HHsearch results for GI: 254781051 and protein with PDBid: 3kom_A

>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=95.53  E-value=0.15  Score=29.70  Aligned_cols=443  Identities=13%  Similarity=0.138  Sum_probs=199.8

Q ss_pred             CCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCE
Q ss_conf             31000445532367777641666544555654454047888625753334672588764510677443657999841602
Q gi|254781051|r  334 HLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQI  413 (957)
Q Consensus       334 HLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQI  413 (957)
                      ||=.-=+++.|.|+|+.....- ... ........+|.+++  ||++.. .|+++|.||+..-.+  ..--|-|+=||++
T Consensus       117 ~lG~g~s~A~G~A~a~~~~~~~-~~~-~~~~~~~~~v~~~i--GDG~l~-eG~~~EAl~~a~~~~--l~nLivi~d~N~~  189 (663)
T 3kom_A          117 PLGQGVANAVGMALGEKLLSDR-YNT-PDLKVIDHHTYVFL--GDGCLM-EGVSHEACSLAGTLG--LNKLVAFWDDNNI  189 (663)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHH-HCB-TTBCSCCCCEEEEE--CHHHHH-SHHHHHHHHHHHHHT--CTTEEEEEEECC-
T ss_pred             CCHHHHHHHHHHHHHHHHHCCC-CCC-CCCCCCCCEEEEEE--CCCCCC-CHHHHHHHHHHHHCC--CCCEEEEECCCCC
T ss_conf             7068899999999999983012-367-64455675089997--665554-355899999996477--7765999758852


Q ss_pred             ECCCCCHHCCCCCCCCHHHHHH---CCCEEE-ECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC-CCCCC
Q ss_conf             0124701024677840011220---340587-426788999999999999999738973998642112565643-54223
Q gi|254781051|r  414 GFTTNPSSARSCTYASDISKSI---GIPIFH-VNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEG-DEPSF  488 (957)
Q Consensus       414 GFTT~p~d~RSs~Y~TDiAK~i---~aPI~H-VN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~-DeP~f  488 (957)
                      --..+.... .   ..++.+.+   +--++. +++++.+....+..-+   .....+-.+|-.-.-.-+|.-.. +.+..
T Consensus       190 ~i~~~~~~~-~---~~~~~~rf~a~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~p~~i~~~T~kg~G~~~~~~~~~~  262 (663)
T 3kom_A          190 SIDGDTKGW-F---SDNTPERFRAYGWHVIENVDGHDFVAIEKAINEA---HSQQQKPTLICCKTVIGFGSPEKAGTASV  262 (663)
T ss_dssp             ----CGGGT-C---CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHH---HHCSSSCEEEEEECCTTTTCTTTTTCSST
T ss_pred             CCCCCCCCC-C---CCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH---HHCCCCCCEEECCCEEECCCCCCCCCCCC
T ss_conf             347864565-4---5117888760684589850675167788999876---53047851354255562488421357633


Q ss_pred             C-------CHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH--HHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             5-------57888886718998999999986448989899999999999--99775666541258765666656862666
Q gi|254781051|r  489 T-------QPMMYKTIRSHKSVLQLYADSLMKNQVISKQELQSLANNWH--KYLEAEYKESESYCPEKLGLLHNGENERK  559 (957)
Q Consensus       489 T-------QP~mY~~I~~hp~v~~~Y~~~Li~~g~it~~e~~~~~~~~~--~~l~~~~~~~k~~~~~~~~~~~~~~~~~~  559 (957)
                      .       ++........++.           +......++........  ..........+......            
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~------------  319 (663)
T 3kom_A          263 HGSPLSDQERASAAKELNWDY-----------QAFEIPQDVYKYWDAREKGQALEANWQGQRNLFKDS------------  319 (663)
T ss_dssp             TSSCCCHHHHHHHHHHTTCCC-----------CTTCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHTTS------------
T ss_pred             CCCCCCHHHHHHHHHHHCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------
T ss_conf             565421057788988624556-----------676772467788876556668999988899986400------------


Q ss_pred             CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH----CC-CEEEEECCCCCCC
Q ss_conf             778999999998874368998620567788899899873343564211478988898863----58-3157850100223
Q gi|254781051|r  560 NSVSKEILKKIGSSIIRLPKSFNTHKIVERLMANRQKMIETGKGIDWSMAESLAFGSLCY----EG-YKVRLSGQDCERG  634 (957)
Q Consensus       560 T~v~~~~L~~i~~~l~~~Pe~f~~h~~v~k~~~~R~~~~~~~~~iDW~~AE~LA~~SLl~----eG-~~VRlsGQD~~RG  634 (957)
                        ...+.......  ...+..+  -+.........   ........+-    -|++..|.    .- .-+.+| .|...+
T Consensus       320 --~k~~~~~~~~~--~~~~~~~--~~~~~~~~~~~---~~~~~~~a~r----~a~~~~l~~l~~~~p~~~~~s-ad~~~~  385 (663)
T 3kom_A          320 --PKFDEFERVLS--KELPVGL--ESAINDYIASQ---LSNPVKVATR----KASQMVLEVLCKNMPEMFGGS-ADLTGS  385 (663)
T ss_dssp             --TTHHHHHHHHH--TCCCTTH--HHHHHHHHHHH---HHSCCCEEHH----HHHHHHHHHHHHHCTTEEEEE-CCC--C
T ss_pred             --CCHHHHHHHHH--CCCCCCC--CCCCHHHHHHH---HHCCCCCHHH----HHHHHHHHHHHHHCCCEEEEC-CCCCCC
T ss_conf             --20128888651--1233210--00201333333---4216660178----878999999997587859973-554577


Q ss_pred             CCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHH
Q ss_conf             33230279997788844556344278984599982431111013432022113865311100002442454102256554
Q gi|254781051|r  635 TFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGYSLNNLNALTIWEAQFGDFANGAQVILDQFI  714 (957)
Q Consensus       635 TFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~p~~L~iWEAQFGDF~NgAQviiDqfi  714 (957)
                      |......        ..+..-.   ...++  .++....|.+..++--|.+...  .+.-+-+-|.-|   .|-..||.+
T Consensus       386 ~~~~~~~--------~~~~~~~---~~~~r--~~~~GIaE~~~~~~aagla~~g--g~~Pv~~~ys~F---~~ra~dqi~  447 (663)
T 3kom_A          386 NNTNWSG--------SVWLNNT---QEGAN--YLSYGVREFGMAAIMNGLSLYG--GIKPYGGTFLVF---SDYSRNAIR  447 (663)
T ss_dssp             CSCCCTT--------CCBTTTC---STTCC--EEECCSCHHHHHHHHHHHHHHS--SCEEEEEEEGGG---HHHHHHHHH
T ss_pred             CCCCCCC--------CCCCCCC---CCCCC--CCHHHHHHHHHHHHHHHHHHCC--CCCCCEEEEEHH---HHHHHHHHH
T ss_conf             6532345--------5441124---46761--1004577678899988998659--964314675028---765257776


Q ss_pred             HHHHHHHCCCCCCEEECCCC--CCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCC
Q ss_conf             20257623336813543688--8888876564405788752143782697248899999999997435348868985660
Q gi|254781051|r  715 TAGEQKWLCTSNLVCLLPHG--YEGQGPEHSSARLERFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAPK  792 (957)
Q Consensus       715 ss~e~KW~~~sglvllLPHG--yeGqGPEHSSaRlERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPK  792 (957)
                      -..   .+....++....-|  .-..||-|-+.--.=+|..+  .||.|+.|+.+...-.+++..+.. --.|-++..|+
T Consensus       448 ~~~---~~~~~~v~~~~~~~~~~g~dG~tH~~~~di~~~r~i--p~~~v~~P~d~~e~~~~~~~~~~~-~~~p~~~~~~~  521 (663)
T 3kom_A          448 MSA---LMKQPVVHVMSHDSIGLGEDGPTHQPIEHVPSLRLI--PNLSVWRPADTIETMIAWKEAVKS-KDTPSVMVLTR  521 (663)
T ss_dssp             HHH---HTTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHTS--TTCEEECCCSHHHHHHHHHHHHHC-SSCCEEEECCS
T ss_pred             HHH---HCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCC--CCCEEECCCCHHHHHHHHHHHHHC-CCCCCCEEECC
T ss_conf             565---404760698304444434556677660149897347--885101788889999999999973-49984021047


Q ss_pred             HHHCCCC-CCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHCCCC--CEEEEEE
Q ss_conf             2210801-26887893799860351577643344454445795457689986885789999999976998--6899984
Q gi|254781051|r  793 SLLRHKR-VVSSLSDMTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRRVILCTGKVYYDLLDNRDMRNIA--DIYLLRI  868 (957)
Q Consensus       793 sLLR~~~-a~S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~rvi~csGKvyydL~~~r~~~~~~--~vaivRi  868 (957)
                      ....... .-....++..|.   .||-+.              +.-+=.|+++|-.....+++.+....+  ++.+|-+
T Consensus       522 ~~~~~~~~~~~~~~~i~kG~---~~l~~~--------------~~~~v~iia~G~~v~~al~Aa~~L~~~gi~~~Vv~~  583 (663)
T 3kom_A          522 QNLMPVVQTQHQVANIARGG---YLVKDN--------------PDAKLTIVATGSEVELAVKVANEFEKKGIKLNVASI  583 (663)
T ss_dssp             SEECCCCCCHHHHHHHTTTC---EEEECC--------------TTCSCEEEECTTHHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred             CCCCCCCCCCCCHHHHCCEE---EEEEEC--------------CCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             78887443444344305715---999988--------------999899997319999999999999865998699977