HHsearch results for GI: 254781051 and protein with PDBid: 1qs0_A
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=99.93 E-value=1.7e-22 Score=188.23 Aligned_cols=305 Identities=16% Similarity=0.123 Sum_probs=242.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE---ECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
Q ss_conf 788879889999999999999899999864033622---22564658999999999998737910799806765526899
Q gi|254781051|r 202 FSSNFSKEEQRDILDKLVRAEGFEKFIDIKYKGAKR---FGADGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVL 278 (957)
Q Consensus 202 ~~~~~s~eeK~~iL~~L~~Ae~FE~FL~~Kf~g~KR---FsLEG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL 278 (957)
..+.+++|+-+.+|+.|+.+-.||..+..-|-.-|- .+.-|-|+.-.++-. ...-++.++ ..||+.=-.|
T Consensus 67 ~~~~l~~e~l~~~yr~M~~~R~~d~~~~~l~rqG~i~f~~~~~GqEA~~vg~~~------al~~~D~~f-~~yR~~g~~l 139 (407)
T 1qs0_A 67 WAEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQAL------ALNRTDMCF-PTYRQQSILM 139 (407)
T ss_dssp GGSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCCCCCTTTHHHHHHHHH------HSCTTSEEE-CCSSCHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH------HCCCCCEEE-ECCCHHHHHH
T ss_conf 789989999999999999999999999999977985465899881999999998------678778894-2644599999
Q ss_pred HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 98853798999998558874322345551001502688983596189997178773100044553236777764166654
Q gi|254781051|r 279 SQIMNKLPRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVG 358 (957)
Q Consensus 279 ~Nvl~Kp~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~ 358 (957)
+- |-|+..+|+|+.|+......|. .-.-|++.- ...+.+--|.+-+--|++.|.+-|.+.+..+
T Consensus 140 ar--G~~~~~~~~e~~g~~~g~~~Gr-~~~~H~~~~----------~~~~~~~s~~vg~q~p~AvG~A~a~k~~~~~--- 203 (407)
T 1qs0_A 140 AR--DVSLVEMICQLLSNERDPLKGR-QLPIMYSVR----------EAGFFTISGNLATQFVQAVGWAMASAIKGDT--- 203 (407)
T ss_dssp HT--TCCHHHHHHHHHTCTTCTTTTC-SCTTCCCBG----------GGTBCCCCSSSSHHHHHHHHHHHHHHHTTCC---
T ss_pred HC--CCCHHHHHHHHHCCCCCCCCCC-CCEEEECCH----------HCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC---
T ss_conf 81--7169999999837788998999-854221330----------0286777741202304544889988870899---
Q ss_pred CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCC-CCCCCHHHHHHCC
Q ss_conf 455565445404788862575333467258876451067744365799984160201247010246-7784001122034
Q gi|254781051|r 359 EKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARS-CTYASDISKSIGI 437 (957)
Q Consensus 359 ~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RS-s~Y~TDiAK~i~a 437 (957)
-+.+...||+|. .||.++|+|||+.+...- .|-||.|||.+..|.....++ +..-.+.|+.++.
T Consensus 204 -----------~v~v~~~GDGat-~eG~f~EalN~As~~~lP---vifv~eNN~yaist~~~~~~~~~~~~a~ra~~~Gi 268 (407)
T 1qs0_A 204 -----------KIASAWIGDGAT-AESDFHTALTFAHVYRAP---VILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGI 268 (407)
T ss_dssp -----------CCEEEEEETGGG-GSHHHHHHHHHHHHHTCC---EEEEEEECSEETTEEGGGGTTTTCCSTHHHHHTTC
T ss_pred -----------CEEEECCCCCCC-CCCCHHHHHHHHHHCCCC---EEEEEEECCCCCCCHHHHHHCCCCHHHHHHHCCCC
T ss_conf -----------735540699854-557399999999863785---47999746766553044441331059887632688
Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC
Q ss_conf 05874267889999999999999997389739986421125656435422355788888671899899999998644898
Q gi|254781051|r 438 PIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPSFTQPMMYKTIRSHKSVLQLYADSLMKNQVI 517 (957)
Q Consensus 438 PI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~fTQP~mY~~I~~hp~v~~~Y~~~Li~~g~i 517 (957)
|.++|+|.|+.+|..+++-|+++-.+-++.++|.++|||-.||...|||..-.|.---.--+...+...+.+.|++.|++
T Consensus 269 ~~~~vDGnD~~av~~a~~~A~~~aR~g~gP~lIe~~TyR~~gHs~sDD~~~YR~~~Ei~~w~~~DPi~rl~~~L~~~g~~ 348 (407)
T 1qs0_A 269 ASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLGDPIARLKQHLIKIGHW 348 (407)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCCSCSSTTCCGGGTSCTTHHHHCTTCCHHHHHHHHHHHTTSC
T ss_pred CEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC
T ss_conf 71576587589999999999999982899679998620698887878745788999999988379799999999987999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 989999999999999775666541258
Q gi|254781051|r 518 SKQELQSLANNWHKYLEAEYKESESYC 544 (957)
Q Consensus 518 t~~e~~~~~~~~~~~l~~~~~~~k~~~ 544 (957)
++++.+++.++.++..+++++.++...
T Consensus 349 ~e~e~~~i~~e~~~eV~~a~~~Ae~~~ 375 (407)
T 1qs0_A 349 SEEEHQATTAEFEAAVIAAQKEAEQYG 375 (407)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999998621