HHsearch results for GI: 254781051 and protein with PDBid: 1ik6_A
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=99.38 E-value=4.5e-11 Score=101.85 Aligned_cols=304 Identities=18% Similarity=0.232 Sum_probs=202.8
Q ss_pred CCCCHHHHHHHHHHHHHCCCEEEEECCCCCC--CCCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHH
Q ss_conf 6421147898889886358315785010022--33323027999778884455634427898459998243111101343
Q gi|254781051|r 603 GIDWSMAESLAFGSLCYEGYKVRLSGQDCER--GTFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGF 680 (957)
Q Consensus 603 ~iDW~~AE~LA~~SLl~eG~~VRlsGQD~~R--GTFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgF 680 (957)
..+|..|=..|..-++..--.|-+-|||+.. |.|. .|..- .....++ .++|.+++|.+.+||
T Consensus 50 ~~~~~~a~~~al~~~~~~d~~vv~~g~dv~~~~G~~~---------~t~gl---~~k~gp~----R~~d~gIaEq~~vg~ 113 (369)
T 1ik6_A 50 MANMAKAINMALHEEMERDERVVVLGEDVGKKGGVFL---------VTEGL---YERFGPE----RVIDTPLNEGGILGF 113 (369)
T ss_dssp EECHHHHHHHHHHHHHHHCTTEEEEEC---------C---------TTTTH---HHHHCTT----TEEECCSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHH---------HCHHH---HHHHCCC----CEEECCHHHHHHHHH
T ss_conf 6649999999999999669899999476676787323---------04558---9985886----067656228999999
Q ss_pred HHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH-----HHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf 2022113865311100002442454102256554202-----57623336813543688888887656440578875214
Q gi|254781051|r 681 EYGYSLNNLNALTIWEAQFGDFANGAQVILDQFITAG-----EQKWLCTSNLVCLLPHGYEGQGPEHSSARLERFLQMCA 755 (957)
Q Consensus 681 EyGys~~~p~~L~iWEAQFGDF~NgAQviiDqfiss~-----e~KW~~~sglvllLPHGyeGqGPEHSSaRlERfLQl~a 755 (957)
--|.++.- -..+++-||.||.--| +||.+... ....+....+|+-.|.|+.+.|+-|.|-..+-++.-
T Consensus 114 AaGlA~~G--~~Piv~~~~~~f~~ra---~dqi~~~~a~~~~~~~~~~~~~~v~~~~~g~~~~~gthhs~~d~a~~~~-- 186 (369)
T 1ik6_A 114 AMGMAMAG--LKPVAEIQFVDFIWLG---ADELLNHIAKLRYRSGGNYKAPLVVRTPVGSGTRGGLYHSNSPEAIFVH-- 186 (369)
T ss_dssp HHHHHHTT--CEEEEECCCC----CC---HHHHHHHHHHHHC------CCCCEEEEEECC-----------HHHHHHT--
T ss_pred HHHHHHCC--CEEEEEEECCHHHHHH---HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHC--
T ss_conf 99999689--9479999611024677---9999999999765407862145663237756789876143775889846--
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCHH--HHCCCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 37826972488999999999974353488689856602210801268878--9379986035157764334445444579
Q gi|254781051|r 756 ENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVVSSLS--DMTCGSVFQAVLSDDAEYHGKTSVKLKE 833 (957)
Q Consensus 756 ~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~--d~~~g~~F~~vi~d~~~~~~~~~~~~~~ 833 (957)
=.||.|+.|++|.+..++|+--+. ..+|.+++-||.|.|.+...-+-. .+.-|. . .|+ .+
T Consensus 187 iP~l~V~~Psd~~e~~~ll~~a~~--~~~P~~~~~~k~l~~~~~~~~~~~~~~~~~Gk-~-~i~--------------r~ 248 (369)
T 1ik6_A 187 TPGLVVVMPSTPYNAKGLLKAAIR--GDDPVVFLEPKILYRAPREEVPEGDYVVEIGK-A-RVA--------------RE 248 (369)
T ss_dssp CTTCEEECCCSHHHHHHHHHHHHH--SSSCEEEEEEGGGSSCCCEEEECSSCCCCTTC-C-EEE--------------EC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHH--CCCCEEEEECCCCCCCCCCCCCCCCCEECCCE-E-EEE--------------EE
T ss_conf 799789960999999999999987--58986896062012577777899881121887-8-999--------------82
Q ss_pred HHHCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 54576899868857899999999769986899984014868289999998537998399806785317845789976999
Q gi|254781051|r 834 DSHIRRVILCTGKVYYDLLDNRDMRNIADIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQNMGAWTFIEPYLEK 913 (957)
Q Consensus 834 ~~~v~rvi~csGKvyydL~~~r~~~~~~~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N~GaW~~v~~rl~~ 913 (957)
- -+-.|+|+|-..+.-+++-++.+. ++.+|.+-.|.||+.+.|.+.++++.. +|.+.|.....|-=+.|...+.+
T Consensus 249 G--~dvtIia~G~~v~~al~aa~~L~~-~~~VId~~~lkPlD~~~i~~~~~kt~~--iv~vEE~~~~GGlGs~I~~~l~e 323 (369)
T 1ik6_A 249 G--DDVTLVTYGAVVHKALEAAERVKA-SVEVVDLQTLNPLDFDTVLKSVSKTGR--LIIAHDSPKTGGLGAEVRALVAE 323 (369)
T ss_dssp C--SSEEEEECTTHHHHHHHHHHTSSS-CEEEEECCEEETTCHHHHHHHHHHHCC--EEEEEEEESTTSHHHHHHHHHHH
T ss_pred C--CCEEEEEECCHHHHHHHHHHHCCC-CCEEEEEEECCCCCHHHHHHHHHHCCE--EEEEECCCCCCCHHHHHHHHHHH
T ss_conf 8--988999825027889999987389-816998564488778999999962898--99998799667599999999998
Q ss_pred H-HHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9-87505677601897536646723386789999999999987
Q gi|254781051|r 914 V-LHSIGADYSRVRYVGRLPSASTAVGHMSRHLEQLSSFIEDA 955 (957)
Q Consensus 914 ~-l~~~~~~~~~~~y~gR~~~aspA~G~~~~H~~e~~~li~~a 955 (957)
- +..+ ..++.-+|-+-.+.|....-..+.-..++|++.+
T Consensus 324 ~~~~~l---~~pv~rig~~d~p~~~~~le~~y~l~~e~I~~~i 363 (369)
T 1ik6_A 324 KALDRL---TAPVIRLAGPDVPQSPIAADAAYAPTVERIIKAI 363 (369)
T ss_dssp HSGGGC---SSCCEEEEECCCC------------CHHHHHHHH
T ss_pred HCHHHC---CCCEEEECCCCCCCCCHHHHHHHCCCHHHHHHHH
T ss_conf 466536---9985997179808784759988396999999999