HHsearch alignment for GI: 254781051 and conserved domain: pfam02779
>pfam02779 Transket_pyr Transketolase, pyrimidine binding domain. This family includes transketolase enzymes, pyruvate dehydrogenases, and branched chain alpha-keto acid decarboxylases.
Probab=99.70 E-value=2.3e-16 Score=143.51 Aligned_cols=171 Identities=30% Similarity=0.395 Sum_probs=149.4
Q ss_pred CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHH
Q ss_conf 64211478988898863583157850100223332302799977888445563442789845999824311110134320
Q gi|254781051|r 603 GIDWSMAESLAFGSLCYEGYKVRLSGQDCERGTFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEY 682 (957)
Q Consensus 603 ~iDW~~AE~LA~~SLl~eG~~VRlsGQD~~RGTFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEy 682 (957)
T Consensus 2 ~~~~r~a~~~al~~~~~~d~~vv~~~~D~~~g~~~~~~~~~~~~----------------~~~R~~~~gIaE~~~vg~a~ 65 (174)
T pfam02779 2 KIATRKASGEALAELAERDPRVVGGGADVGGGTFTVTKGLLHPQ----------------GEGRVIDTGIAEQAMVGIAN 65 (174)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCC----------------CCCCEEECCCCHHHHHHHHH
T ss_conf 76499999999999997798999994877887551332465877----------------89856765817799999999
Q ss_pred CCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEE
Q ss_conf 22113865311100002442454102256554202576233368-13543688888887656440578875214378269
Q gi|254781051|r 683 GYSLNNLNALTIWEAQFGDFANGAQVILDQFITAGEQKWLCTSN-LVCLLPHGYEGQGPEHSSARLERFLQMCAENNMYV 761 (957)
Q Consensus 683 Gys~~~p~~L~iWEAQFGDF~NgAQviiDqfiss~e~KW~~~sg-lvllLPHGyeGqGPEHSSaRlERfLQl~a~~N~~V 761 (957)
T Consensus 66 G~A~~G~--~~iv~~~f~~F~---~~r~~~~i~~~~~~~~~~v~~v~~~~g~~~g~~G~tHhs~~~~a~~~~iP--gl~V 138 (174)
T pfam02779 66 GMALHGL--LPPVEATFGDFA---NIRADAAIRHYAALGKLPVPFVVTRDPIGVGEDGPTHQSQEDEAYLRAIP--GLKV 138 (174)
T ss_pred HHHHHCC--CCCCCHHHHHHH---HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCC--CCEE
T ss_conf 9997099--641112178888---88659999999985899998786664602567715465642899997589--9889
Q ss_pred EECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHC
Q ss_conf 72488999999999974353488689856602210
Q gi|254781051|r 762 ANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLR 796 (957)
Q Consensus 762 ~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR 796 (957)
T Consensus 139 ~~Ps~~~da~~ll~~ai~~~~~~Pv~i~~~r~~~~ 173 (174)
T pfam02779 139 VRPSDPAEAKGLLRAAIRRDDDDPVVFRLPRQLLR 173 (174)
T ss_pred EECCCHHHHHHHHHHHHHCCCCCCEEEEECHHHCC
T ss_conf 96199999999999999648998389983077678