HHsearch alignment for GI: 254781051 and conserved domain: cd02001

>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase). Methanococcus jannaschii sulfopyruvate decarboxylase (ComDE) is a dodecamer of six alpha (D) subunits and six (E) beta subunits which, catalyzes the decarboxylation of sulfopyruvic acid to sulfoacetaldehyde in the coenzyme M pathway. Ppyr decarboxylase is a homotrimeric enzyme which functions in the biosynthesis of C-P compounds such as bialaphos tripeptide in Streptomyces hygroscopicus. Ppyr decarboxylase and ComDE require TPP and divalent metal cation cofactors.
Probab=90.23  E-value=1.6  Score=23.70  Aligned_cols=104  Identities=11%  Similarity=0.120  Sum_probs=66.9

Q ss_pred             HCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHH---HCCCCCCCCCEEEEEECCCE
Q ss_conf             004455323677776416665445556544540478886257533346725887645---10677443657999841602
Q gi|254781051|r  337 FVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGL---SGLSGYTVAGNIHLIINNQI  413 (957)
Q Consensus       337 aVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~l---s~l~gY~tGGTiHiVvNNQI  413 (957)
T Consensus        46 ~~~~~alG~al~~p-----------------~kVi~--idGDGs~l--------M~lg~LaTi~~~~~~nl~~ivlnN~~   98 (157)
T cd02001          46 LAGSIGLGLALGLS-----------------RKVIV--VDGDGSLL--------MNPGVLLTAGEFTPLNLILVVLDNRA   98 (157)
T ss_pred             HHHHHHHHHHHCCC-----------------CCEEE--EECCHHHH--------HCCCHHHHHHHCCCCCEEEEEEECCC
T ss_conf             28899999985389-----------------96899--95755887--------52461999986389887999997975


Q ss_pred             ECCC-C-CHHCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf             0124-7-01024677840011220340587426788999999999999999738973998642
Q gi|254781051|r  414 GFTT-N-PSSARSCTYASDISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVC  474 (957)
Q Consensus       414 GFTT-~-p~d~RSs~Y~TDiAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~  474 (957)
T Consensus        99 ~~s~GgQ~t~~-~~~df~~iA~a~G~~~~~v--~~~~el~~al~~~l----~~~GP~fIeV~I  154 (157)
T cd02001          99 YGSTGGQPTPS-SNVNLEAWAAACGYLVLSA--PLLGGLGSEFAGLL----ATTGPTLLHAPI  154 (157)
T ss_pred             CCCCCCCCCCC-CCCCHHHHHHHCCCCEEEE--CCHHHHHHHHHHHH----CCCCCEEEEEEE
T ss_conf             32467856754-4669999999869857995--89999999999998----499998999995