HHsearch alignment for GI: 254781051 and conserved domain: pfam00676
>pfam00676 E1_dh Dehydrogenase E1 component. This family uses thiamine pyrophosphate as a cofactor. This family includes pyruvate dehydrogenase, 2-oxoglutarate dehydrogenase and 2-oxoisovalerate dehydrogenase.
Probab=99.97 E-value=7e-27 Score=223.02 Aligned_cols=291 Identities=22% Similarity=0.279 Sum_probs=240.8
Q ss_pred HHHHHHHHHHHHHHHCCCCEEC----CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHH
Q ss_conf 9999989999986403362222----564658999999999998737910799806765526899988537989999985
Q gi|254781051|r 218 LVRAEGFEKFIDIKYKGAKRFG----ADGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVLSQIMNKLPRSIFYEF 293 (957)
Q Consensus 218 L~~Ae~FE~FL~~Kf~g~KRFs----LEG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL~Nvl~Kp~~~iF~EF 293 (957)
T Consensus 3 ~m~~~r~ed~~~~~~~~~~~~g~~h~~~GqEA~~vg~~~~l------~~~D~~~~~-yR~~g~~la~--G~~~~~~~ae~ 73 (303)
T pfam00676 3 MMTLRRMEDARMALYQRKGRRGFCHLYAGQEALQVGIAAAL------NPGDYVIPT-YRDHGNLLAR--GVSLEQVMAEL 73 (303)
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC------CCCCEEEEC-HHHHHHHHHC--CCCHHHHHHHH
T ss_conf 55999999999999973898246489888899999999976------999999806-6669999981--99999999997
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
Q ss_conf 58874322345551001502688983596189997178773100044553236777764166654455565445404788
Q gi|254781051|r 294 KGKGPSEKEYSGDVKYHLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPL 373 (957)
Q Consensus 294 ~g~~~~~~~~sGDVKYHLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpi 373 (957)
T Consensus 74 ~Gk~~g~~~Grggs-mh~~~~~--------~~~~~~~~~~~vg~~~~~avG~A~a~k~~~~--------------~~v~v 130 (303)
T pfam00676 74 TGNEAGCSKGKGGS-MHGYYAP--------KNNRFYGGNGIVGAQVPLGAGIALAAKYRGK--------------KEVAI 130 (303)
T ss_pred CCCCCCCCCCCCCC-CCCCCCC--------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC--------------CCEEE
T ss_conf 78988998999997-7457666--------4455147874130482265668999996389--------------98799
Q ss_pred EEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHH
Q ss_conf 86257533346725887645106774436579998416020124701024677840011220340587426788999999
Q gi|254781051|r 374 IIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIPIFHVNGDDPEAVIRV 453 (957)
Q Consensus 374 liHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aPI~HVN~DdpEav~~~ 453 (957)
T Consensus 131 ~~~GDGa-~~~G~f~EalN~A~~~~lP---vifv~eNN~yaist~~~~~~~~~~i~~ra~~~gi~~~~vDG~D~~~v~~~ 206 (303)
T pfam00676 131 TLFGDGA-TNQGQFFEALNFAALWKLP---VIFVCENNQYAISTPAERSSASTYYADRARGYGIPGIRVDGMDPLAVYQA 206 (303)
T ss_pred EEECCCC-CCCCHHHHHHHHHHHCCCC---EEEEEEECCCCCCCCHHHHCCCCCHHHHHHHCCCEEEECCCCCHHHHHHH
T ss_conf 9967997-5232999999987543898---79999527733666664514755488886525802896488658999999
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCC-HHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999999997389739986421125656435422355-788888671899899999998644898989999999999999
Q gi|254781051|r 454 VRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPSFTQ-PMMYKTIRSHKSVLQLYADSLMKNQVISKQELQSLANNWHKY 532 (957)
Q Consensus 454 ~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~fTQ-P~mY~~I~~hp~v~~~Y~~~Li~~g~it~~e~~~~~~~~~~~ 532 (957)
T Consensus 207 ~~~a~~~aR~g~gP~lie~~tyR~~gHs~~D~~~~Yr~~~e~~~~~~~~DPi~~~~~~L~~~g~~~~~~~~~i~~e~~~e 286 (303)
T pfam00676 207 VKFAAERARTGNGPTLIELVTYRYGGHSMSDDPSTYRTREEVEEVRKKKDPIKRLKKHLVSRGVVSEEELKEIEKEVRKE 286 (303)
T ss_pred HHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 99999998648998899875113786678888767779899999886599699999999987999999999999999999
Q ss_pred HHHHHHHHHCCC
Q ss_conf 775666541258
Q gi|254781051|r 533 LEAEYKESESYC 544 (957)
Q Consensus 533 l~~~~~~~k~~~ 544 (957)
T Consensus 287 v~~a~~~A~~~p 298 (303)
T pfam00676 287 IEEAVKKAESDP 298 (303)
T ss_pred HHHHHHHHHHCC
T ss_conf 999999998086