HHsearch alignment for GI: 254781051 and conserved domain: cd02004

>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL cleaves the acyloin linkage of benzoin producing 2 molecules of benzaldehyde and enabling the Pseudomonas to grow on benzoin as the sole carbon and energy source. OCoD has a role in the detoxification of oxalate, catalyzing the decarboxylation of oxalyl-CoA to formate. 2-HPCL is a peroxisomal enzyme which plays a role in the alpha-oxidation of 3-methyl-branched fatty acids, catalyzing the cleavage of 2-hydroxy-3-methylacyl-CoA into formyl-CoA and a 2-methyl-branched fatty aldehyde. All these enzymes depend on Mg2+ and TPP for activity.
Probab=95.98  E-value=0.056  Score=34.64  Aligned_cols=156  Identities=19%  Similarity=0.138  Sum_probs=96.0

Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE-EEC-CCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             89999985588743223455510015026889-835-9618999717877310004455323677776416665445556
Q gi|254781051|r  286 PRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNR-QIC-GKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGEKSIS  363 (957)
Q Consensus       286 ~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~-~~~-g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~  363 (957)
T Consensus         1 P~~v~~~l~~~lp~d~iv~~D~G~~~~~~~~~~~~~~p~~~~--~~~~~g~mG~~lpaaiGa~lA~p~------------   66 (172)
T cd02004           1 PYRVLHELQEALPDDAIIVSDGGNTMDWARYILRPRKPRHRL--DAGTFGTLGVGLGYAIAAALARPD------------   66 (172)
T ss_pred             CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCEEE--CCCCCCHHHHHHHHHHHHHHHCCC------------
T ss_conf             979999999648988099987737799999974737999498--079876477799999999997899------------


Q ss_pred             CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCE-ECCCCC----H--------HCCCCCCCCH
Q ss_conf             54454047888625753334672588764510677443657999841602-012470----1--------0246778400
Q gi|254781051|r  364 LVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQI-GFTTNP----S--------SARSCTYASD  430 (957)
Q Consensus       364 ~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQI-GFTT~p----~--------d~RSs~Y~TD  430 (957)
T Consensus        67 ----~~Vv~i--~GDG~f~m~~~EL~Ta~~~~lp------i~~iV~nN~~~~~i~~~q~~~~~~~~~~~~~~~~~df-~~  133 (172)
T cd02004          67 ----KRVVLV--EGDGAFGFSGMELETAVRYNLP------IVVVVGNNGGWYQGLDGQQLSYGLGLPVTTLLPDTRY-DL  133 (172)
T ss_pred             ----CEEEEE--ECCCCHHCCCHHHHHHHHHCCC------EEEEEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCH-HH
T ss_conf             ----849999--7797340240788899984988------5999982883289999989872689874321899877-89


Q ss_pred             HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf             11220340587426788999999999999999738973998642
Q gi|254781051|r  431 ISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVC  474 (957)
Q Consensus       431 iAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~  474 (957)
T Consensus       134 iA~a~G~~~~~v--~~~~el~~al~~a~~----~~~p~liev~i  171 (172)
T cd02004         134 VAEAFGGKGELV--TTPEELKPALKRALA----SGKPALINVII  171 (172)
T ss_pred             HHHHCCCEEEEE--CCHHHHHHHHHHHHH----CCCCEEEEEEC
T ss_conf             999759828997--899999999999995----89969999981