HHsearch alignment for GI: 254781051 and conserved domain: cd02004
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL cleaves the acyloin linkage of benzoin producing 2 molecules of benzaldehyde and enabling the Pseudomonas to grow on benzoin as the sole carbon and energy source. OCoD has a role in the detoxification of oxalate, catalyzing the decarboxylation of oxalyl-CoA to formate. 2-HPCL is a peroxisomal enzyme which plays a role in the alpha-oxidation of 3-methyl-branched fatty acids, catalyzing the cleavage of 2-hydroxy-3-methylacyl-CoA into formyl-CoA and a 2-methyl-branched fatty aldehyde. All these enzymes depend on Mg2+ and TPP for activity.
Probab=95.98 E-value=0.056 Score=34.64 Aligned_cols=156 Identities=19% Similarity=0.138 Sum_probs=96.0
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE-EEC-CCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 89999985588743223455510015026889-835-9618999717877310004455323677776416665445556
Q gi|254781051|r 286 PRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNR-QIC-GKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGEKSIS 363 (957)
Q Consensus 286 ~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~-~~~-g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~ 363 (957)
T Consensus 1 P~~v~~~l~~~lp~d~iv~~D~G~~~~~~~~~~~~~~p~~~~--~~~~~g~mG~~lpaaiGa~lA~p~------------ 66 (172)
T cd02004 1 PYRVLHELQEALPDDAIIVSDGGNTMDWARYILRPRKPRHRL--DAGTFGTLGVGLGYAIAAALARPD------------ 66 (172)
T ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCEEE--CCCCCCHHHHHHHHHHHHHHHCCC------------
T ss_conf 979999999648988099987737799999974737999498--079876477799999999997899------------
Q ss_pred CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCE-ECCCCC----H--------HCCCCCCCCH
Q ss_conf 54454047888625753334672588764510677443657999841602-012470----1--------0246778400
Q gi|254781051|r 364 LVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQI-GFTTNP----S--------SARSCTYASD 430 (957)
Q Consensus 364 ~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQI-GFTT~p----~--------d~RSs~Y~TD 430 (957)
T Consensus 67 ----~~Vv~i--~GDG~f~m~~~EL~Ta~~~~lp------i~~iV~nN~~~~~i~~~q~~~~~~~~~~~~~~~~~df-~~ 133 (172)
T cd02004 67 ----KRVVLV--EGDGAFGFSGMELETAVRYNLP------IVVVVGNNGGWYQGLDGQQLSYGLGLPVTTLLPDTRY-DL 133 (172)
T ss_pred ----CEEEEE--ECCCCHHCCCHHHHHHHHHCCC------EEEEEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCH-HH
T ss_conf ----849999--7797340240788899984988------5999982883289999989872689874321899877-89
Q ss_pred HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 11220340587426788999999999999999738973998642
Q gi|254781051|r 431 ISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVC 474 (957)
Q Consensus 431 iAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~ 474 (957)
T Consensus 134 iA~a~G~~~~~v--~~~~el~~al~~a~~----~~~p~liev~i 171 (172)
T cd02004 134 VAEAFGGKGELV--TTPEELKPALKRALA----SGKPALINVII 171 (172)
T ss_pred HHHHCCCEEEEE--CCHHHHHHHHHHHHH----CCCCEEEEEEC
T ss_conf 999759828997--899999999999995----89969999981