=99.89  E-value=2.4e-19  Score=166.05  Aligned_cols=287  Identities=18%  Similarity=0.220  Sum_probs=225.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCC-EE---CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHHH
Q ss_conf             99999999989999986403362-22---256465899999999999873791079980676552689998853798999
Q gi|254781051|r  214 ILDKLVRAEGFEKFIDIKYKGAK-RF---GADGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVLSQIMNKLPRSI  289 (957)
Q Consensus       214 iL~~L~~Ae~FE~FL~~Kf~g~K-RF---sLEG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL~Nvl~Kp~~~i  289 (957)
T Consensus         1 ~y~~M~~~R~~e~~~~~l~~~G~~~~~~~~~~GqEa~~vg~~~~l------~~~D~~~~-~yR~~~~~la~--G~~~~~~   71 (293)
T cd02000           1 LYRTMVLIRRFDERLLELYRQGKIGGFYHLSIGQEAVAVGVAAAL------RPGDWVFP-TYRDHGHALAR--GVDLKEM   71 (293)
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC------CCCCEEEE-CCCHHHHHHHH--CCCHHHH
T ss_conf             978999999999999999978968655208787699999999868------99898981-45208999990--9999999


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
Q ss_conf             99855887432234555100150268898359618999717877310004455323677776416665445556544540
Q gi|254781051|r  290 FYEFKGKGPSEKEYSGDVKYHLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSR  369 (957)
Q Consensus       290 F~EF~g~~~~~~~~sGDVKYHLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~  369 (957)
T Consensus        72 ~~e~~g~~~g~~~Gr~-gs~H~~~----------~~~~~~~~~~~vg~~~p~a~G~A~a~k~~~~--------------~  126 (293)
T cd02000          72 LAELFGKETGPCKGRG-GSMHIGD----------KEKNFFGGNGIVGGQVPLAAGAALALKYRGE--------------D  126 (293)
T ss_pred             HHHHHCCCCCCCCCCC-CCCCCCC----------CCCCEECCCCCCCCCCCHHHHHHHHHHHHCC--------------C
T ss_conf             9998257778888888-8685887----------1020504654124663347767899997589--------------9


Q ss_pred             EEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCCEEEECCCCHHH
Q ss_conf             47888625753334672588764510677443657999841602012470102467784001122034058742678899
Q gi|254781051|r  370 VLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIPIFHVNGDDPEA  449 (957)
Q Consensus       370 vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aPI~HVN~DdpEa  449 (957)
T Consensus       127 ~v~v~~~GDGa~-~~G~f~EalN~A~~~~LP---vlfv~enN~yaist~~~~~~~~~~~~~r~~~~gi~~~~vDG~D~~~  202 (293)
T cd02000         127 RVAVCFFGDGAT-NEGDFHEALNFAALWKLP---VIFVCENNGYAISTPTSRQTAGTSIADRAAAYGIPGIRVDGNDVLA  202 (293)
T ss_pred             CEEEEEECCCCC-CCCHHHHHHHHHHHCCCC---EEEEEEECCEECCCCHHHHCCCCCHHHHHHHCCCCEEEECCCCHHH
T ss_conf             889997168745-514799999988653798---7999974873023568873277448773532698769974878999


Q ss_pred             HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC-CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             99999999999997389739986421125656435422-35578888867189989999999864489898999999999
Q gi|254781051|r  450 VIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPS-FTQPMMYKTIRSHKSVLQLYADSLMKNQVISKQELQSLANN  528 (957)
Q Consensus       450 v~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~-fTQP~mY~~I~~hp~v~~~Y~~~Li~~g~it~~e~~~~~~~  528 (957)
T Consensus       203 v~~~~~~Ai~~~R~~~gP~lie~~TyR~~gHs~~dd~~~YR~~~E~~~~~~-~DPi~~~~~~L~~~g~~te~~~~~i~~e  281 (293)
T cd02000         203 VYEAAKEAVERARAGGGPTLIEAVTYRLGGHSTSDDPSRYRTKEEVEEWKK-RDPILRLRKYLIEAGILTEEELAAIEAE  281 (293)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH-CCCHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf             999999999998538998899998561675568898656889999998884-7919999999998799999999999999


Q ss_pred             HHHHHHHHHHH
Q ss_conf             99997756665
Q gi|254781051|r  529 WHKYLEAEYKE  539 (957)
Q Consensus       529 ~~~~l~~~~~~  539 (957)
T Consensus       282 i~~~V~~A~~~  292 (293)
T cd02000         282 VKAEVEEAVEF  292 (293)
T ss_pred             HHHHHHHHHHC
T ss_conf             99999999951