HHsearch results for GI: 254781051 and protein with PDBid: 1r9j_A
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=97.05 E-value=0.024 Score=35.79 Aligned_cols=204 Identities=14% Similarity=0.144 Sum_probs=122.7
Q ss_pred EEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCC--CCCCCCCCC
Q ss_conf 982431111013432022113865311100002442454102256554202576233368135436888--888876564
Q gi|254781051|r 667 VVNSFLSEQAVLGFEYGYSLNNLNALTIWEAQFGDFANGAQVILDQFITAGEQKWLCTSNLVCLLPHGY--EGQGPEHSS 744 (957)
Q Consensus 667 v~nS~LSE~avlgFEyGys~~~p~~L~iWEAQFGDF~NgAQviiDqfiss~e~KW~~~sglvllLPHGy--eGqGPEHSS 744 (957)
.+|...+|.+..++--|+++.. .+.-|-+.|.-|. |-..||.+-.+ |.+...++...+-|. -+-||-|-+
T Consensus 404 ~~~~gIaE~~~~~~a~Gla~~~--g~~p~~~~~~~f~---~~~~~~i~~~~---~~~~~~~~~~~~~g~~~g~dG~tHq~ 475 (673)
T 1r9j_A 404 YIRFGVREHAMCAILNGLDAHD--GIIPFGGTFLNFI---GYALGAVRLAA---ISHHRVIYVATHDSIGVGEDGPTHQP 475 (673)
T ss_dssp EEECCSCHHHHHHHHHHHHHHS--SCEEEEEEEGGGG---GGGHHHHHHHH---HHTCCCEEEEECCSGGGCTTCTTTCC
T ss_pred CCCCCHHHHHHHHHHHHHHHCC--CCCEEEEEEEHHC---CCCCHHHHHHH---HCCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf 2111134557999999999829--9603887311011---22309999876---43577258741464433577644352
Q ss_pred CCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCC
Q ss_conf 40578875214378269724889999999999743534886898566022108012688789379986035157764334
Q gi|254781051|r 745 ARLERFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVVSSLSDMTCGSVFQAVLSDDAEYH 824 (957)
Q Consensus 745 aRlERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~d~~~g~~F~~vi~d~~~~~ 824 (957)
.-- .-.|.+=.||.|+.|+.+.....+++.-+.+....+. +..++.-.. +.-....+.+..|. . .++..
T Consensus 476 ~~d--~~~lr~iPn~~v~~P~d~~e~~~~~~~~~~~~~~~~~-~~~~r~~~~-~~~~~~~~~~~~G~-~-~~~~~----- 544 (673)
T 1r9j_A 476 VEL--VAALRAMPNLQVIRPSDQTETSGAWAVALSSIHTPTV-LCLSRQNTE-PQSGSSIEGVRHGA-Y-SVVDV----- 544 (673)
T ss_dssp SSH--HHHHHHSTTCEEECCSSHHHHHHHHHHHHHCTTCCEE-EECCSSEEC-CCTTCCHHHHHTSC-E-EEECC-----
T ss_pred HHH--HHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCCEE-EECCCCCCC-CCCCCCHHHHCCCC-E-EEEEC-----
T ss_conf 678--8998728994323799999999999986630689513-322777878-76766555651677-8-99987-----
Q ss_pred CCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHCCC-CCEEEEEEECCCCCHH---HHHHHHHHHCCCC-EEEEECCCCC
Q ss_conf 445444579545768998688578999999997699-8689998401486828---9999998537998-3998067853
Q gi|254781051|r 825 GKTSVKLKEDSHIRRVILCTGKVYYDLLDNRDMRNI-ADIYLLRIEQLYPFPE---DYLIKVLSRFVQA-EIVWCQEEPQ 899 (957)
Q Consensus 825 ~~~~~~~~~~~~v~rvi~csGKvyydL~~~r~~~~~-~~vaivRiEqLyPfP~---~~l~~~l~~y~~~-e~vW~QEEp~ 899 (957)
+.-+=.|+++|-.....+++-+.... -++.+|-+--+=||.. .-+..++ ++. -+|.+ ||..
T Consensus 545 ----------~~~~v~iia~G~~v~~al~Aa~~L~~~i~~~Vv~~~s~kpld~~~~~~~~~v~---~~~~~vvtv-E~~~ 610 (673)
T 1r9j_A 545 ----------PDLQLVIVASGSEVSLAVDAAKALSGELRVRVVSMPCQELFDAQPDTYRQAVL---PAGVPVVSV-EAYV 610 (673)
T ss_dssp ----------TTCSEEEEECGGGHHHHHHHHHHHTTTCCEEEEECSCHHHHHTSCHHHHHHHS---CTTSCEEEE-CSSC
T ss_pred ----------CCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHHHHH---CCCCCEEEE-ECCC
T ss_conf ----------99989999750999999999999867898699977877635476899999862---569938999-5993
Q ss_pred CCCC
Q ss_conf 1784
Q gi|254781051|r 900 NMGA 903 (957)
Q Consensus 900 N~Ga 903 (957)
-.|.
T Consensus 611 ~~g~ 614 (673)
T 1r9j_A 611 SFGW 614 (673)
T ss_dssp CTTG
T ss_pred CCCC
T ss_conf 2255