HHsearch results for GI: 254781051 and protein with PDBid: 2o1s_A
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=98.84 E-value=1.1e-06 Score=68.60 Aligned_cols=268 Identities=15% Similarity=0.115 Sum_probs=171.3
Q ss_pred CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHH
Q ss_conf 64211478988898863583157850100223332302799977888445563442789845999824311110134320
Q gi|254781051|r 603 GIDWSMAESLAFGSLCYEGYKVRLSGQDCERGTFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEY 682 (957)
Q Consensus 603 ~iDW~~AE~LA~~SLl~eG~~VRlsGQD~~RGTFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEy 682 (957)
...|.-+=.-+...+..+.-.+-..+.|...||.... +..-.+ ++| +|...+|.+..++--
T Consensus 318 ~~~~~~~~~~~l~~~~~~~~~i~~i~~dl~~~tg~~~---------------f~~~~p--~R~--i~~GIaE~~mv~~a~ 378 (621)
T 2o1s_A 318 LPSYSKIFGDWLCETAAKDNKLMAITPAMREGSGMVE---------------FSRKFP--DRY--FDVAIAEQHAVTFAA 378 (621)
T ss_dssp CCBHHHHHHHHHHHHHHHCTTEEEEESSCTTTTTCHH---------------HHHHCT--TTE--EECCSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH---------------HHHHCC--CCE--EEHHHHHHHHHHHHH
T ss_conf 8568999999999998519988998478778767379---------------998689--646--622067999999998
Q ss_pred CCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHH-HHHHHCCCCCCEEECCCCC-CC-CCCCCCCCCHHHHHHHCCCCCE
Q ss_conf 2211386531110000244245410225655420-2576233368135436888-88-8876564405788752143782
Q gi|254781051|r 683 GYSLNNLNALTIWEAQFGDFANGAQVILDQFITA-GEQKWLCTSNLVCLLPHGY-EG-QGPEHSSARLERFLQMCAENNM 759 (957)
Q Consensus 683 Gys~~~p~~L~iWEAQFGDF~NgAQviiDqfiss-~e~KW~~~sglvllLPHGy-eG-qGPEHSSaRlERfLQl~a~~N~ 759 (957)
|.++. ++.-+=+-|.+|. |-..||-+-. +-. ...+++...|+- -| -||-|-+-- -.--|.+=.||
T Consensus 379 GlA~~---G~~p~~~tf~~F~---~~a~~qi~~~~al~----~~pv~~v~~~~gi~G~dGpTHq~i~--dla~lr~iPnl 446 (621)
T 2o1s_A 379 GLAIG---GYKPIVAIYSTFL---QRAYDQVLHDVAIQ----KLPVLFAIDRAGIVGADGQTHQGAF--DLSYLRCIPEM 446 (621)
T ss_dssp HHHHT---TCEEEEEEETTGG---GGGHHHHHHTTTTT----TCCCEEEEESCBCCCTTCGGGCBCS--HHHHTTTSTTC
T ss_pred HHHHC---CCEEEEEEEHHHH---HHHHHHHHHHHHHC----CCCEEEEEECCEECCCCCCCCCCHH--HHHHHHCCCCC
T ss_conf 99858---9906999638999---98899999998854----9896999979810799998633167--99998258996
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCE
Q ss_conf 69724889999999999743534886898566022108012688789379986035157764334445444579545768
Q gi|254781051|r 760 YVANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVVSSLSDMTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRR 839 (957)
Q Consensus 760 ~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~r 839 (957)
.|+.|+++...-.+++.-+.. -..|.++..|+.-..... .++...+..|. .. |+.+ .+ +-
T Consensus 447 ~v~~P~d~~e~~~~~~~a~~~-~~~p~~ir~~r~~~~~~~-~~~~~~~~~g~-~~-v~~~--------------g~--dv 506 (621)
T 2o1s_A 447 VIMTPSDENECRQMLYTGYHY-NDGPSAVRYPRGNAVGVE-LTPLEKLPIGK-GI-VKRR--------------GE--KL 506 (621)
T ss_dssp EEECCSSHHHHHHHHHHHHHC-CSSCEEEECCSSBCCCCC-CCCCCCCCTTC-CE-EEEC--------------CS--SE
T ss_pred EEECCCCHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCCC-CCCCEECCCCC-EE-EEEC--------------CC--CE
T ss_conf 898079999999999999971-799818994356565434-34440026874-79-9844--------------99--88
Q ss_pred EEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH-HHHHHHHHHHHHC
Q ss_conf 998688578999999997699868999840148682899999985379983998067853178457-8997699998750
Q gi|254781051|r 840 VILCTGKVYYDLLDNRDMRNIADIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQNMGAWT-FIEPYLEKVLHSI 918 (957)
Q Consensus 840 vi~csGKvyydL~~~r~~~~~~~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N~GaW~-~v~~rl~~~l~~~ 918 (957)
+|+++|-....-+++.+..+ +.+|-+-.+-||+.+.|.+.+++|.. |+.=||.--.|++. .+. +.+...
T Consensus 507 ~iia~G~~v~~A~~aae~L~---~~vi~~~~ikPlD~~~i~~~~~~~~~---vvtvEe~~~~GG~Gs~i~----~~l~~~ 576 (621)
T 2o1s_A 507 AILNFGTLMPEAAKVAESLN---ATLVDMRFVKPLDEALILEMAASHEA---LVTVEENAIMGGAGSGVN----EVLMAH 576 (621)
T ss_dssp EEEEESTTHHHHHHHHHHHT---CEEEECCEEESCCHHHHHHHHHHCSE---EEEEEEEESTTSHHHHHH----HHHHHT
T ss_pred EEEEEHHHHHHHHHHHHCCC---CEEEEECCCCCCCHHHHHHHHHHCCE---EEEEECCCCCCCHHHHHH----HHHHHC
T ss_conf 99963489999999983689---75998083588899999999811896---999947986776899999----999967
Q ss_pred CCCCCEEEEEECCC
Q ss_conf 56776018975366
Q gi|254781051|r 919 GADYSRVRYVGRLP 932 (957)
Q Consensus 919 ~~~~~~~~y~gR~~ 932 (957)
+ ...++..+|-|.
T Consensus 577 ~-~~~~v~~iGi~d 589 (621)
T 2o1s_A 577 R-KPVPVLNIGLPD 589 (621)
T ss_dssp T-CCCCEEEEEECS
T ss_pred C-CCCCEEEEEECC
T ss_conf 9-998779998798