Query gi|254781051|ref|YP_003065464.1| alpha-ketoglutarate decarboxylase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 957
No_of_seqs 189 out of 1404
Neff 4.9
Searched_HMMs 23785
Date Wed Jun 1 01:53:46 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781051.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jgd_A 2-oxoglutarate dehydrog 100.0 0 0 3150.2 78.2 921 1-957 1-931 (933)
2 1umd_A E1-alpha, 2-OXO acid de 100.0 2.5E-35 1.1E-39 285.3 31.9 306 202-544 29-337 (367)
3 2ozl_A PDHE1-A type I, pyruvat 100.0 5.8E-28 2.4E-32 229.6 30.2 329 169-551 1-340 (365)
4 2bfd_A 2-oxoisovalerate dehydr 100.0 3.6E-25 1.5E-29 208.4 28.4 342 202-582 48-394 (400)
5 1qs0_A 2-oxoisovalerate dehydr 99.9 1.7E-22 7.1E-27 188.2 28.8 305 202-544 67-375 (407)
6 1w85_A Pyruvate dehydrogenase 99.9 3.1E-21 1.3E-25 178.7 30.5 295 202-543 37-335 (368)
7 1ik6_A Pyruvate dehydrogenase; 99.4 4.5E-11 1.9E-15 101.8 16.1 304 603-955 50-363 (369)
8 2bfd_B 2-oxoisovalerate dehydr 98.9 5E-07 2.1E-11 71.2 18.5 304 602-955 19-336 (342)
9 2o1s_A 1-deoxy-D-xylulose-5-ph 98.8 1.1E-06 4.7E-11 68.6 18.5 268 603-932 318-589 (621)
10 2e6k_A Transketolase; structur 98.7 3.4E-05 1.4E-09 57.3 23.4 464 332-904 117-610 (651)
11 1umd_B E1-beta, 2-OXO acid deh 98.7 4.5E-06 1.9E-10 64.0 17.7 293 614-955 14-318 (324)
12 1gpu_A Transketolase; transfer 98.7 5.4E-05 2.3E-09 55.8 28.0 468 334-903 117-623 (680)
13 3l84_A Transketolase; TKT, str 98.7 3.2E-05 1.4E-09 57.5 21.5 435 334-877 115-568 (632)
14 1w85_B Pyruvate dehydrogenase 98.6 4.4E-06 1.9E-10 64.1 16.6 296 611-955 10-318 (324)
15 2ozl_B PDHE1-B, pyruvate dehyd 98.6 4.1E-06 1.7E-10 64.3 14.7 290 604-936 15-315 (341)
16 1qs0_B 2-oxoisovalerate dehydr 98.6 1.1E-05 4.7E-10 61.0 16.8 309 613-954 14-331 (338)
17 2o1x_A 1-deoxy-D-xylulose-5-ph 98.6 2.1E-05 8.9E-10 58.9 18.1 265 605-931 323-591 (629)
18 3m49_A Transketolase; alpha-be 98.3 2.4E-05 1E-09 58.4 12.7 474 333-902 140-645 (690)
19 1itz_A Transketolase; calvin c 98.2 0.00066 2.8E-08 47.6 24.0 211 668-905 417-634 (675)
20 2r8o_A Transketolase 1, TK 1; 98.1 0.00066 2.8E-08 47.6 16.8 464 334-888 115-603 (669)
21 1r9j_A Transketolase; domains, 97.1 0.024 1E-06 35.8 24.5 204 667-903 404-614 (673)
22 1v5e_A Pyruvate oxidase; oxido 95.9 0.086 3.6E-06 31.6 9.7 119 331-476 411-539 (590)
23 1yd7_A 2-keto acid:ferredoxin 95.7 0.0015 6.3E-08 44.9 0.0 104 835-957 290-395 (395)
24 3kom_A Transketolase; rossmann 95.5 0.15 6.5E-06 29.7 22.7 443 334-868 117-583 (663)
25 3hww_A 2-succinyl-5-enolpyruvy 95.3 0.061 2.6E-06 32.7 7.2 93 370-477 436-540 (556)
26 2pan_A Glyoxylate carboligase; 95.2 0.15 6.2E-06 29.9 8.8 39 750-788 534-574 (616)
27 2c42_A Pyruvate-ferredoxin oxi 94.7 0.25 1.1E-05 28.1 14.0 26 750-775 1025-1050(1231)
28 2ez9_A Pyruvate oxidase; TPP e 94.5 0.059 2.5E-06 32.8 5.3 20 676-695 420-443 (603)
29 3ju3_A Probable 2-oxoacid ferr 93.2 0.14 6E-06 30.0 5.3 88 837-933 14-104 (118)
30 3eya_A Pyruvate dehydrogenase 92.6 0.27 1.1E-05 27.9 6.1 15 445-459 136-150 (549)
31 2nxw_A Phenyl-3-pyruvate decar 90.5 0.65 2.7E-05 25.0 6.1 43 749-792 498-542 (565)
32 3lq1_A 2-succinyl-5-enolpyruvy 88.5 0.97 4.1E-05 23.6 5.8 10 431-440 521-530 (578)
33 2uz1_A Benzaldehyde lyase; thi 88.3 1.3 5.4E-05 22.7 9.8 37 750-788 504-540 (563)
34 1ozh_A ALS, acetolactate synth 85.9 0.97 4.1E-05 23.7 4.6 23 321-343 72-94 (566)
35 2pgn_A Cyclohexane-1,2-dione h 85.6 1.8 7.4E-05 21.7 6.1 29 750-778 505-533 (589)
36 2c31_A Oxalyl-COA decarboxylas 82.4 2.4 9.9E-05 20.7 9.0 26 751-776 506-531 (568)
37 2x7j_A 2-succinyl-5-enolpyruvy 81.2 0.75 3.2E-05 24.5 2.5 27 750-776 538-564 (604)
38 1t9b_A Acetolactate synthase, 80.9 2.6 0.00011 20.4 7.4 48 750-799 595-644 (677)
39 1ybh_A Acetolactate synthase, 80.3 2.8 0.00012 20.2 10.2 63 749-820 515-579 (590)
40 2iht_A Carboxyethylarginine sy 78.3 3.2 0.00013 19.8 7.9 37 750-788 519-555 (573)
41 1q6z_A BFD, BFDC, benzoylforma 75.5 3.7 0.00016 19.2 7.7 28 251-280 6-33 (528)
42 1l6w_A Fructose-6-phosphate al 75.4 3.7 0.00016 19.2 4.8 58 414-475 24-89 (220)
43 1ovm_A Indole-3-pyruvate decar 75.2 3.8 0.00016 19.2 5.6 17 762-778 502-518 (552)
44 2q28_A Oxalyl-COA decarboxylas 74.1 4 0.00017 19.0 9.2 38 749-788 501-538 (564)
45 2vk8_A Pyruvate decarboxylase 73.8 4.1 0.00017 18.9 5.8 88 248-352 5-92 (563)
46 1bqc_A Protein (beta-mannanase 69.8 1.5 6.5E-05 22.1 1.6 24 448-475 65-88 (302)
47 2wvg_A PDC, pyruvate decarboxy 69.0 5.1 0.00021 18.2 6.8 16 251-266 7-22 (568)
48 2vbf_A Branched-chain alpha-ke 66.4 5.7 0.00024 17.8 8.0 14 764-777 376-389 (570)
49 2vbi_A Pyruvate decarboxylase; 65.2 6 0.00025 17.7 6.7 40 429-472 125-166 (566)
50 2zzd_B Thiocyanate hydrolase s 60.3 6.6 0.00028 17.4 3.3 97 428-536 47-145 (157)
51 3o5v_A X-Pro dipeptidase; crea 59.8 4.6 0.00019 18.6 2.4 32 743-774 1-32 (132)
52 1vpx_A Protein (transaldolase 57.9 7.9 0.00033 16.8 6.3 110 414-527 36-161 (230)
53 1dqz_A 85C, protein (antigen 8 54.9 5.4 0.00023 18.0 2.1 42 725-766 28-69 (280)
54 1wm1_A Proline iminopeptidase; 52.6 9.5 0.0004 16.2 3.8 93 373-475 41-141 (317)
55 1ug7_A 2610208M17RIK protein; 52.4 9.6 0.0004 16.1 5.4 65 192-257 48-112 (128)
56 3fmc_A Putative succinylglutam 50.8 8.5 0.00036 16.5 2.6 65 369-436 36-105 (368)
57 2hrz_A AGR_C_4963P, nucleoside 48.9 11 0.00045 15.7 5.6 85 366-475 10-96 (342)
58 1xrs_A D-lysine 5,6-aminomutas 45.6 12 0.0005 15.4 4.2 49 238-293 46-98 (516)
59 2qv5_A AGR_C_5032P, uncharacte 45.4 12 0.00051 15.4 5.2 151 101-282 68-231 (261)
60 2cks_A Endoglucanase E-5; carb 45.3 8.9 0.00037 16.4 2.0 32 446-477 74-105 (306)
61 1sfr_A Antigen 85-A; alpha/bet 41.5 11 0.00046 15.7 1.9 41 877-918 239-279 (304)
62 3da8_A Probable 5'-phosphoribo 40.6 14 0.00059 14.9 6.3 112 369-507 13-125 (215)
63 2it2_A UPF0130 protein PH1069; 40.5 14 0.0006 14.8 3.2 72 431-514 99-176 (200)
64 1l1s_A Hypothetical protein MT 39.7 15 0.00061 14.8 5.7 37 439-476 7-43 (113)
65 1k0e_A P-aminobenzoate synthas 39.6 4.1 0.00017 18.9 -0.4 26 244-269 191-216 (453)
66 2fb0_A Conserved hypothetical 39.4 5.1 0.00021 18.2 -0.0 28 670-697 31-58 (94)
67 3h9m_A P-aminobenzoate synthet 39.2 3.6 0.00015 19.4 -0.8 78 242-326 161-242 (436)
68 2gff_A LSRG protein; dimeric a 38.3 5 0.00021 18.3 -0.2 30 668-697 26-55 (106)
69 2dvk_A UPF0130 protein APE0816 37.7 16 0.00065 14.5 4.0 72 431-514 84-162 (188)
70 1jr2_A Uroporphyrinogen-III sy 36.6 2.5 0.0001 20.6 -1.9 46 839-885 159-207 (286)
71 7a3h_A Endoglucanase; hydrolas 36.5 12 0.0005 15.4 1.5 18 458-475 86-103 (303)
72 1q8b_A Protein YJCS; structura 36.0 5.1 0.00022 18.2 -0.4 30 668-697 39-68 (105)
73 1i1q_A Anthranilate synthase c 35.9 5.4 0.00023 18.0 -0.3 27 244-270 243-269 (520)
74 3kp1_A D-ornithine aminomutase 35.7 13 0.00056 15.1 1.6 57 368-436 293-350 (763)
75 2qg3_A UPF0130 protein AF_2059 34.6 17 0.00073 14.2 3.2 68 432-514 103-177 (208)
76 1ycd_A Hypothetical 27.3 kDa p 34.3 9 0.00038 16.3 0.6 34 430-463 166-201 (243)
77 2axq_A Saccharopine dehydrogen 33.5 18 0.00075 14.1 3.1 41 427-476 59-99 (467)
78 3f4a_A Uncharacterized protein 33.0 18 0.00077 14.0 2.7 51 740-790 8-58 (169)
79 1u0l_A Probable GTPase ENGC; p 33.0 13 0.00056 15.1 1.3 29 738-766 95-123 (301)
80 1wky_A Endo-beta-1,4-mannanase 32.9 18 0.00077 14.0 2.1 20 249-269 73-92 (464)
81 1h4p_A Glucan 1,3-beta-glucosi 32.8 16 0.00069 14.4 1.7 20 247-266 113-132 (408)
82 3f44_A Putative monooxygenase; 32.7 4.7 0.0002 18.4 -1.0 31 667-697 31-61 (220)
83 16pk_A PGK, 3-phosphoglycerate 32.3 19 0.00079 13.9 3.5 14 160-173 86-99 (415)
84 2ixs_A SDAI restriction endonu 32.1 19 0.00079 13.9 2.0 15 159-173 58-72 (323)
85 1p7h_L Nuclear factor of activ 31.0 13 0.00055 15.1 1.0 19 684-703 219-237 (286)
86 1a9x_A Carbamoyl phosphate syn 30.5 4 0.00017 19.0 -1.7 285 94-464 23-334 (1073)
87 1g41_A Heat shock protein HSLU 30.4 20 0.00084 13.7 3.6 41 488-528 336-380 (444)
88 3n9k_A Glucan 1,3-beta-glucosi 30.4 18 0.00076 14.0 1.6 23 246-269 111-133 (399)
89 1nu0_A Hypothetical protein YQ 29.6 12 0.00051 15.4 0.6 63 160-232 74-138 (138)
90 1wn1_A Dipeptidase; prolidase, 29.0 16 0.00069 14.4 1.2 26 514-540 129-154 (356)
91 2wan_A Pullulanase; hydrolase, 28.6 21 0.00087 13.6 1.7 10 520-529 532-541 (921)
92 1x7v_A PA3566 protein, APC5058 28.5 9.2 0.00039 16.3 -0.1 29 669-697 32-60 (99)
93 3ooo_A Proline dipeptidase; st 28.2 22 0.00091 13.4 2.1 31 745-775 3-33 (132)
94 3lvt_A Glycosyl hydrolase, fam 27.8 22 0.00093 13.4 5.4 42 402-453 401-442 (899)
95 2a6p_A Possible phosphoglycera 27.4 22 0.00094 13.3 4.6 81 240-339 118-206 (208)
96 2zpa_A Uncharacterized protein 27.2 15 0.00062 14.7 0.7 47 581-629 461-517 (671)
97 2e62_A Protein AT5G25060; CWF2 27.0 23 0.00095 13.3 4.3 41 498-538 19-59 (61)
98 3jug_A Beta-mannanase; TIM-bar 26.8 23 0.00096 13.3 2.4 25 445-473 84-108 (345)
99 1zmr_A Phosphoglycerate kinase 26.4 23 0.00098 13.2 2.0 79 648-750 267-350 (387)
100 1wx0_A Transaldolase; structur 26.2 23 0.00099 13.2 4.7 98 414-515 24-146 (223)
101 3e8o_A Uncharacterized protein 26.0 12 0.00052 15.3 0.1 29 669-697 45-73 (119)
102 3lgd_A Adenosine deaminase CEC 25.9 24 0.001 13.2 4.7 138 444-631 269-417 (508)
103 2g5f_A COG0147: anthranilate/p 25.8 7.7 0.00033 16.8 -0.9 35 764-798 217-258 (450)
104 2omo_A DUF176; structural geno 25.8 11 0.00044 15.8 -0.2 29 669-697 49-77 (124)
105 1qdl_A Protein (anthranilate s 25.6 6.8 0.00029 17.2 -1.2 32 766-797 193-231 (422)
106 3dhn_A NAD-dependent epimerase 25.1 24 0.001 13.0 5.1 74 369-474 3-76 (227)
107 2rcn_A Probable GTPase ENGC; Y 24.8 18 0.00077 14.0 0.8 25 740-764 142-166 (358)
108 3mcs_A Putative monooxygenase; 24.6 13 0.00053 15.2 -0.0 24 673-696 37-60 (219)
109 2qj8_A MLR6093 protein; NP_106 24.4 25 0.0011 13.0 2.7 96 370-479 49-147 (332)
110 3os6_A Isochorismate synthase 24.3 13 0.00056 15.0 0.0 11 767-777 159-169 (399)
111 1t9h_A YLOQ, probable GTPase E 24.3 25 0.0011 12.9 1.5 29 738-766 97-125 (307)
112 2fn0_A Salicylate synthetase, 24.3 12 0.00048 15.5 -0.3 25 244-268 176-200 (437)
113 2qjw_A Uncharacterized protein 24.2 25 0.0011 12.9 3.6 37 725-765 4-40 (176)
114 2yv5_A YJEQ protein; hydrolase 23.9 24 0.001 13.1 1.3 26 739-764 91-116 (302)
115 1qh5_A Glyoxalase II, protein 23.8 8.2 0.00034 16.6 -1.1 17 394-410 105-121 (260)
116 1hdo_A Biliverdin IX beta redu 23.6 26 0.0011 12.9 5.2 73 373-476 6-78 (206)
117 1n2s_A DTDP-4-, DTDP-glucose o 23.6 26 0.0011 12.8 4.4 67 371-478 1-67 (299)
118 1q52_A MENB; lyase, structural 23.5 26 0.0011 12.8 4.5 56 305-378 35-90 (314)
119 3i7m_A XAA-Pro dipeptidase; st 23.1 27 0.0011 12.8 2.3 31 745-775 4-34 (140)
120 3hwo_A Isochorismate synthase 22.9 15 0.00062 14.7 0.0 12 766-777 166-177 (394)
121 1qop_A Tryptophan synthase alp 22.6 27 0.0011 12.7 5.5 175 720-929 12-211 (268)
122 1jwq_A N-acetylmuramoyl-L-alan 22.6 27 0.0011 12.7 1.9 26 169-194 131-156 (179)
123 2c46_A MRNA capping enzyme; gu 22.6 23 0.00095 13.3 1.0 13 448-460 123-135 (241)
124 2z26_A Dihydroorotase, dhoase; 22.5 27 0.0011 12.7 2.5 13 257-270 31-43 (347)
125 2bbe_A Hypothetical protein SO 22.4 16 0.00067 14.5 0.1 30 668-697 38-67 (108)
126 2r6i_A AGR_C_2717P, uncharacte 22.2 16 0.00069 14.3 0.2 22 272-297 12-34 (284)
127 3kkf_A Putative antibiotic bio 21.6 16 0.00066 14.5 -0.0 29 669-697 32-60 (105)
128 3cqj_A L-ribulose-5-phosphate 21.6 28 0.0012 12.6 5.2 36 145-182 13-50 (295)
129 2wsk_A Glycogen debranching en 21.5 28 0.0012 12.6 1.6 33 442-474 306-339 (657)
130 2pk3_A GDP-6-deoxy-D-LYXO-4-he 21.0 29 0.0012 12.5 4.9 83 369-484 11-93 (321)
131 1wtj_A Ureidoglycolate dehydro 20.1 30 0.0013 12.4 2.4 151 184-352 13-201 (343)
132 2vzs_A CSXA, EXO-beta-D-glucos 20.1 23 0.00097 13.2 0.6 12 493-504 451-462 (1032)
No 1
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=0 Score=3150.22 Aligned_cols=921 Identities=44% Similarity=0.755 Sum_probs=866.6
Q ss_pred CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 96238899983476367896899999999873805079899999873676433333343444322222222111233344
Q gi|254781051|r 1 MLQDLNKMFSLSSFLDGTNCCYIEDLYKSYQEDPSSVCKDWYPLFSFLDENSEEYDNLEDGIASFLKEESVASAVFSQKK 80 (957)
Q Consensus 1 M~~~~~~~f~~sSFL~g~Na~YIEeLYekYL~DP~SVd~sWr~fF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (957)
|++++|+.|++||||+|+|++|||+||++|++||+|||++|+.||++++.+............ ........
T Consensus 1 M~~s~~k~~l~sSFL~G~Na~YIEeLYe~Yl~DP~SVd~sWr~yF~~l~~~~~~~~~~~s~~~---------~~~~~~~~ 71 (933)
T 2jgd_A 1 MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTR---------EYFRRLAK 71 (933)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHH---------HHHHHHHC
T ss_conf 983488999864566788999999999999649876689999999738666788543344226---------66655302
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCEEECCCCC-CCCC
Q ss_conf 555666555633678999999999999988170454016777777667877678766699978817157256657-8777
Q gi|254781051|r 81 SAVESSCSLGETQSVKDFFQVMKMIDAYRSYGHFKANIDPLGYNSHQKDLSELSPAHYGFVKADYDRKICMKGVL-GLES 159 (957)
Q Consensus 81 ~~~~~~~~~~~~~~~~kq~rV~~LI~AYR~~GHl~A~lDPLgl~~~~~~~peL~~~~yGLse~DLd~~f~~~~~~-g~~~ 159 (957)
.+........+...+.++++|.+||+|||.+||+.|+||||++.. ++.+|+|+|++|||+++|||++|.++++. |.+.
T Consensus 72 ~~~~~~~~~~~~~~~~kq~~v~~LI~AYR~~GHl~A~LDPL~l~~-~~~~~eL~~~~~GLse~DLd~~f~~~~~~~g~~~ 150 (933)
T 2jgd_A 72 DASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQ-QDKVADLDPSFHDLTEADFQETFNVGSFASGKET 150 (933)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHGGGGSCCCSSSCCC-CC---CCSSGGGGCCC-CTTSEEECTTCC---CE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC-CCCCCCCCHHHCCCCHHHHCCEEECCCCCCCCCC
T ss_conf 455556666764667889999999999998561001689999988-8889877974469897994880305766678787
Q ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC
Q ss_conf 78999999999840643027772489989999999984145778887988999999999999989999986403362222
Q gi|254781051|r 160 ATIPEIVDVLSHLYCSNIGVEFMHIVDSIERDWVRNTIEDYDFSSNFSKEEQRDILDKLVRAEGFEKFIDIKYKGAKRFG 239 (957)
Q Consensus 160 ~tL~eIi~~L~~tYCgsIGvEymHI~d~eer~Wlq~riE~~~~~~~~s~eeK~~iL~~L~~Ae~FE~FL~~Kf~g~KRFs 239 (957)
+||+|||++|++||||+||+|||||.|++||+|||+|||+. .+.|++++|++||++|++||+||+|||+||||+||||
T Consensus 151 ~tL~eIi~~L~~~YCgsIG~EymHI~d~eer~Wl~~riE~~--~~~~s~eeK~~iL~~L~~ae~FE~FL~~Kf~g~KRFs 228 (933)
T 2jgd_A 151 MKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIESG--RATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFS 228 (933)
T ss_dssp EEHHHHHHHHHHHHHSSEEEECSSCCCHHHHHHHHHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCC
T ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 73999999999875464404432579999999999998722--7789979999999999999999999987547760673
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 56465899999999999873791079980676552689998853798999998558874322345551001502688983
Q gi|254781051|r 240 ADGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVLSQIMNKLPRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNRQI 319 (957)
Q Consensus 240 LEG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL~Nvl~Kp~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~~~ 319 (957)
|||||||||+|++||+.|++.||++||||||||||||||+|||+||++.||+||+|+.. ...++||||||||+|+++++
T Consensus 229 lEG~EslIp~l~~li~~~~~~gv~~iviGMaHRGRLNvL~nvl~Kp~~~iF~EF~g~~~-~~~~sGDVKYHlG~s~~~~~ 307 (933)
T 2jgd_A 229 LEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHK-EHLGTGDVKYHMGFSSDFQT 307 (933)
T ss_dssp CTTCTTHHHHHHHHHHHHHTTTCCEEEEECCSTTHHHHHHHTTCCCHHHHHHHHHTCC---CCSCCCCGGGCCEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHCCCCC-CCCCCCCCCCCCCEEEEECC
T ss_conf 47701299999999999975598359983134440578998755899999997527763-12456772225740100015
Q ss_pred CCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 59618999717877310004455323677776416665445556544540478886257533346725887645106774
Q gi|254781051|r 320 CGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGY 399 (957)
Q Consensus 320 ~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY 399 (957)
+|++|||+|++||||||+|||||+|+||||||+++|. ++++|||||||||||||||||||||||||+|+||
T Consensus 308 ~g~~v~lsL~~NPSHLE~VnPVv~G~~RA~Q~~~~~~---------~~~kvlpIliHGDAAf~GQGVV~Etl~ls~l~gY 378 (933)
T 2jgd_A 308 DGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEP---------SSNKVLPITIHGDAAVTGQGVVQETLNMSKARGY 378 (933)
T ss_dssp TTEEEEEEECCCCSSTTCHHHHHHHHHHHHHTTSSSC---------CGGGEEEEEEEEHHHHHHCTHHHHHHHHTTSTTT
T ss_pred CCCEEEEEECCCCCCCEECCCEEECEEEEEEEECCCC---------CCCEEEEEEEECCHHHCCCCHHHHHHHCCCCCCC
T ss_conf 9976999961697410100653411035777202688---------8762566786252664247625876405457886
Q ss_pred CCCCEEEEEECCCEECCC-CCHHCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 436579998416020124-7010246778400112203405874267889999999999999997389739986421125
Q gi|254781051|r 400 TVAGNIHLIINNQIGFTT-NPSSARSCTYASDISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRF 478 (957)
Q Consensus 400 ~tGGTiHiVvNNQIGFTT-~p~d~RSs~Y~TDiAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~ 478 (957)
+||||||||||||||||| +|+|+|||+||||||||++||||||||||||||++|++||++||++|+|||||||||||||
T Consensus 379 ~tGGTiHiivNNQIGFTT~~p~d~RSs~YctDiAK~~~aPI~HVN~DdpEav~~a~~lA~~yR~~F~kDVvIDlvcYRR~ 458 (933)
T 2jgd_A 379 EVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRH 458 (933)
T ss_dssp CCSCCEEEEEECC---------------CGGGGGGTTTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_pred CCCCEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf 55864899854877513798321335776205888727977896489989999999999999999688727855653146
Q ss_pred CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-------C
Q ss_conf 656435422355788888671899899999998644898989999999999999775666541258765666-------6
Q gi|254781051|r 479 GHNEGDEPSFTQPMMYKTIRSHKSVLQLYADSLMKNQVISKQELQSLANNWHKYLEAEYKESESYCPEKLGL-------L 551 (957)
Q Consensus 479 GHNE~DeP~fTQP~mY~~I~~hp~v~~~Y~~~Li~~g~it~~e~~~~~~~~~~~l~~~~~~~k~~~~~~~~~-------~ 551 (957)
||||+|||+||||+||++|++|||++++|+++|+++|+||+++++++.++|++.|+++++.++++.+....+ .
T Consensus 459 GHNE~DeP~fTQP~mY~~I~~hp~v~~~Y~~~Li~eg~it~~e~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (933)
T 2jgd_A 459 GHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLN 538 (933)
T ss_dssp -----------CCTTHHHHHTSCCHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHTSCCCTTEECCCGGGCTTGGGSS
T ss_pred CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 88977787888976766654599889999998741687678999999999999999878887655522455444455678
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 56862666778999999998874368998620567788899899873343564211478988898863583157850100
Q gi|254781051|r 552 HNGENERKNSVSKEILKKIGSSIIRLPKSFNTHKIVERLMANRQKMIETGKGIDWSMAESLAFGSLCYEGYKVRLSGQDC 631 (957)
Q Consensus 552 ~~~~~~~~T~v~~~~L~~i~~~l~~~Pe~f~~h~~v~k~~~~R~~~~~~~~~iDW~~AE~LA~~SLl~eG~~VRlsGQD~ 631 (957)
..+...++|||+.+.|++|+++++++|++|++||+|+|++++|++|++++.+|||||||+|||||||.||++||||||||
T Consensus 539 ~~~~~~~~Tgv~~~~L~~l~~~l~~~P~~f~~h~kv~ki~~~R~~~~~~~~~iDWa~AE~LAfgSLL~eG~~VRLSGQD~ 618 (933)
T 2jgd_A 539 HEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDS 618 (933)
T ss_dssp CCTTCCCCCCCCHHHHHHHHHHTTCCCTTSCCCHHHHHHHHHHHHHHTTSSCBCHHHHHHHHHHHHHTTTCCEEEEETTT
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCC
T ss_conf 65555678877899999999998418844341056778999999985068876277899999999997697610025645
Q ss_pred CCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHH
Q ss_conf 22333230279997788844556344278984599982431111013432022113865311100002442454102256
Q gi|254781051|r 632 ERGTFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGYSLNNLNALTIWEAQFGDFANGAQVILD 711 (957)
Q Consensus 632 ~RGTFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~p~~L~iWEAQFGDF~NgAQviiD 711 (957)
+||||||||||||||+|+++|+||+||+++|++|+||||+|||+||||||||||+++|++|||||||||||+||||||||
T Consensus 619 ~RGTFShRHavl~Dq~t~~~y~PL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~p~~LviWEAQFGDF~NgAQviiD 698 (933)
T 2jgd_A 619 GRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVID 698 (933)
T ss_dssp TTCTTSCCCCSEECSSSSCEECGGGCSCTTCCCEEEECCCSCHHHHHHHHHHHHHHCTTSEEEEEC-CGGGGGGGHHHHH
T ss_pred CCCCCCCCCEEEEECCCCCEEEEHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHH
T ss_conf 66543323136760577734753101666788738874622166665655221336873130234453244454234355
Q ss_pred HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECC
Q ss_conf 55420257623336813543688888887656440578875214378269724889999999999743534886898566
Q gi|254781051|r 712 QFITAGEQKWLCTSNLVCLLPHGYEGQGPEHSSARLERFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAP 791 (957)
Q Consensus 712 qfiss~e~KW~~~sglvllLPHGyeGqGPEHSSaRlERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tP 791 (957)
|||||||+||+|+|||||||||||||||||||||||||||||||++|||||||||||||||+|||||+|+||||||||||
T Consensus 699 qfi~sge~KW~~~sglvllLPHGyeGqGPEHSSaR~ERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tP 778 (933)
T 2jgd_A 699 QFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSP 778 (933)
T ss_dssp HTTTTHHHHHCCCCCCEEEEECCCSSSCTTSSCCCHHHHHHTCCTTCCEEECCCSHHHHHHHHHHHHHSSCCCCEEEEEC
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCCCCEEEECC
T ss_conf 56421777756457758973788888897655402889999754268589746975999999999851457888699685
Q ss_pred CHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECC
Q ss_conf 02210801268878937998603515776433444544457954576899868857899999999769986899984014
Q gi|254781051|r 792 KSLLRHKRVVSSLSDMTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRRVILCTGKVYYDLLDNRDMRNIADIYLLRIEQL 871 (957)
Q Consensus 792 KsLLR~~~a~S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~rvi~csGKvyydL~~~r~~~~~~~vaivRiEqL 871 (957)
|||||||.|+|+|+||++|| |++||+|+. ..+|++|||||||||||||||+++|++++.+||||||||||
T Consensus 779 KsLLR~~~a~S~l~e~~~g~-F~~vi~d~~---------~~~~~~v~rvi~csGKvyydL~~~r~~~~~~~vaivRiEQL 848 (933)
T 2jgd_A 779 KSLLRHPLAVSSLEELANGT-FLPAIGEID---------ELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQL 848 (933)
T ss_dssp SGGGGCTTCCBCHHHHHHCC-CCSEECCCS---------CCCGGGCCEEEEECTTHHHHHHHHHHHTTCCSEEEEEECEE
T ss_pred HHHHCCCCCCCCHHHHCCCC-CEEECCCCC---------CCCHHCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf 67655865579989917996-156368756---------57851198899907799999999999779998799985004
Q ss_pred CCCHHHHHHHHHHHCCCC-EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
Q ss_conf 868289999998537998-3998067853178457899769999875056776018975366467233867899999999
Q gi|254781051|r 872 YPFPEDYLIKVLSRFVQA-EIVWCQEEPQNMGAWTFIEPYLEKVLHSIGADYSRVRYVGRLPSASTAVGHMSRHLEQLSS 950 (957)
Q Consensus 872 yPfP~~~l~~~l~~y~~~-e~vW~QEEp~N~GaW~~v~~rl~~~l~~~~~~~~~~~y~gR~~~aspA~G~~~~H~~e~~~ 950 (957)
||||+++|+++|++|||+ |||||||||+|||||+||+|||++++. ...+++|||||++||||||+.++|++||++
T Consensus 849 yPfP~~~l~~~l~~y~n~~~~vW~QEEp~N~GaW~~v~~rl~~~~~----~~~~l~yvgR~~~aspA~G~~~~H~~eq~~ 924 (933)
T 2jgd_A 849 YPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIP----FGASLRYAGRPASASPAVGHMSVHQKQQQD 924 (933)
T ss_dssp ESCCHHHHHHHHGGGTTCCEEEEEEEEETTSTTHHHHHHHHHTTSC----TTCEEEEEEECCCSSSSCSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHC----CCCCEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf 8998899999998589998589962465646768779999999853----699537858888788877798999999999
Q ss_pred HHHHHHC
Q ss_conf 9998719
Q gi|254781051|r 951 FIEDALK 957 (957)
Q Consensus 951 li~~a~~ 957 (957)
||++||.
T Consensus 925 i~~~a~~ 931 (933)
T 2jgd_A 925 LVNDALN 931 (933)
T ss_dssp HHHHHHC
T ss_pred HHHHHHC
T ss_conf 9999858
No 2
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=100.00 E-value=2.5e-35 Score=285.27 Aligned_cols=306 Identities=18% Similarity=0.212 Sum_probs=262.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEE--CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
Q ss_conf 78887988999999999999989999986403-36222--2564658999999999998737910799806765526899
Q gi|254781051|r 202 FSSNFSKEEQRDILDKLVRAEGFEKFIDIKYK-GAKRF--GADGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVL 278 (957)
Q Consensus 202 ~~~~~s~eeK~~iL~~L~~Ae~FE~FL~~Kf~-g~KRF--sLEG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL 278 (957)
..+.+|+|+.+.+|+.|+.+..||.++...|. |...| +..|-|+.-.++-..++.. .+.+++ .||++...|
T Consensus 29 ~~~~ls~e~l~~~yr~M~~~R~~e~~~~~l~~qG~i~~~~~~~GqEa~~vg~~~al~~~-----~D~~~~-~yR~~g~~l 102 (367)
T 1umd_A 29 FPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPG-----FDWVFP-YYRDHGLAL 102 (367)
T ss_dssp SCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCCCCCTTCHHHHHHHHHHSCTT-----TSEEEC-CTTTHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCC-----CCEEEE-CHHHHHHHH
T ss_conf 89998999999999999999999999999997798440168898699999999974989-----988984-533699999
Q ss_pred HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 98853798999998558874322345551001502688983596189997178773100044553236777764166654
Q gi|254781051|r 279 SQIMNKLPRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVG 358 (957)
Q Consensus 279 ~Nvl~Kp~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~ 358 (957)
+. |-+++.|++|+.|+..... ...+...|++.. ...+.-+..+..|++ |++.|.+-|.+....
T Consensus 103 a~--G~~~~~~~ae~~gk~~g~~-~Gr~gs~H~~~~------~~~~~~~~~~vg~~~----p~a~G~A~a~k~~~~---- 165 (367)
T 1umd_A 103 AL--GIPLKELLGQMLATKADPN-KGRQMPEHPGSK------ALNFFTVASPIASHV----PPAAGAAISMKLLRT---- 165 (367)
T ss_dssp HH--TCCHHHHHHHHHTBTTCTT-TTCSCSSCCCBT------TTTBCCCCSSTTTTH----HHHHHHHHHHHHTTC----
T ss_pred HC--CCCHHHHHHHHHCCCCCCC-CCCCCCEECCCC------CCCCCCCCCCHHCCC----CCHHHHHHHHHHHCC----
T ss_conf 74--5749999999864378988-998761113400------047055453120046----613348887653136----
Q ss_pred CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCC
Q ss_conf 45556544540478886257533346725887645106774436579998416020124701024677840011220340
Q gi|254781051|r 359 EKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIP 438 (957)
Q Consensus 359 ~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aP 438 (957)
+.+.+..+||+|. +||+++|+|||+.+..+- .|+||.|||+|++|..++.+++.+.++.|+.++.|
T Consensus 166 ----------~~v~v~~~GDGa~-~eG~f~EalN~A~~~~lP---vifv~eNN~yaist~~~~~~~~~~~~~~a~~~gi~ 231 (367)
T 1umd_A 166 ----------GQVAVCTFGDGAT-SEGDWYAGINFAAVQGAP---AVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIP 231 (367)
T ss_dssp ----------CCCEEEEEETGGG-GSHHHHHHHHHHHHTTCS---EEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSC
T ss_pred ----------CCEEEEECCCCCC-CCCHHHHHHHHHHHCCCC---CCEEEECCCCCCCCCCHHCCCCCHHHHHHHHCCCC
T ss_conf ----------9859997369876-565799999999731777---61686048754456730013773564343326865
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC
Q ss_conf 58742678899999999999999973897399864211256564354223557888886718998999999986448989
Q gi|254781051|r 439 IFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPSFTQPMMYKTIRSHKSVLQLYADSLMKNQVIS 518 (957)
Q Consensus 439 I~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~fTQP~mY~~I~~hp~v~~~Y~~~Li~~g~it 518 (957)
.++|||.||++|..+++.|+++..+++++++|++.|||.+||++.|+|....|..+-..-+...+...+.+.|+++|++|
T Consensus 232 ~~~vdG~D~~av~~a~~~A~~~~r~g~gP~lie~~tyR~~gHs~~Dd~~~YR~~~e~~~~~~~DPi~~~~~~L~~~g~~~ 311 (367)
T 1umd_A 232 GYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWRKKDPIPRFRRFLEARGLWN 311 (367)
T ss_dssp EEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECCCCSCSSTTCCGGGTSCHHHHHHHHTTCHHHHHHHHHHTTTCCC
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCC
T ss_conf 38857850888999999999999718999798541106888788885143011778778854998999999999879999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 89999999999999775666541258
Q gi|254781051|r 519 KQELQSLANNWHKYLEAEYKESESYC 544 (957)
Q Consensus 519 ~~e~~~~~~~~~~~l~~~~~~~k~~~ 544 (957)
+++++++.++.++.++++++.+++-.
T Consensus 312 ~~~~~~i~~e~~~ev~~a~~~A~~~p 337 (367)
T 1umd_A 312 EEWEEDVREEIRAELERGLKEAEEAG 337 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999998679
No 3
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=99.97 E-value=5.8e-28 Score=229.58 Aligned_cols=329 Identities=19% Similarity=0.200 Sum_probs=262.2
Q ss_pred HHHHHCCCEEEEEE----CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE----CC
Q ss_conf 99840643027772----48998999999998414577888798899999999999998999998640336222----25
Q gi|254781051|r 169 LSHLYCSNIGVEFM----HIVDSIERDWVRNTIEDYDFSSNFSKEEQRDILDKLVRAEGFEKFIDIKYKGAKRF----GA 240 (957)
Q Consensus 169 L~~tYCgsIGvEym----HI~d~eer~Wlq~riE~~~~~~~~s~eeK~~iL~~L~~Ae~FE~FL~~Kf~g~KRF----sL 240 (957)
|+..|...+.+|+. |..+ |.+...+.+|+|+.+.++++|+.+-.||..+..-|..-|-. .-
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~l~-----------~~p~~~~~ls~e~ll~~yr~M~~~R~~ee~~~~l~~qG~i~g~~h~~ 69 (365)
T 2ozl_A 1 MRGSFANDATFEIKKCDLHRLE-----------EGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLC 69 (365)
T ss_dssp ---CCCSEEEEECCCCEEESCS-----------CCSCSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCCCCC
T ss_pred CCCCCCCCCEEECCCCCCCCCC-----------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9876778644650455321257-----------79987788799999999999999999999999999779886064588
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEC
Q ss_conf 64658999999999998737910799806765526899988537989999985588743223455510015026889835
Q gi|254781051|r 241 DGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVLSQIMNKLPRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNRQIC 320 (957)
Q Consensus 241 EG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL~Nvl~Kp~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~~~~ 320 (957)
-|-|+.-.++ +....-++.++++ ||+.--.|+. |-++..+|+|+.|+......| +.--.|+. +
T Consensus 70 ~GqEA~~vg~------~~~l~~~D~v~~~-yR~~~~~la~--G~~~~~~~ae~~g~~~g~~~G-~~~~~h~~--~----- 132 (365)
T 2ozl_A 70 DGQEACCVGL------EAGINPTDHLITA-YRAHGFTFTR--GLSVREILAELTGRKGGCAKG-KGGSMHMY--A----- 132 (365)
T ss_dssp TTCHHHHHHH------HHTSCTTSEEECC-SCCHHHHHHT--TCCHHHHHHHHTTCTTSTTTT-SSCTTCCC--B-----
T ss_pred CCHHHHHHHH------HHHCCCCCEECCC-CHHHHHHHHH--CCCHHHHHHHHCCCCCCCCCC-CCCCCCCC--C-----
T ss_conf 8779999999------9867965785345-0278999981--886799999863887778999-97836434--6-----
Q ss_pred CCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 96189997178773100044553236777764166654455565445404788862575333467258876451067744
Q gi|254781051|r 321 GKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYT 400 (957)
Q Consensus 321 g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~ 400 (957)
+ .+.+-.|++-..-|++.|.+.|.+.+..+ -+.+...||+|.+ ||+++|+|||+.+-.-
T Consensus 133 -~----~~~~~~~ivg~~~p~AvG~A~a~k~~~~~--------------~v~v~~~GDGa~~-eG~f~EalN~A~~~~L- 191 (365)
T 2ozl_A 133 -K----NFYGGNGIVGAQVPLGAGIALACKYNGKD--------------EVCLTLYGDGAAN-QGQIFEAYNMAALWKL- 191 (365)
T ss_dssp -T----TBCCCCCSTTTHHHHHHHHHHHHHHHTCC--------------CCEEEEEETTGGG-CHHHHHHHHHHHHTTC-
T ss_pred -C----CCCCCCCCCCCCHHHHHHHHHHHHHHCCC--------------CEEEEECCCCCCC-CCHHHHHHHHHHHCCC-
T ss_conf -7----81777760205456999999999975899--------------6799971798744-3459999998863489-
Q ss_pred CCCEEEEEECCCEECCCCCHH-CCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 365799984160201247010-2467784001122034058742678899999999999999973897399864211256
Q gi|254781051|r 401 VAGNIHLIINNQIGFTTNPSS-ARSCTYASDISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFG 479 (957)
Q Consensus 401 tGGTiHiVvNNQIGFTT~p~d-~RSs~Y~TDiAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~G 479 (957)
..|.||.|||.+.+|...+ .++..+..+ ....|.++|+|.||++|..+++-|+++..+.++.++|.+.|||.+|
T Consensus 192 --Pvlfv~enN~yaist~~~~~~~~~~~~~~---~~~~~~~~vDGnD~~av~~~~~~a~~~~R~g~gP~lie~~TyR~~g 266 (365)
T 2ozl_A 192 --PCIFICENNRYGMGTSVERAAASTDYYKR---GDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHG 266 (365)
T ss_dssp --CEEEEEEECSEETTEEHHHHCSCCCGGGT---TTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECCCSSC
T ss_pred --CEEEEEECCCCCCCCCHHHHCCCHHHHHH---CCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
T ss_conf --86999941775677877870556789984---0476059835776214899999999999725898899998874788
Q ss_pred CCCCCCCC-CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCC
Q ss_conf 56435422-35578888867189989999999864489898999999999999977566654125-87656666
Q gi|254781051|r 480 HNEGDEPS-FTQPMMYKTIRSHKSVLQLYADSLMKNQVISKQELQSLANNWHKYLEAEYKESESY-CPEKLGLL 551 (957)
Q Consensus 480 HNE~DeP~-fTQP~mY~~I~~hp~v~~~Y~~~Li~~g~it~~e~~~~~~~~~~~l~~~~~~~k~~-~~~~~~~~ 551 (957)
|.+.|++. +--+..++..+++..+...+.++|+++|++|+++++++.++.++.++++++.++.- .|.....+
T Consensus 267 Hs~~D~~~~YR~~~E~~~~~~k~DPi~~~~~~Li~~g~~s~~el~~i~~ei~~eV~~A~~~A~~~p~P~~e~l~ 340 (365)
T 2ozl_A 267 HEMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELG 340 (365)
T ss_dssp SSTTCCSCSSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHSCCCCGGGTT
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 78888753336789998787518999999999998799999999999999999999999999828896999998
No 4
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, ketoacid dehydrogenase, branched-chain, multi- enzyme complex, acylation; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=99.96 E-value=3.6e-25 Score=208.42 Aligned_cols=342 Identities=13% Similarity=0.119 Sum_probs=263.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCE--ECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
Q ss_conf 7888798899999999999998999998640-33622--22564658999999999998737910799806765526899
Q gi|254781051|r 202 FSSNFSKEEQRDILDKLVRAEGFEKFIDIKY-KGAKR--FGADGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVL 278 (957)
Q Consensus 202 ~~~~~s~eeK~~iL~~L~~Ae~FE~FL~~Kf-~g~KR--FsLEG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL 278 (957)
..+.+++|+-+.+++.|+.+..||..+..-| -|.=. .++-|-|+.-.++ ++...-++.++++ ||+.--.|
T Consensus 48 ~~~~ls~e~ll~~yr~M~~~R~~d~~~~~l~rqG~i~~~~~~~GqEA~~vg~------a~aL~~~D~v~~~-yR~~g~~l 120 (400)
T 2bfd_A 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGS------AAALDNTDLVFGQ-AREAGVLM 120 (400)
T ss_dssp GCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCCCCCTTCHHHHHHH------HHTSCTTSEEECC-SCCHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHH------HHHCCCCCEEECC-CHHHHHHH
T ss_conf 4799899999999999999999999999998589701461898879999999------9966998988756-11789999
Q ss_pred HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 98853798999998558874322345551001502688983596189997178773100044553236777764166654
Q gi|254781051|r 279 SQIMNKLPRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVG 358 (957)
Q Consensus 279 ~Nvl~Kp~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~ 358 (957)
+. |.+++.+|+|+-|+......| .+--.|+|.- + +.+.+-.|.+-.--|.+.|.+.|.+....
T Consensus 121 ~r--G~~~~~~~ae~~g~~~g~~~G-r~g~~H~~~~--------~--~~~~~~~~~vg~q~p~AvG~A~a~k~~~~---- 183 (400)
T 2bfd_A 121 YR--DYPLELFMAQCYGNISDLGKG-RQMPVHYGCK--------E--RHFVTISSPLATQIPQAVGAAYAAKRANA---- 183 (400)
T ss_dssp HT--TCCHHHHHHHHHTCTTCTTTT-CSCSSCCCBT--------T--TTBCCCCSSTTTHHHHHHHHHHHHHHHTC----
T ss_pred HC--CCCHHHHHHHHHHCCCCCCCC-CCCEEECCCH--------H--HCCCCCCCHHCCCCCHHHHHHHHHHHCCC----
T ss_conf 82--898999999973005777788-8761203452--------3--16277774031575601137889874378----
Q ss_pred CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCC
Q ss_conf 45556544540478886257533346725887645106774436579998416020124701024677840011220340
Q gi|254781051|r 359 EKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIP 438 (957)
Q Consensus 359 ~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aP 438 (957)
+-+.|...||+|.+ ||.++|+|||+.+-.. -+|.||.|||.+..|...+..++..-.+.|+.++.|
T Consensus 184 ----------~~v~v~~~GDGa~s-eG~fhEalN~Aa~~~l---Pvifv~eNN~yaistp~~~q~~~~~i~~ra~~yGi~ 249 (400)
T 2bfd_A 184 ----------NRVVICYFGEGAAS-EGDAHAGFNFAATLEC---PIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIM 249 (400)
T ss_dssp ----------CCCEEEEEETTGGG-SHHHHHHHHHHHHTTC---CEEEEEEECSEETTEEGGGTCSSSTTGGGTGGGTCE
T ss_pred ----------CCCEEEEECCCCCC-CCCHHHHHHHHHHCCC---CEEEEEECCCCCCCCCHHHHHCHHHHHHHCCCCCCC
T ss_conf ----------87305621687345-4519999999875067---448987237433467604441113453330004565
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCH-HHHHHHHHCCCHHHHHHHHHHHCCCC
Q ss_conf 58742678899999999999999973897399864211256564354223557-88888671899899999998644898
Q gi|254781051|r 439 IFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPSFTQP-MMYKTIRSHKSVLQLYADSLMKNQVI 517 (957)
Q Consensus 439 I~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~fTQP-~mY~~I~~hp~v~~~Y~~~Li~~g~i 517 (957)
.++|+|.|++||..+++-|+++-.+-++.++|.++|||..||...|||..--+ .-.+..+++..+...+.+.|+++|++
T Consensus 250 ~~~VDG~D~~av~~a~~~A~~~ar~g~gP~lie~~tyR~~~Hs~sDD~~~YR~~~Ei~~w~~~ddPi~~~~~~L~~~g~~ 329 (400)
T 2bfd_A 250 SIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWW 329 (400)
T ss_dssp EEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCC--CC-------------------CCHHHHHHHHHTTTTCC
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC
T ss_conf 16762788899999999999865405999899975464788888888534458889999996088999999999986999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 98999999999999977566654125-876566665686266677899999999887436899862
Q gi|254781051|r 518 SKQELQSLANNWHKYLEAEYKESESY-CPEKLGLLHNGENERKNSVSKEILKKIGSSIIRLPKSFN 582 (957)
Q Consensus 518 t~~e~~~~~~~~~~~l~~~~~~~k~~-~~~~~~~~~~~~~~~~T~v~~~~L~~i~~~l~~~Pe~f~ 582 (957)
++++.+++.++.++.++++++.++.. .|.+...+.+-..+...- -.+.-+++.+.+-+.||...
T Consensus 330 ~~e~~~~i~~e~~~ev~~a~~~A~~~p~P~~~~l~~~VY~~~~~~-l~eq~~~~~~~~~~~~e~y~ 394 (400)
T 2bfd_A 330 DEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQ-LRKQQESLARHLQTYGEHYP 394 (400)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHSCBCCGGGGSTTSSSSCCHH-HHHHHHHHHHHHHHHGGGSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHH-HHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999999999999998089969899985623699976-99999999999997756588
No 5
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=99.93 E-value=1.7e-22 Score=188.23 Aligned_cols=305 Identities=16% Similarity=0.123 Sum_probs=242.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE---ECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
Q ss_conf 788879889999999999999899999864033622---22564658999999999998737910799806765526899
Q gi|254781051|r 202 FSSNFSKEEQRDILDKLVRAEGFEKFIDIKYKGAKR---FGADGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVL 278 (957)
Q Consensus 202 ~~~~~s~eeK~~iL~~L~~Ae~FE~FL~~Kf~g~KR---FsLEG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL 278 (957)
..+.+++|+-+.+|+.|+.+-.||..+..-|-.-|- .+.-|-|+.-.++-. ...-++.++ ..||+.=-.|
T Consensus 67 ~~~~l~~e~l~~~yr~M~~~R~~d~~~~~l~rqG~i~f~~~~~GqEA~~vg~~~------al~~~D~~f-~~yR~~g~~l 139 (407)
T 1qs0_A 67 WAEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEAIGSGQAL------ALNRTDMCF-PTYRQQSILM 139 (407)
T ss_dssp GGSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCCCCCTTTHHHHHHHHH------HSCTTSEEE-CCSSCHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH------HCCCCCEEE-ECCCHHHHHH
T ss_conf 789989999999999999999999999999977985465899881999999998------678778894-2644599999
Q ss_pred HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 98853798999998558874322345551001502688983596189997178773100044553236777764166654
Q gi|254781051|r 279 SQIMNKLPRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVG 358 (957)
Q Consensus 279 ~Nvl~Kp~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~ 358 (957)
+- |-|+..+|+|+.|+......|. .-.-|++.- ...+.+--|.+-+--|++.|.+-|.+.+..+
T Consensus 140 ar--G~~~~~~~~e~~g~~~g~~~Gr-~~~~H~~~~----------~~~~~~~s~~vg~q~p~AvG~A~a~k~~~~~--- 203 (407)
T 1qs0_A 140 AR--DVSLVEMICQLLSNERDPLKGR-QLPIMYSVR----------EAGFFTISGNLATQFVQAVGWAMASAIKGDT--- 203 (407)
T ss_dssp HT--TCCHHHHHHHHHTCTTCTTTTC-SCTTCCCBG----------GGTBCCCCSSSSHHHHHHHHHHHHHHHTTCC---
T ss_pred HC--CCCHHHHHHHHHCCCCCCCCCC-CCEEEECCH----------HCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC---
T ss_conf 81--7169999999837788998999-854221330----------0286777741202304544889988870899---
Q ss_pred CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCC-CCCCCHHHHHHCC
Q ss_conf 455565445404788862575333467258876451067744365799984160201247010246-7784001122034
Q gi|254781051|r 359 EKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARS-CTYASDISKSIGI 437 (957)
Q Consensus 359 ~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RS-s~Y~TDiAK~i~a 437 (957)
-+.+...||+|. .||.++|+|||+.+...- .|-||.|||.+..|.....++ +..-.+.|+.++.
T Consensus 204 -----------~v~v~~~GDGat-~eG~f~EalN~As~~~lP---vifv~eNN~yaist~~~~~~~~~~~~a~ra~~~Gi 268 (407)
T 1qs0_A 204 -----------KIASAWIGDGAT-AESDFHTALTFAHVYRAP---VILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGI 268 (407)
T ss_dssp -----------CCEEEEEETGGG-GSHHHHHHHHHHHHHTCC---EEEEEEECSEETTEEGGGGTTTTCCSTHHHHHTTC
T ss_pred -----------CEEEECCCCCCC-CCCCHHHHHHHHHHCCCC---EEEEEEECCCCCCCHHHHHHCCCCHHHHHHHCCCC
T ss_conf -----------735540699854-557399999999863785---47999746766553044441331059887632688
Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC
Q ss_conf 05874267889999999999999997389739986421125656435422355788888671899899999998644898
Q gi|254781051|r 438 PIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPSFTQPMMYKTIRSHKSVLQLYADSLMKNQVI 517 (957)
Q Consensus 438 PI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~fTQP~mY~~I~~hp~v~~~Y~~~Li~~g~i 517 (957)
|.++|+|.|+.+|..+++-|+++-.+-++.++|.++|||-.||...|||..-.|.---.--+...+...+.+.|++.|++
T Consensus 269 ~~~~vDGnD~~av~~a~~~A~~~aR~g~gP~lIe~~TyR~~gHs~sDD~~~YR~~~Ei~~w~~~DPi~rl~~~L~~~g~~ 348 (407)
T 1qs0_A 269 ASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLGDPIARLKQHLIKIGHW 348 (407)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCCSCSSTTCCGGGTSCTTHHHHCTTCCHHHHHHHHHHHTTSC
T ss_pred CEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC
T ss_conf 71576587589999999999999982899679998620698887878745788999999988379799999999987999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 989999999999999775666541258
Q gi|254781051|r 518 SKQELQSLANNWHKYLEAEYKESESYC 544 (957)
Q Consensus 518 t~~e~~~~~~~~~~~l~~~~~~~k~~~ 544 (957)
++++.+++.++.++..+++++.++...
T Consensus 349 ~e~e~~~i~~e~~~eV~~a~~~Ae~~~ 375 (407)
T 1qs0_A 349 SEEEHQATTAEFEAAVIAAQKEAEQYG 375 (407)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999998621
No 6
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=99.92 E-value=3.1e-21 Score=178.66 Aligned_cols=295 Identities=16% Similarity=0.175 Sum_probs=240.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---EECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
Q ss_conf 78887988999999999999989999986403362---222564658999999999998737910799806765526899
Q gi|254781051|r 202 FSSNFSKEEQRDILDKLVRAEGFEKFIDIKYKGAK---RFGADGSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVL 278 (957)
Q Consensus 202 ~~~~~s~eeK~~iL~~L~~Ae~FE~FL~~Kf~g~K---RFsLEG~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL 278 (957)
..+.+|+|+-+.++++++.+-.||..+..-|..-| -.+.-|-|+.-.++- ....-++.++ -.||+.--.|
T Consensus 37 ~~~~ls~e~ll~~yr~M~~~R~~ee~~~~l~~qG~igf~~~~~GqEa~~vg~~------~aL~~~D~i~-~~yR~hg~~l 109 (368)
T 1w85_A 37 AMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLGFYAPTAGQEASQIASH------FALEKEDFIL-PGYRDVPQII 109 (368)
T ss_dssp GCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCCCTTCHHHHHHHH------HTCCTTCEEE-CCSSCHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH------HHCCCCCEEE-CCCCCHHHHH
T ss_conf 57999999999999999999999999999997789667528898799999999------8589758751-1345157663
Q ss_pred HHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 98853798999998558874322345551001502688983596189997178773100044553236777764166654
Q gi|254781051|r 279 SQIMNKLPRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVG 358 (957)
Q Consensus 279 ~Nvl~Kp~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~ 358 (957)
+- |-|+..+|.+..+...... ..|+ + .+.+.-|.+-+--|++.|.+-|.+.+..+
T Consensus 110 a~--G~~~~~~~~~~~~~~~~~~-~~~~-----------------~--~~~~~~~ivG~~~p~AvG~A~a~k~~~~~--- 164 (368)
T 1w85_A 110 WH--GLPLYQAFLFSRGHFHGNQ-IPEG-----------------V--NVLPPQIIIGAQYIQAAGVALGLKMRGKK--- 164 (368)
T ss_dssp HT--TCCHHHHHHHHHTCGGGGC-CCTT-----------------C--CBCCCCCSTTHHHHHHHHHHHHHHHTTCS---
T ss_pred HC--CCCHHHHHHHCCCCCCCCC-CCCC-----------------C--CCCCCCCCCCCCCHHHHHHHHHHHHCCCC---
T ss_conf 12--8999999973489987899-9988-----------------7--56886520032304677999998762799---
Q ss_pred CCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCC
Q ss_conf 45556544540478886257533346725887645106774436579998416020124701024677840011220340
Q gi|254781051|r 359 EKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIP 438 (957)
Q Consensus 359 ~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aP 438 (957)
-+.|...||+| +.||.++|+|||+.+...- .|.||-|||.+.+|...+..+.....+-|+.++.|
T Consensus 165 -----------~v~v~~~GDGa-~~eG~f~EalN~A~~~~LP---vlfv~enN~~aist~~~~~~~~~~~~~ra~~~Gi~ 229 (368)
T 1w85_A 165 -----------AVAITYTGDGG-TSQGDFYEGINFAGAFKAP---AIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIP 229 (368)
T ss_dssp -----------CCEEEEEETGG-GGSHHHHHHHHHHHHTTCC---EEEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCC
T ss_pred -----------CEEEEECCCCC-CCCCHHHHHHHHHHHCCCC---CEEEEEECCCCCCCCCHHHHCCCCCHHHHCCCCCC
T ss_conf -----------67999516987-4334699999999853898---54899888824457613430333200131126886
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC-CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC
Q ss_conf 58742678899999999999999973897399864211256564-35422355788888671899899999998644898
Q gi|254781051|r 439 IFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNE-GDEPSFTQPMMYKTIRSHKSVLQLYADSLMKNQVI 517 (957)
Q Consensus 439 I~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE-~DeP~fTQP~mY~~I~~hp~v~~~Y~~~Li~~g~i 517 (957)
.++|+|.|+++|..+++-|+++-.+-+..++|++.|||-.||-. .|||..-.+.-.-.-.+...+...+.++|+++|++
T Consensus 230 ~~~vDG~D~~av~~~~~~a~~~~R~g~gP~lie~~tyR~~gHs~~~dD~~~YR~~ee~~~~~~~DPi~~~~~~L~~~g~~ 309 (368)
T 1w85_A 230 GIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLW 309 (368)
T ss_dssp EEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECCCSSCSCSSCC------CHHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC
T ss_conf 37766888899999999999999848975799630546188879777841236758999988589699999999987999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 98999999999999977566654125
Q gi|254781051|r 518 SKQELQSLANNWHKYLEAEYKESESY 543 (957)
Q Consensus 518 t~~e~~~~~~~~~~~l~~~~~~~k~~ 543 (957)
|+++++++.++.++..+++++.+..-
T Consensus 310 ~e~e~~~i~~~~~~eV~~a~~~A~~~ 335 (368)
T 1w85_A 310 SEEEENNVIEQAKEEIKEAIKKADET 335 (368)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999999868
No 7
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=99.38 E-value=4.5e-11 Score=101.85 Aligned_cols=304 Identities=18% Similarity=0.232 Sum_probs=202.8
Q ss_pred CCCCHHHHHHHHHHHHHCCCEEEEECCCCCC--CCCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHH
Q ss_conf 6421147898889886358315785010022--33323027999778884455634427898459998243111101343
Q gi|254781051|r 603 GIDWSMAESLAFGSLCYEGYKVRLSGQDCER--GTFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGF 680 (957)
Q Consensus 603 ~iDW~~AE~LA~~SLl~eG~~VRlsGQD~~R--GTFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgF 680 (957)
..+|..|=..|..-++..--.|-+-|||+.. |.|. .|..- .....++ .++|.+++|.+.+||
T Consensus 50 ~~~~~~a~~~al~~~~~~d~~vv~~g~dv~~~~G~~~---------~t~gl---~~k~gp~----R~~d~gIaEq~~vg~ 113 (369)
T 1ik6_A 50 MANMAKAINMALHEEMERDERVVVLGEDVGKKGGVFL---------VTEGL---YERFGPE----RVIDTPLNEGGILGF 113 (369)
T ss_dssp EECHHHHHHHHHHHHHHHCTTEEEEEC---------C---------TTTTH---HHHHCTT----TEEECCSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHH---------HCHHH---HHHHCCC----CEEECCHHHHHHHHH
T ss_conf 6649999999999999669899999476676787323---------04558---9985886----067656228999999
Q ss_pred HHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH-----HHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf 2022113865311100002442454102256554202-----57623336813543688888887656440578875214
Q gi|254781051|r 681 EYGYSLNNLNALTIWEAQFGDFANGAQVILDQFITAG-----EQKWLCTSNLVCLLPHGYEGQGPEHSSARLERFLQMCA 755 (957)
Q Consensus 681 EyGys~~~p~~L~iWEAQFGDF~NgAQviiDqfiss~-----e~KW~~~sglvllLPHGyeGqGPEHSSaRlERfLQl~a 755 (957)
--|.++.- -..+++-||.||.--| +||.+... ....+....+|+-.|.|+.+.|+-|.|-..+-++.-
T Consensus 114 AaGlA~~G--~~Piv~~~~~~f~~ra---~dqi~~~~a~~~~~~~~~~~~~~v~~~~~g~~~~~gthhs~~d~a~~~~-- 186 (369)
T 1ik6_A 114 AMGMAMAG--LKPVAEIQFVDFIWLG---ADELLNHIAKLRYRSGGNYKAPLVVRTPVGSGTRGGLYHSNSPEAIFVH-- 186 (369)
T ss_dssp HHHHHHTT--CEEEEECCCC----CC---HHHHHHHHHHHHC------CCCCEEEEEECC-----------HHHHHHT--
T ss_pred HHHHHHCC--CEEEEEEECCHHHHHH---HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHC--
T ss_conf 99999689--9479999611024677---9999999999765407862145663237756789876143775889846--
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCHH--HHCCCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 37826972488999999999974353488689856602210801268878--9379986035157764334445444579
Q gi|254781051|r 756 ENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVVSSLS--DMTCGSVFQAVLSDDAEYHGKTSVKLKE 833 (957)
Q Consensus 756 ~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~--d~~~g~~F~~vi~d~~~~~~~~~~~~~~ 833 (957)
=.||.|+.|++|.+..++|+--+. ..+|.+++-||.|.|.+...-+-. .+.-|. . .|+ .+
T Consensus 187 iP~l~V~~Psd~~e~~~ll~~a~~--~~~P~~~~~~k~l~~~~~~~~~~~~~~~~~Gk-~-~i~--------------r~ 248 (369)
T 1ik6_A 187 TPGLVVVMPSTPYNAKGLLKAAIR--GDDPVVFLEPKILYRAPREEVPEGDYVVEIGK-A-RVA--------------RE 248 (369)
T ss_dssp CTTCEEECCCSHHHHHHHHHHHHH--SSSCEEEEEEGGGSSCCCEEEECSSCCCCTTC-C-EEE--------------EC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHH--CCCCEEEEECCCCCCCCCCCCCCCCCEECCCE-E-EEE--------------EE
T ss_conf 799789960999999999999987--58986896062012577777899881121887-8-999--------------82
Q ss_pred HHHCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 54576899868857899999999769986899984014868289999998537998399806785317845789976999
Q gi|254781051|r 834 DSHIRRVILCTGKVYYDLLDNRDMRNIADIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQNMGAWTFIEPYLEK 913 (957)
Q Consensus 834 ~~~v~rvi~csGKvyydL~~~r~~~~~~~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N~GaW~~v~~rl~~ 913 (957)
- -+-.|+|+|-..+.-+++-++.+. ++.+|.+-.|.||+.+.|.+.++++.. +|.+.|.....|-=+.|...+.+
T Consensus 249 G--~dvtIia~G~~v~~al~aa~~L~~-~~~VId~~~lkPlD~~~i~~~~~kt~~--iv~vEE~~~~GGlGs~I~~~l~e 323 (369)
T 1ik6_A 249 G--DDVTLVTYGAVVHKALEAAERVKA-SVEVVDLQTLNPLDFDTVLKSVSKTGR--LIIAHDSPKTGGLGAEVRALVAE 323 (369)
T ss_dssp C--SSEEEEECTTHHHHHHHHHHTSSS-CEEEEECCEEETTCHHHHHHHHHHHCC--EEEEEEEESTTSHHHHHHHHHHH
T ss_pred C--CCEEEEEECCHHHHHHHHHHHCCC-CCEEEEEEECCCCCHHHHHHHHHHCCE--EEEEECCCCCCCHHHHHHHHHHH
T ss_conf 8--988999825027889999987389-816998564488778999999962898--99998799667599999999998
Q ss_pred H-HHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9-87505677601897536646723386789999999999987
Q gi|254781051|r 914 V-LHSIGADYSRVRYVGRLPSASTAVGHMSRHLEQLSSFIEDA 955 (957)
Q Consensus 914 ~-l~~~~~~~~~~~y~gR~~~aspA~G~~~~H~~e~~~li~~a 955 (957)
- +..+ ..++.-+|-+-.+.|....-..+.-..++|++.+
T Consensus 324 ~~~~~l---~~pv~rig~~d~p~~~~~le~~y~l~~e~I~~~i 363 (369)
T 1ik6_A 324 KALDRL---TAPVIRLAGPDVPQSPIAADAAYAPTVERIIKAI 363 (369)
T ss_dssp HSGGGC---SSCCEEEEECCCC------------CHHHHHHHH
T ss_pred HCHHHC---CCCEEEECCCCCCCCCHHHHHHHCCCHHHHHHHH
T ss_conf 466536---9985997179808784759988396999999999
No 8
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, ketoacid dehydrogenase, branched-chain, multi- enzyme complex, acylation; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=98.90 E-value=5e-07 Score=71.19 Aligned_cols=304 Identities=18% Similarity=0.217 Sum_probs=190.5
Q ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCC-CCCCCEEEEEECCCCCEEEEH-HHCCCCCCEEEEEECCCCCCCHHH
Q ss_conf 564211478988898863583157850100223-332302799977888445563-442789845999824311110134
Q gi|254781051|r 602 KGIDWSMAESLAFGSLCYEGYKVRLSGQDCERG-TFSHRHAILCDQETGKRYFPL-GNISKDQGHCEVVNSFLSEQAVLG 679 (957)
Q Consensus 602 ~~iDW~~AE~LA~~SLl~eG~~VRlsGQD~~RG-TFshRHavl~dq~t~~~y~pL-~~l~~~q~~f~v~nS~LSE~avlg 679 (957)
+.+.+..|=.-|..-.+..--.|=+=|||+..| -|- .|. .| +...++ .++|.++||.+.+|
T Consensus 19 ~~~~~~~ai~~al~~~~~~d~~v~~~g~dv~~gg~f~---------~t~----gl~~kfgp~----R~~d~gIaEq~~vg 81 (342)
T 2bfd_B 19 QKMNLFQSVTSALDNSLAKDPTAVIFGEDVAFGGVFR---------CTV----GLRDKYGKD----RVFNTPLCEQGIVG 81 (342)
T ss_dssp EEECHHHHHHHHHHHHHHHCTTCEEEETTTTTTCTTS---------TTT----THHHHHCTT----TEEECCSCHHHHHH
T ss_pred EEEEHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC---------CCH----HHHHHHCCC----CEECCCCCHHHHHH
T ss_conf 4552999999999999956989899958756786100---------356----589885876----23046630898998
Q ss_pred HHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH-HHHHC---CCC--CCEEECCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 32022113865311100002442454102256554202-57623---336--8135436888888876564405788752
Q gi|254781051|r 680 FEYGYSLNNLNALTIWEAQFGDFANGAQVILDQFITAG-EQKWL---CTS--NLVCLLPHGYEGQGPEHSSARLERFLQM 753 (957)
Q Consensus 680 FEyGys~~~p~~L~iWEAQFGDF~NgAQviiDqfiss~-e~KW~---~~s--glvllLPHGyeGqGPEHSSaRlERfLQl 753 (957)
+--|.++.- -.++.|-||.||.- --+||.+... ..+|+ +.+ -++..-+-|+-|+||-|.|-..+-++-
T Consensus 82 ~a~GlA~~G--~~Pvv~~~~~~f~~---ra~dqi~~~~a~~~~~~~~~~~~~~v~~~~~~~~~~~G~tHhs~~d~a~~~- 155 (342)
T 2bfd_B 82 FGIGIAVTG--ATAIAEIQFADYIF---PAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFA- 155 (342)
T ss_dssp HHHHHHHTT--CCEEEECSSGGGCG---GGHHHHHTTGGGHHHHTTTSSCCTTEEEEEEESCCSSCGGGSSCCCHHHHH-
T ss_pred HHHHHHHCC--CEEEEEEEEHHHHH---HHHHHHHHCCCHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH-
T ss_conf 899998379--90479983135543---518887202030000458721132146405765678887546546799984-
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCHHHH--CCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 143782697248899999999997435348868985660221080126887893--799860351577643344454445
Q gi|254781051|r 754 CAENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVVSSLSDM--TCGSVFQAVLSDDAEYHGKTSVKL 831 (957)
Q Consensus 754 ~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~d~--~~g~~F~~vi~d~~~~~~~~~~~~ 831 (957)
.=.||.|+.|++|.....+|+. +.+ ...|.++.-||.+.+...-..+.++. ..|. -.++-+
T Consensus 156 -~iPgl~V~~Ps~~~d~~~ll~~-ai~-~~~P~~~~~~k~~~~~~~~~~~~~~~~~~~g~--~~i~~~------------ 218 (342)
T 2bfd_B 156 -HCPGIKVVIPRSPFQAKGLLLS-CIE-DKNPCIFFEPKILYRAAAEEVPIEPYNIPLSQ--AEVIQE------------ 218 (342)
T ss_dssp -TSTTCEEECCSSHHHHHHHHHH-HHH-SSSCEEEEEEGGGTTSCCEEEESSCCCCCSSC--CEEEEC------------
T ss_pred -CCCCCEEEECCCHHHHHHHHHH-HHH-HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE--EEEEEC------------
T ss_conf -7999689955887999999999-997-26996402463135677766788763345763--799721------------
Q ss_pred CCHHHCCEEEEECCHHHHHHHHHHHH---CCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
Q ss_conf 79545768998688578999999997---699868999840148682899999985379983998067853178457899
Q gi|254781051|r 832 KEDSHIRRVILCTGKVYYDLLDNRDM---RNIADIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQNMGAWTFIE 908 (957)
Q Consensus 832 ~~~~~v~rvi~csGKvyydL~~~r~~---~~~~~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N~GaW~~v~ 908 (957)
- -+-.|+|.|-..+..+++.+. ..--++-++-+-.|.||..+.|.+.++++.+ ++=+.|....-|-=+.|.
T Consensus 219 --G--~ditIia~G~~v~~al~aa~~l~~~~gi~~~Vidl~~l~PlD~~~i~~~v~kt~~--iivvEE~~~~gG~Gs~I~ 292 (342)
T 2bfd_B 219 --G--SDVTLVAWGTQVHVIREVASMAKEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGR--LLISHEAPLTGGFASEIS 292 (342)
T ss_dssp --C--SSEEEEECTTHHHHHHHHHHHHHHHHCCCEEEEECCEEESCCHHHHHHHHHHHSC--EEEEEEEESTTCHHHHHH
T ss_pred --C--CEEEEECCCHHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCCHHHHHHHHCCCCE--EEEEECCCCCCCHHHHHH
T ss_conf --7--5144322561799999999998875587740123032487889999998637886--999977997772999999
Q ss_pred HHHHHH-HHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 769999-87505677601897536646723386789999999999987
Q gi|254781051|r 909 PYLEKV-LHSIGADYSRVRYVGRLPSASTAVGHMSRHLEQLSSFIEDA 955 (957)
Q Consensus 909 ~rl~~~-l~~~~~~~~~~~y~gR~~~aspA~G~~~~H~~e~~~li~~a 955 (957)
..+.+- +..+ ..++..+|-+-...|.. .-....-..+.|++.+
T Consensus 293 ~~l~e~~f~~l---~~pv~ri~~~d~p~p~~-le~~~~p~~~~I~~~i 336 (342)
T 2bfd_B 293 STVQEECFLNL---EAPISRVCGYDTPFPHI-FEPFYIPDKWKCYDAL 336 (342)
T ss_dssp HHHHHHHGGGC---SSCCEEEEECSSCCCST-THHHHSCCHHHHHHHH
T ss_pred HHHHHHHHHHC---CCCCEEECCCCCCCCHH-HHHHHCCCHHHHHHHH
T ss_conf 99998347546---99818957898679878-9988696999999999
No 9
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=98.84 E-value=1.1e-06 Score=68.60 Aligned_cols=268 Identities=15% Similarity=0.115 Sum_probs=171.3
Q ss_pred CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHH
Q ss_conf 64211478988898863583157850100223332302799977888445563442789845999824311110134320
Q gi|254781051|r 603 GIDWSMAESLAFGSLCYEGYKVRLSGQDCERGTFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEY 682 (957)
Q Consensus 603 ~iDW~~AE~LA~~SLl~eG~~VRlsGQD~~RGTFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEy 682 (957)
...|.-+=.-+...+..+.-.+-..+.|...||.... +..-.+ ++| +|...+|.+..++--
T Consensus 318 ~~~~~~~~~~~l~~~~~~~~~i~~i~~dl~~~tg~~~---------------f~~~~p--~R~--i~~GIaE~~mv~~a~ 378 (621)
T 2o1s_A 318 LPSYSKIFGDWLCETAAKDNKLMAITPAMREGSGMVE---------------FSRKFP--DRY--FDVAIAEQHAVTFAA 378 (621)
T ss_dssp CCBHHHHHHHHHHHHHHHCTTEEEEESSCTTTTTCHH---------------HHHHCT--TTE--EECCSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH---------------HHHHCC--CCE--EEHHHHHHHHHHHHH
T ss_conf 8568999999999998519988998478778767379---------------998689--646--622067999999998
Q ss_pred CCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHH-HHHHHCCCCCCEEECCCCC-CC-CCCCCCCCCHHHHHHHCCCCCE
Q ss_conf 2211386531110000244245410225655420-2576233368135436888-88-8876564405788752143782
Q gi|254781051|r 683 GYSLNNLNALTIWEAQFGDFANGAQVILDQFITA-GEQKWLCTSNLVCLLPHGY-EG-QGPEHSSARLERFLQMCAENNM 759 (957)
Q Consensus 683 Gys~~~p~~L~iWEAQFGDF~NgAQviiDqfiss-~e~KW~~~sglvllLPHGy-eG-qGPEHSSaRlERfLQl~a~~N~ 759 (957)
|.++. ++.-+=+-|.+|. |-..||-+-. +-. ...+++...|+- -| -||-|-+-- -.--|.+=.||
T Consensus 379 GlA~~---G~~p~~~tf~~F~---~~a~~qi~~~~al~----~~pv~~v~~~~gi~G~dGpTHq~i~--dla~lr~iPnl 446 (621)
T 2o1s_A 379 GLAIG---GYKPIVAIYSTFL---QRAYDQVLHDVAIQ----KLPVLFAIDRAGIVGADGQTHQGAF--DLSYLRCIPEM 446 (621)
T ss_dssp HHHHT---TCEEEEEEETTGG---GGGHHHHHHTTTTT----TCCCEEEEESCBCCCTTCGGGCBCS--HHHHTTTSTTC
T ss_pred HHHHC---CCEEEEEEEHHHH---HHHHHHHHHHHHHC----CCCEEEEEECCEECCCCCCCCCCHH--HHHHHHCCCCC
T ss_conf 99858---9906999638999---98899999998854----9896999979810799998633167--99998258996
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCE
Q ss_conf 69724889999999999743534886898566022108012688789379986035157764334445444579545768
Q gi|254781051|r 760 YVANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVVSSLSDMTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRR 839 (957)
Q Consensus 760 ~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~r 839 (957)
.|+.|+++...-.+++.-+.. -..|.++..|+.-..... .++...+..|. .. |+.+ .+ +-
T Consensus 447 ~v~~P~d~~e~~~~~~~a~~~-~~~p~~ir~~r~~~~~~~-~~~~~~~~~g~-~~-v~~~--------------g~--dv 506 (621)
T 2o1s_A 447 VIMTPSDENECRQMLYTGYHY-NDGPSAVRYPRGNAVGVE-LTPLEKLPIGK-GI-VKRR--------------GE--KL 506 (621)
T ss_dssp EEECCSSHHHHHHHHHHHHHC-CSSCEEEECCSSBCCCCC-CCCCCCCCTTC-CE-EEEC--------------CS--SE
T ss_pred EEECCCCHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCCC-CCCCEECCCCC-EE-EEEC--------------CC--CE
T ss_conf 898079999999999999971-799818994356565434-34440026874-79-9844--------------99--88
Q ss_pred EEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH-HHHHHHHHHHHHC
Q ss_conf 998688578999999997699868999840148682899999985379983998067853178457-8997699998750
Q gi|254781051|r 840 VILCTGKVYYDLLDNRDMRNIADIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQNMGAWT-FIEPYLEKVLHSI 918 (957)
Q Consensus 840 vi~csGKvyydL~~~r~~~~~~~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N~GaW~-~v~~rl~~~l~~~ 918 (957)
+|+++|-....-+++.+..+ +.+|-+-.+-||+.+.|.+.+++|.. |+.=||.--.|++. .+. +.+...
T Consensus 507 ~iia~G~~v~~A~~aae~L~---~~vi~~~~ikPlD~~~i~~~~~~~~~---vvtvEe~~~~GG~Gs~i~----~~l~~~ 576 (621)
T 2o1s_A 507 AILNFGTLMPEAAKVAESLN---ATLVDMRFVKPLDEALILEMAASHEA---LVTVEENAIMGGAGSGVN----EVLMAH 576 (621)
T ss_dssp EEEEESTTHHHHHHHHHHHT---CEEEECCEEESCCHHHHHHHHHHCSE---EEEEEEEESTTSHHHHHH----HHHHHT
T ss_pred EEEEEHHHHHHHHHHHHCCC---CEEEEECCCCCCCHHHHHHHHHHCCE---EEEEECCCCCCCHHHHHH----HHHHHC
T ss_conf 99963489999999983689---75998083588899999999811896---999947986776899999----999967
Q ss_pred CCCCCEEEEEECCC
Q ss_conf 56776018975366
Q gi|254781051|r 919 GADYSRVRYVGRLP 932 (957)
Q Consensus 919 ~~~~~~~~y~gR~~ 932 (957)
+ ...++..+|-|.
T Consensus 577 ~-~~~~v~~iGi~d 589 (621)
T 2o1s_A 577 R-KPVPVLNIGLPD 589 (621)
T ss_dssp T-CCCCEEEEEECS
T ss_pred C-CCCCEEEEEECC
T ss_conf 9-998779998798
No 10
>2e6k_A Transketolase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.09A {Thermus thermophilus HB8}
Probab=98.74 E-value=3.4e-05 Score=57.34 Aligned_cols=464 Identities=14% Similarity=0.152 Sum_probs=225.3
Q ss_pred CCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECC
Q ss_conf 77310004455323677776416665445556544540478886257533346725887645106774436579998416
Q gi|254781051|r 332 PSHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINN 411 (957)
Q Consensus 332 PSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNN 411 (957)
--||=.-=+++.|.+.|+........ .........+|.+|+ ||+++. .|.++|.||+..- +...--|=|+=||
T Consensus 117 tG~lG~gls~A~G~A~a~~~~~~~~~--~~~~~~~~~~v~~vi--GDG~l~-eG~~~EAln~a~~--~~l~nLivi~n~N 189 (651)
T 2e6k_A 117 TGPLGQGISTAVGLALAERKLAAEFN--RPGHVVVDHYTYVLA--SDGDLM-EGVSGEAASLAGH--WGLSKLIVFWDDN 189 (651)
T ss_dssp CCSTTHHHHHHHHHHHHHHHHHHHHC--BTTBCCCCCCEEEEE--CHHHHH-SHHHHHHHHHHHH--TTCTTEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCCCEEEEE--CCCCCC-CCCHHHHHHHHHH--CCCCCEEEEEECC
T ss_conf 78758889999999999998404235--566555676389995--640025-5531899999975--7877789999078
Q ss_pred CEECCCCCHHCCCCCCCCHHHHHHCCC-EEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC-CC
Q ss_conf 020124701024677840011220340-5874267889999999999999997389739986421125656435422-35
Q gi|254781051|r 412 QIGFTTNPSSARSCTYASDISKSIGIP-IFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPS-FT 489 (957)
Q Consensus 412 QIGFTT~p~d~RSs~Y~TDiAK~i~aP-I~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~-fT 489 (957)
++--..+.....+..+ ..-.+...-- +..+++++.+....+.+.|. .-+|-++|-.....-+|......+. ..
T Consensus 190 ~~si~~~~~~~~~~~~-~~r~~~~g~~~~~~~~g~~~~~~~~a~~~a~----~~~kp~~i~~~t~~~~g~~~~~~~~~~~ 264 (651)
T 2e6k_A 190 RISIDGPTDLAFTEDV-LARYRAYGWQTLRVEDVNDLEALRKAIKLAK----LDERPTLIAVRSHIGFGSPKQDSAKAHG 264 (651)
T ss_dssp CEETTEEGGGTCCSCH-HHHHHHTTCEEEEESCTTCHHHHHHHHHHHH----HSSSCEEEEEECCTTTTSTTTTSGGGTS
T ss_pred CCCCCCCCCCCCCCHH-HHHHHHCCCEEEECCCCCHHHHHHHHHHHHH----HCCCCEEEEEEEEECCCCCCCCCCCCCC
T ss_conf 4344778676645117-7888752822441222120356789999998----6589768996100003665443433213
Q ss_pred CHHHHHHHHHCCCHHHHHHHHHHH---CCCCCHHHHHHHH-----HHHHHHHHHHHHHHHCCCCC-----------CCCC
Q ss_conf 578888867189989999999864---4898989999999-----99999977566654125876-----------5666
Q gi|254781051|r 490 QPMMYKTIRSHKSVLQLYADSLMK---NQVISKQELQSLA-----NNWHKYLEAEYKESESYCPE-----------KLGL 550 (957)
Q Consensus 490 QP~mY~~I~~hp~v~~~Y~~~Li~---~g~it~~e~~~~~-----~~~~~~l~~~~~~~k~~~~~-----------~~~~ 550 (957)
.|+....+.. +...+.. ...+..+..+... ..+....+......+...|. ....
T Consensus 265 ~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 337 (651)
T 2e6k_A 265 EPLGPEAVEA-------TRRNLGWPYPPFVVPEEVYRHMDMREKGRAWQEAWEKALEAYARAYPDLHQELMRRLRGELPP 337 (651)
T ss_dssp SCCHHHHHHH-------HHHHHTCCCCTTCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTTCCCC
T ss_pred CCCCHHHHHH-------HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
T ss_conf 6898178877-------777624788765465898754322101257999988888876520740112344321256741
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 65686266677899999999887436899862056778889989987334356421147898889886358315785010
Q gi|254781051|r 551 LHNGENERKNSVSKEILKKIGSSIIRLPKSFNTHKIVERLMANRQKMIETGKGIDWSMAESLAFGSLCYEGYKVRLSGQD 630 (957)
Q Consensus 551 ~~~~~~~~~T~v~~~~L~~i~~~l~~~Pe~f~~h~~v~k~~~~R~~~~~~~~~iDW~~AE~LA~~SLl~eG~~VRlsGQD 630 (957)
.........+.++. .+.+...+..+....+-=.+....++.++
T Consensus 338 ~~~~~~~~~~~~~t-----------------------r~~~~~~L~~l~~~~~~i~~~~~~~~~~~-------------- 380 (651)
T 2e6k_A 338 LPEEPPSFDKPIAT-----------------------RAASGRALNLLAPRLPELLGGSADLTPSN-------------- 380 (651)
T ss_dssp CCCSCCCCCSCBCH-----------------------HHHHHHHHHHHGGGCTTEEEEESSCHHHH--------------
T ss_pred CHHCCCCCCCCEEE-----------------------HHHHHHHHHHHHHHCCCEEEEECCCCCCC--------------
T ss_conf 00015433665020-----------------------78779999999854976799855646787--------------
Q ss_pred CCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHH
Q ss_conf 02233323027999778884455634427898459998243111101343202211386531110000244245410225
Q gi|254781051|r 631 CERGTFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGYSLNNLNALTIWEAQFGDFANGAQVIL 710 (957)
Q Consensus 631 ~~RGTFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~p~~L~iWEAQFGDF~NgAQvii 710 (957)
.... ++.. .....- .++ .++|...+|.+.++|--|.++.. .+..+.+.|..|. |-..
T Consensus 381 -----~~~~--------~~~~-~~~~~~--~p~--R~~dvGIaEq~avt~AaGlA~~G--~~~p~~~~f~~F~---~~~~ 437 (651)
T 2e6k_A 381 -----NTKA--------EGME-DFSRAN--PLG--RYLHFGVREHAMGAILNGLNLHG--GYRAYGGTFLVFS---DYMR 437 (651)
T ss_dssp -----TCSC--------TTCC-BCBTTB--TTC--CEEECCSCHHHHHHHHHHHHHHS--SCEEEEEEEGGGG---GGSH
T ss_pred -----CCCC--------CCCC-CCCCCC--CCC--CCEEECHHHHHHHHHHHHHHHCC--CCEEEEEEHHHHH---HHHH
T ss_conf -----6444--------5662-224123--356--72454367899999999999808--9807998619988---7568
Q ss_pred HHHHHHHHHHHCCCCCCEEECCCCC--CCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 6554202576233368135436888--88887656440578875214378269724889999999999743534886898
Q gi|254781051|r 711 DQFITAGEQKWLCTSNLVCLLPHGY--EGQGPEHSSARLERFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIM 788 (957)
Q Consensus 711 Dqfiss~e~KW~~~sglvllLPHGy--eGqGPEHSSaRlERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv 788 (957)
||.+-. -|....-+++...-|. -.-||-|-+-.--=+| ..-.||.|+.|+.+....++|+.-+.. ...|.++
T Consensus 438 dqi~~~---~~~~~~~v~~~~~~g~~~g~dG~tH~~~~d~~~~--r~iPn~~v~~P~d~~E~~~~l~~a~~~-~~~p~~i 511 (651)
T 2e6k_A 438 PAIRLA---ALMGVPTVFVFTHDSIALGEDGPTHQPVEHLMSL--RAMPNLFVIRPADAYETFYAWLVALRR-KEGPTAL 511 (651)
T ss_dssp HHHHHH---HHHTCCCEEEEECCSGGGCTTCTTTCCSSHHHHH--HTSTTCEEECCSSHHHHHHHHHHHHHC-CSSCEEE
T ss_pred HHHHHH---HHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHH--HCCCCCEEECCCCHHHHHHHHHHHHHH-CCCCEEE
T ss_conf 888776---5227733999722543356655455766678998--648996422899869999999999663-3897234
Q ss_pred ECCCHHHCCCCCCCCHHH--HCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHCCC--CCEE
Q ss_conf 566022108012688789--379986035157764334445444579545768998688578999999997699--8689
Q gi|254781051|r 789 MAPKSLLRHKRVVSSLSD--MTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRRVILCTGKVYYDLLDNRDMRNI--ADIY 864 (957)
Q Consensus 789 ~tPKsLLR~~~a~S~l~d--~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~rvi~csGKvyydL~~~r~~~~~--~~va 864 (957)
..|+.-. | .-+-++ ...+.. .++- +.+..+=+|+|+|-....-+++.+.... -++.
T Consensus 512 ~~~r~~~--~--~~~~~~~~~~~~g~--~~~~--------------~~~g~dv~iia~G~~v~~al~aa~~L~~~gi~~~ 571 (651)
T 2e6k_A 512 VLTRQAV--P--LLSPEKARGLLRGG--YVLE--------------DVEEPQGVLVATGSEVHLALRAQALLREKGVRVR 571 (651)
T ss_dssp ECCSSCB--C--CCCHHHHGGGGGSS--EEEE--------------CCSSCSEEEEECTTHHHHHHHHHHHHHHTTCCEE
T ss_pred EECCCCC--C--CCCCCCHHHCCCCE--EEEE--------------ECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 2046667--7--77843023313765--9999--------------7799998999881899999999999995499879
Q ss_pred EEEEECCCCCHH---HHHHHHHHHCCCCEEEEECCCCCCCCCH
Q ss_conf 998401486828---9999998537998399806785317845
Q gi|254781051|r 865 LLRIEQLYPFPE---DYLIKVLSRFVQAEIVWCQEEPQNMGAW 904 (957)
Q Consensus 865 ivRiEqLyPfP~---~~l~~~l~~y~~~e~vW~QEEp~N~GaW 904 (957)
+|-+=-+-||.. .-+..++.. ...+-+-|+..-.| |
T Consensus 572 Vi~~~~~kpld~~~~~~~~~vl~~---~~~~v~~E~~~~~g-~ 610 (651)
T 2e6k_A 572 VVSLPSFELFAAQPEAYRKEVLPP---GLPVVAVEAGASLG-W 610 (651)
T ss_dssp EEECSCHHHHHTSCHHHHHHHSCT---TSCEEEECSSCCTT-G
T ss_pred EEECCCCCHHHCCCHHHHHHHCCC---CCCEEEECCCHHHC-C
T ss_conf 995788733435739999986378---99289981881111-3
No 11
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=98.69 E-value=4.5e-06 Score=63.98 Aligned_cols=293 Identities=18% Similarity=0.286 Sum_probs=184.1
Q ss_pred HHHHHHCCCEEEEECCCCCC--CCCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCC
Q ss_conf 89886358315785010022--3332302799977888445563442789845999824311110134320221138653
Q gi|254781051|r 614 FGSLCYEGYKVRLSGQDCER--GTFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGYSLNNLNA 691 (957)
Q Consensus 614 ~~SLl~eG~~VRlsGQD~~R--GTFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~p~~ 691 (957)
.-.++.+.-.|=+-|+|+.. |.|.- ..+ -+....|+ + ++|.+.+|...+|+--|.|+.- -
T Consensus 14 l~e~~~~d~~vv~l~~Dl~~~~g~~~~--------~~~----~~~k~~pd--R--~i~~GIaEq~mvg~AaGlA~~G--~ 75 (324)
T 1umd_B 14 LDEEMAKDPRVVVLGEDVGKRGGVFLV--------TEG----LLQKYGPD--R--VMDTPLSEAAIVGAALGMAAHG--L 75 (324)
T ss_dssp HHHHHHHCTTEEEEETTCSTTCCTTST--------TTT----HHHHHCTT--T--EEECCSCHHHHHHHHHHHHHHT--C
T ss_pred HHHHHHHCCCEEEEECCCCCCCCCHHH--------HHH----HHHHHCCC--C--EEECCCCHHHHHHHHHHHHHCC--C
T ss_conf 999996595999996776767782032--------146----89985887--2--5435621899999999998367--8
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHH-HHHHC---CC-CCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 11100002442454102256554202-57623---33-681354368888888765644057887521437826972488
Q gi|254781051|r 692 LTIWEAQFGDFANGAQVILDQFITAG-EQKWL---CT-SNLVCLLPHGYEGQGPEHSSARLERFLQMCAENNMYVANCTS 766 (957)
Q Consensus 692 L~iWEAQFGDF~NgAQviiDqfiss~-e~KW~---~~-sglvllLPHGyeGqGPEHSSaRlERfLQl~a~~N~~V~~~tt 766 (957)
.++.+-+|.+|.--| +||.+... -.+|. +. .-+|.-.|.|+-+.||-|-|-.-.-. |..-.||.|+.|++
T Consensus 76 ~p~~~~~~~~f~~ra---~dqi~~~~a~~~~~~~g~~~~~~v~~~~~g~~~~G~thh~~~d~~~--~~~iP~l~i~~P~~ 150 (324)
T 1umd_B 76 RPVAEIQFADYIFPG---FDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAH--FVHTAGLKVVAVST 150 (324)
T ss_dssp EEEEECSSGGGCGGG---HHHHHHTTTTHHHHTTTSSCCCCEEEEEECSSSSCGGGSSCCCHHH--HHTSTTCEEEECCS
T ss_pred CCEEEEEHHHHHHHH---HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHH--HHHCCCCCEECCCC
T ss_conf 856998638776565---9999999998534307875787699957867678765455555999--95389972216899
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCHH--HHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEEEEC
Q ss_conf 999999999974353488689856602210801268878--937998603515776433444544457954576899868
Q gi|254781051|r 767 PANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVVSSLS--DMTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRRVILCT 844 (957)
Q Consensus 767 pAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~--d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~rvi~cs 844 (957)
|.+.-.++|... ...+|-++..||.+.|.....-+-+ .|..|. -.++.+ .-+-.|+|+
T Consensus 151 ~~d~~~~~~~a~--~~~~P~~ir~~~~~~~~~~~~~~~~~~~~~~Gk--~~i~~~----------------G~dv~Iia~ 210 (324)
T 1umd_B 151 PYDAKGLLKAAI--RDEDPVVFLEPKRLYRSVKEEVPEEDYTLPIGK--AALRRE----------------GKDLTLICY 210 (324)
T ss_dssp HHHHHHHHHHHH--HCSSCEEEEEEGGGSSSCCEECCSSCCCCCTTC--CEEEEC----------------CSSEEEEEC
T ss_pred HHHHHHHHHHHH--HCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCE--EEEEEC----------------CCCEEEEEE
T ss_conf 999999999998--626994672451014677767898771556886--999973----------------896379975
Q ss_pred CHHHHHHHHHHHHCCC--CCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCH-HHHHHHHHHHHHHCCCC
Q ss_conf 8578999999997699--86899984014868289999998537998399806785317845-78997699998750567
Q gi|254781051|r 845 GKVYYDLLDNRDMRNI--ADIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQNMGAW-TFIEPYLEKVLHSIGAD 921 (957)
Q Consensus 845 GKvyydL~~~r~~~~~--~~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N~GaW-~~v~~rl~~~l~~~~~~ 921 (957)
|-.-+.-+++.+.... -++.+|-+=.|.||+.+.|.+.++++.. +.+=||+...|+| +.+-..+.+-.... .+
T Consensus 211 G~~~~~al~aa~~L~~~gi~~~Vid~~~ikPlD~~~l~~~~~~~~~---vv~vEe~~~~GGlgs~i~~~i~e~~~~~-l~ 286 (324)
T 1umd_B 211 GTVMPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGR---VVLVSDAPRHASFVSEVAATIAEDLLDM-LL 286 (324)
T ss_dssp GGGHHHHHHHHHHHHHTTCCEEEEECCEEETCCHHHHHHHHHHHSC---EEEEEEEESTTCHHHHHHHHHHHHHGGG-CS
T ss_pred EHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCC---EEEEECCCCCCCHHHHHHHHHHHHHHHC-CC
T ss_conf 1548999999999996699779997236788868999999853492---8999838977869999999999976752-79
Q ss_pred CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 7601897536646723386789999999999987
Q gi|254781051|r 922 YSRVRYVGRLPSASTAVGHMSRHLEQLSSFIEDA 955 (957)
Q Consensus 922 ~~~~~y~gR~~~aspA~G~~~~H~~e~~~li~~a 955 (957)
...++ +|-+....|... .+.+.---+.|++.+
T Consensus 287 ~~~~r-i~~~d~~~p~~~-~~~y~l~~~~I~~~i 318 (324)
T 1umd_B 287 APPIR-VTGFDTPYPYAQ-DKLYLPTVTRILNAA 318 (324)
T ss_dssp SCCEE-EEECSSCCCSTT-HHHHSCCHHHHHHHH
T ss_pred CCCEE-ECCCCCCCCCCH-HHHHCCCHHHHHHHH
T ss_conf 98489-755987999754-988298999999999
No 12
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=98.68 E-value=5.4e-05 Score=55.84 Aligned_cols=468 Identities=15% Similarity=0.128 Sum_probs=237.7
Q ss_pred CCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCE
Q ss_conf 31000445532367777641666544555654454047888625753334672588764510677443657999841602
Q gi|254781051|r 334 HLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQI 413 (957)
Q Consensus 334 HLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQI 413 (957)
||=.-=+++.|.|.|+........ .........+|++|. ||++.. .|.++|.||+..-.. .+--|=|+=+|++
T Consensus 117 ~~G~gis~A~G~A~A~k~l~~~~~--~~~l~~~~~~vv~vi--GDG~l~-eG~a~EAln~Ag~~~--l~nLivIlndN~~ 189 (680)
T 1gpu_A 117 PLGQGISNAVGMAMAQANLAATYN--KPGFTLSDNYTYVFL--GDGCLQ-EGISSEASSLAGHLK--LGNLIAIYDDNKI 189 (680)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHC--BTTBCCCCCCEEEEE--CHHHHH-SHHHHHHHHHHHHTT--CTTEEEEEEECSE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCEEEEEE--CCCCCC-CHHHHHHHHHHHHHC--CCCEEEEECCCCC
T ss_conf 757889999999999999754306--667666786699994--676656-689999999988757--9988999858963
Q ss_pred ECCCCCHHCCCCCCCCHHHHHH---CCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 0124701024677840011220---3405874267889999999999999997389739986421125656435422355
Q gi|254781051|r 414 GFTTNPSSARSCTYASDISKSI---GIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPSFTQ 490 (957)
Q Consensus 414 GFTT~p~d~RSs~Y~TDiAK~i---~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~fTQ 490 (957)
.-.++. +.....|+.+.+ +--++-|.+.+......+..++...+.+ .|.++|-....+-+|+-..+.+..-
T Consensus 190 si~~~~----~~~~~~~~~~~~~~~Gw~v~~v~~~~~~~~~~~~~~~~~~~~~-~kp~~i~~~t~~g~G~~~~~~~~~~- 263 (680)
T 1gpu_A 190 TIDGAT----SISFDEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKLSK-DKPTLIKMTTTIGYGSLHAGSHSVH- 263 (680)
T ss_dssp ETTEEG----GGTCCCCHHHHHHHHTCEEEEESCTTTCHHHHHHHHHHHHHCT-TSCEEEEEECCTTTTSTTTTSGGGS-
T ss_pred EECCCC----CCCCCCCHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHC-CCCCEEEEEEECCCCCCCCCCCCCC-
T ss_conf 236754----4432357999999619708996032056899999999999834-8862133233112366322442111-
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHCC-------CCCHHHHHHHHHHHHHH-------HHHHHHH---------------HH
Q ss_conf 7888886718998999999986448-------98989999999999999-------7756665---------------41
Q gi|254781051|r 491 PMMYKTIRSHKSVLQLYADSLMKNQ-------VISKQELQSLANNWHKY-------LEAEYKE---------------SE 541 (957)
Q Consensus 491 P~mY~~I~~hp~v~~~Y~~~Li~~g-------~it~~e~~~~~~~~~~~-------l~~~~~~---------------~k 541 (957)
..+............-| .+..+..+......... ....... .+
T Consensus 264 --------~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (680)
T 1gpu_A 264 --------GAPLKADDVKQLKSKFGFNPDKSFVVPQEVYDHYQKTILKPGVEANNKWNKLFSEYQKKFPELGAELARRLS 335 (680)
T ss_dssp --------SSCCCHHHHHHHHHHTTCCTTCCSCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHT
T ss_pred --------CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
T ss_conf --------464201577789998488877673664478899987653110358999988777664207077899998742
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 25876566665686266677899-99999988743-68998620567788899899873343564211478988898863
Q gi|254781051|r 542 SYCPEKLGLLHNGENERKNSVSK-EILKKIGSSII-RLPKSFNTHKIVERLMANRQKMIETGKGIDWSMAESLAFGSLCY 619 (957)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~T~v~~-~~L~~i~~~l~-~~Pe~f~~h~~v~k~~~~R~~~~~~~~~iDW~~AE~LA~~SLl~ 619 (957)
...|................+.. .........+. .+|+ -.+....+.-.++..
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------------------------~~~~~~~~~~~~~~~ 390 (680)
T 1gpu_A 336 GQLPANWESKLPTYTAKDSAVATRKLSETVLEDVYNQLPE-------------------------LIGGSADLTPSNLTR 390 (680)
T ss_dssp TCCCTTGGGGSCCCCTTSCCBCHHHHHHHHHHHHTTTCTT-------------------------EEEEESSCHHHHTCS
T ss_pred CCCCCCHHCCCCCHHCCCCCCCHHHCCHHHHHHHHHHCHH-------------------------HHCCCCCCCCCCCHH
T ss_conf 7887301102431000134310011004578999885634-------------------------413552113432001
Q ss_pred CCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEHHHCCC-CCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCC
Q ss_conf 58315785010022333230279997788844556344278-98459998243111101343202211386531110000
Q gi|254781051|r 620 EGYKVRLSGQDCERGTFSHRHAILCDQETGKRYFPLGNISK-DQGHCEVVNSFLSEQAVLGFEYGYSLNNLNALTIWEAQ 698 (957)
Q Consensus 620 eG~~VRlsGQD~~RGTFshRHavl~dq~t~~~y~pL~~l~~-~q~~f~v~nS~LSE~avlgFEyGys~~~p~~L~iWEAQ 698 (957)
..|. ..+.++..... -.++ ++|.-..|.+..+|--|.++.-- .+.-+=+.
T Consensus 391 ------~~~~--------------------~~~~~~~~~~~~~pgr--~~d~GIaE~~~~~~a~GlA~~G~-~~~p~~~~ 441 (680)
T 1gpu_A 391 ------WKEA--------------------LDFQPPSSGSGNYSGR--YIRYGIREHAMGAIMNGISAFGA-NYKPYGGT 441 (680)
T ss_dssp ------CTTC--------------------CEECCTTTSSEETTCC--EEECCSCHHHHHHHHHHHHHHCT-TCEEEEEE
T ss_pred ------HCCC--------------------CCCCCCCCCCCCCCCC--EEEHHHHHHHHHHHHHCCCCCCC-CCEEEHHH
T ss_conf ------1145--------------------5566642001368975--01113667768988521100256-41020125
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCC--CCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 2442454102256554202576233368135436888--88887656440578875214378269724889999999999
Q gi|254781051|r 699 FGDFANGAQVILDQFITAGEQKWLCTSNLVCLLPHGY--EGQGPEHSSARLERFLQMCAENNMYVANCTSPANYFHILRR 776 (957)
Q Consensus 699 FGDF~NgAQviiDqfiss~e~KW~~~sglvllLPHGy--eGqGPEHSSaRlERfLQl~a~~N~~V~~~ttpAq~FH~LRR 776 (957)
|..|. |-..||.+..+ |.+..-++....-|. -..||-|.+..--=+| ..-.||.|..|+.+...-++|+.
T Consensus 442 ~~~f~---~~~~~~~~~~~---~~~~~~v~~~~~~g~~~g~dG~tH~~~~di~~~--r~iPn~~v~~P~d~~e~~~~l~~ 513 (680)
T 1gpu_A 442 FLNFV---SYAAGAVRLSA---LSGHPVIWVATHDSIGVGEDGPTHQPIETLAHF--RSLPNIQVWRPADGNEVSAAYKN 513 (680)
T ss_dssp EHHHH---GGGHHHHHHHH---HHTCCCEEEEECCSGGGCTTCTTTCCSSHHHHH--HTSSSCEEECCCSHHHHHHHHHH
T ss_pred HHHHH---HHHHHHHHHHH---HHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHH--CCCCCEEEECCCCHHHHHHHHHH
T ss_conf 57999---98889999861---105884353136654314898754441126552--25886268758999999999999
Q ss_pred HHCCCCCCCEEEECCCHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHH
Q ss_conf 74353488689856602210801268878937998603515776433444544457954576899868857899999999
Q gi|254781051|r 777 QIYDRSSRPLIMMAPKSLLRHKRVVSSLSDMTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRRVILCTGKVYYDLLDNRD 856 (957)
Q Consensus 777 Q~~r~~rkPLiv~tPKsLLR~~~a~S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~rvi~csGKvyydL~~~r~ 856 (957)
-+.+ ...|.++..||.-+.... ....+....|. . ++-+ .+.-+=.|+++|-....-+++.+
T Consensus 514 ~~~~-~~~p~~i~~~r~~~~~~~-~~~~~~~~~g~-~--~~~~--------------~~g~dv~iia~G~~v~~al~aa~ 574 (680)
T 1gpu_A 514 SLES-KHTPSIIALSRQNLPQLE-GSSIESASKGG-Y--VLQD--------------VANPDIILVATGSEVSLSVEAAK 574 (680)
T ss_dssp HHHC-SSCCEEEECCSSCBCCCT-TCCHHHHTTSC-E--EEEC--------------CSSCSEEEEECTHHHHHHHHHHH
T ss_pred HHHH-CCCCCEEECCCCCCCCCC-CCHHHHHCCCE-E--EEEE--------------CCCCCEEEEEEHHHHHHHHHHHH
T ss_conf 9875-289844525666778667-75054540671-8--9997--------------79998999964499999999999
Q ss_pred HCCC--CCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCC
Q ss_conf 7699--8689998401486828999999853799839980678531784
Q gi|254781051|r 857 MRNI--ADIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQNMGA 903 (957)
Q Consensus 857 ~~~~--~~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N~Ga 903 (957)
.... -++.+|-+=-+-||-.+.+...++-.++...+-+-|+-.-.|.
T Consensus 575 ~L~~~gi~~~Vi~~~~~kpld~~~~~~~~~~~~~~~~iv~vE~~~~~~~ 623 (680)
T 1gpu_A 575 TLAAKNIKARVVSLPDFFTFDKQPLEYRLSVLPDNVPIMSVEVLATTCW 623 (680)
T ss_dssp HHHTTTCCEEEEECSCHHHHHHSCHHHHHHHSCSSSCEEEECSSCSTTG
T ss_pred HHHHCCCCEEEEECCCCCHHHHCCHHHHHHHHCCCCEEEEEECCHHHCC
T ss_conf 9996699879996898636665759999997179986999934453115
No 13
>3l84_A Transketolase; TKT, structural genomics, center for structural genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=98.66 E-value=3.2e-05 Score=57.51 Aligned_cols=435 Identities=16% Similarity=0.152 Sum_probs=215.8
Q ss_pred CCHHCCHHHHHHHHHHHHHH--CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECC
Q ss_conf 31000445532367777641--6665445556544540478886257533346725887645106774436579998416
Q gi|254781051|r 334 HLEFVDPVVIGSVRARQDLK--AGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINN 411 (957)
Q Consensus 334 HLEaVnPVv~G~~RAkQd~~--~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNN 411 (957)
||=.-=+++.|.+.|..... .+.. ....+|.+|+ ||+++. .|.++|.||.....+-. --|=|+-||
T Consensus 115 ~lG~gls~A~G~A~a~k~~~~~~~~~-------~~~~~v~~vi--GDG~l~-eG~a~EAln~ag~~~l~--nlivi~D~N 182 (632)
T 3l84_A 115 PLGQGVANAVGFAMAAKKAQNLLGSD-------LIDHKIYCLC--GDGDLQ-EGISYEACSLAGLHKLD--NFILIYDSN 182 (632)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHCTT-------TCCCCEEEEE--EHHHHH-SHHHHHHHHHHHHTTCT--TEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCC-------CCCCEEEEEE--CCCCCC-CCCCHHHHHHHHHHCCC--CEEEEECCC
T ss_conf 64368999999999988875506986-------6786178995--664335-53348899888663367--579996044
Q ss_pred CEECCCCCHHCCCCCC-CCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC--CC
Q ss_conf 0201247010246778-40011220340587426788999999999999999738973998642112565643542--23
Q gi|254781051|r 412 QIGFTTNPSSARSCTY-ASDISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEP--SF 488 (957)
Q Consensus 412 QIGFTT~p~d~RSs~Y-~TDiAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP--~f 488 (957)
++--. +.-+-+..+ ....-+..+-.++-|||+|.+++..+.+-| .+..|-++|-.....-+|+-..+.+ ..
T Consensus 183 ~~s~~--~~~~~~~~~~~~~r~~~~g~~v~~vdG~~~~~~~~a~~~a----k~~~kp~~i~~~t~~~~G~~~~eg~~~~h 256 (632)
T 3l84_A 183 NISIE--GDVGLAFNENVKMRFEAQGFEVLSINGHDYEEINKALEQA----KKSTKPCLIIAKTTIAKGAGELEGSHKSH 256 (632)
T ss_dssp SEETT--EEGGGTCCCCHHHHHHHTTCEEEEEETTCHHHHHHHHHHH----HTCSSCEEEEEECCTTTTCGGGTTCGGGS
T ss_pred CCCCC--CCCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHHHHHHH----HHCCCCEEEECCCEEECCCHHHCCCCCCC
T ss_conf 22356--7743212347999999719769998897557779999988----74477415642532304827533883314
Q ss_pred CCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH-------HHHCCC-CCCCCCC--CCCCCCC
Q ss_conf 55788888671899899999998644898989999999999999775666-------541258-7656666--5686266
Q gi|254781051|r 489 TQPMMYKTIRSHKSVLQLYADSLMKNQVISKQELQSLANNWHKYLEAEYK-------ESESYC-PEKLGLL--HNGENER 558 (957)
Q Consensus 489 TQP~mY~~I~~hp~v~~~Y~~~Li~~g~it~~e~~~~~~~~~~~l~~~~~-------~~k~~~-~~~~~~~--~~~~~~~ 558 (957)
.-|...+.++ ...+.|...........+...+.+......... ....+. +...... .......
T Consensus 257 ~~~~~~~~~~-------~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (632)
T 3l84_A 257 GAPLGEEVIK-------KAKEQAGFDPNISFHIPQASKIRFESAVELGDLEEAKWKDKLEKSAKKELLERLLNPDFNKIA 329 (632)
T ss_dssp SSCCCHHHHH-------HHHHHHTCCTTCCSCCCHHHHHHHHTHHHHHHHHHHHHHHHHHHSSCHHHHHHHHSCCSTTCC
T ss_pred CCCCCCCHHH-------HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC
T ss_conf 4676541024-------469883886555613536788888889874015654455555555432023311474011101
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
Q ss_conf 67789999999988743689986205677888998998733435642114789888988635831578501002233323
Q gi|254781051|r 559 KNSVSKEILKKIGSSIIRLPKSFNTHKIVERLMANRQKMIETGKGIDWSMAESLAFGSLCYEGYKVRLSGQDCERGTFSH 638 (957)
Q Consensus 559 ~T~v~~~~L~~i~~~l~~~Pe~f~~h~~v~k~~~~R~~~~~~~~~iDW~~AE~LA~~SLl~eG~~VRlsGQD~~RGTFsh 638 (957)
.|. + .+..+....+-.-+..-|...--.+-....|...+|...
T Consensus 330 ------------------~~~-~------------------~~~~~a~r~~~g~~L~~l~~~~~~~~~~~~~~~~~~~~~ 372 (632)
T 3l84_A 330 ------------------YPD-F------------------KGKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTE 372 (632)
T ss_dssp ------------------CCC-C------------------TTCCBCHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCC
T ss_pred ------------------CCC-C------------------CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf ------------------544-3------------------577522799889999999875023201123446643221
Q ss_pred CEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 02799977888445563442789845999824311110134320221138653111000024424541022565542025
Q gi|254781051|r 639 RHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGYSLNNLNALTIWEAQFGDFANGAQVILDQFITAGE 718 (957)
Q Consensus 639 RHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~p~~L~iWEAQFGDF~NgAQviiDqfiss~e 718 (957)
.+. .....+ ++| +|-..+|.+..+|--|+++.. .+..+-+-|..|. |.+.||....+-
T Consensus 373 ~~~-------------~~~~~p--~R~--~d~GIaE~~~v~~aaGla~~~--~~~~~~~~~~~F~---~~~~~~~~~~~~ 430 (632)
T 3l84_A 373 LHS-------------MGDFVE--GKN--IHFGIREHAMAAINNAFARYG--IFLPFSATFFIFS---EYLKPAARIAAL 430 (632)
T ss_dssp CTT-------------SCBTTT--SSE--EECCSCHHHHHHHHHHHHHHS--SCEEEEEEEGGGH---HHHHHHHHHHHH
T ss_pred CCC-------------CCCCCC--CCC--EECCCHHHHHHHHHHHHHHCC--CCCEEECHHHHHH---HHHHHHHHHHHC
T ss_conf 111-------------355799--871--222600888999899998638--9735563589999---999999863401
Q ss_pred HHHCCCCCCEEECCCCC--CCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHC
Q ss_conf 76233368135436888--8888765644057887521437826972488999999999974353488689856602210
Q gi|254781051|r 719 QKWLCTSNLVCLLPHGY--EGQGPEHSSARLERFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLR 796 (957)
Q Consensus 719 ~KW~~~sglvllLPHGy--eGqGPEHSSaRlERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR 796 (957)
.++. .+++...-|. -+-||-|-+..-.=||. +=.||.|+.|+.+...-.+|+-=+ + ..+|-++..|+.-+.
T Consensus 431 ~~~~---~~~~~~~~g~~vg~dG~THq~~~di~~l~--~iPn~~v~~P~d~~e~~~~l~~al-~-~~~p~~i~~~r~~~~ 503 (632)
T 3l84_A 431 MKIK---HFFIFTHDSIGVGEDGPTHQPIEQLSTFR--AMPNFLTFRPADGVENVKAWQIAL-N-ADIPSAFVLSRQKLK 503 (632)
T ss_dssp HTCC---CEEEEECCSGGGCTTCGGGSCSSHHHHHH--HSSSCEEECCSSHHHHHHHHHHHH-H-CSSCEEEECCSSCBC
T ss_pred CCCC---CEEEEECCCCCCCCCCCCCCCCCHHHHHH--CCCCEEEECCCCHHHHHHHHHHHH-H-CCCCCCCCCCCCCCC
T ss_conf 3555---25999468755455554423201066662--588645545789899999998777-5-058863335678888
Q ss_pred CCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHCCC--CCEEEEEEECCCCC
Q ss_conf 8012688789379986035157764334445444579545768998688578999999997699--86899984014868
Q gi|254781051|r 797 HKRVVSSLSDMTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRRVILCTGKVYYDLLDNRDMRNI--ADIYLLRIEQLYPF 874 (957)
Q Consensus 797 ~~~a~S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~rvi~csGKvyydL~~~r~~~~~--~~vaivRiEqLyPf 874 (957)
.-. +. .+..++. ....+.+.+.-+=.|+++|-....-+++.+.... -++.+|-+=.+-||
T Consensus 504 ~~~---------~~-~~~~~~~--------g~~~l~~g~~~~v~iia~G~~v~~al~aa~~L~~~gi~~~Vi~~~~~kpl 565 (632)
T 3l84_A 504 ALN---------EP-VFGDVKN--------GAYLLKESKEAKFTLLASGSEVWLCLESANELEKQGFACNVVSMPCFELF 565 (632)
T ss_dssp CCC---------CC-SBCCGGG--------SSEEEECCTTCSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECSBHHHH
T ss_pred CCC---------CC-CHHHCCC--------CEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH
T ss_conf 778---------53-0121267--------31999988999999996669999999999999864999799967988277
Q ss_pred HHH
Q ss_conf 289
Q gi|254781051|r 875 PED 877 (957)
Q Consensus 875 P~~ 877 (957)
-.+
T Consensus 566 d~~ 568 (632)
T 3l84_A 566 EKQ 568 (632)
T ss_dssp HTS
T ss_pred HHC
T ss_conf 653
No 14
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=98.64 E-value=4.4e-06 Score=64.06 Aligned_cols=296 Identities=18% Similarity=0.207 Sum_probs=185.3
Q ss_pred HHHHHHHHHCCCEEEEECCCCCC--CCCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCC
Q ss_conf 98889886358315785010022--3332302799977888445563442789845999824311110134320221138
Q gi|254781051|r 611 SLAFGSLCYEGYKVRLSGQDCER--GTFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGYSLNN 688 (957)
Q Consensus 611 ~LA~~SLl~eG~~VRlsGQD~~R--GTFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~ 688 (957)
.-|+..++.+--.|=+=|||++. |.|. .|.. ..+...++ .++|...+|.+..|+--|.++.-
T Consensus 10 ~~al~~~~~~d~~v~~l~~D~~~~~g~~~---------~~~~---l~~~fgp~----R~~~~GIaEq~mvg~AaGlA~~G 73 (324)
T 1w85_B 10 TDALRIELKNDPNVLIFGEDVGVNGGVFR---------ATEG---LQAEFGED----RVFDTPLAESGIGGLAIGLALQG 73 (324)
T ss_dssp HHHHHHHHHHCTTEEEEETTCSTTCCTTS---------TTTT---HHHHHCTT----TEEECCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCCCHH---------HHHH---HHHHHCCC----CEEECCHHHHHHHHHHHHHHHCC
T ss_conf 99999999659899999557676678224---------2078---99985888----36645640788998999998479
Q ss_pred CCCCEEECCCCCCCCCCCHHHHHHHH-HHHHHHHCC----CCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEE
Q ss_conf 65311100002442454102256554-202576233----3681354368888888765644057887521437826972
Q gi|254781051|r 689 LNALTIWEAQFGDFANGAQVILDQFI-TAGEQKWLC----TSNLVCLLPHGYEGQGPEHSSARLERFLQMCAENNMYVAN 763 (957)
Q Consensus 689 p~~L~iWEAQFGDF~NgAQviiDqfi-ss~e~KW~~----~sglvllLPHGyeGqGPEHSSaRlERfLQl~a~~N~~V~~ 763 (957)
-.- +-+-+|.+|. +-.+||.. ..+..+|.. .-.+++.-+.|+.+.||.|.|-..+-++..- .||.|..
T Consensus 74 ~~p--iv~~~~~~f~---~r~~~qi~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~thh~~~d~a~~~~i--Pn~~V~~ 146 (324)
T 1w85_B 74 FRP--VPEIQFFGFV---YEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQ--PGLKVVI 146 (324)
T ss_dssp CEE--EEBCSSGGGG---GGTHHHHHTTGGGHHHHTTTSSCCCCEEEEEECSSSCCCTTSSCCCHHHHTTS--TTCEEEC
T ss_pred CCE--EEEEEEHHHH---HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHCC--CCCEEEE
T ss_conf 970--4899753478---88999999999987663067312124066356366788732324657787269--9818996
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCHHH--HCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEE
Q ss_conf 4889999999999743534886898566022108012688789--37998603515776433444544457954576899
Q gi|254781051|r 764 CTSPANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVVSSLSD--MTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRRVI 841 (957)
Q Consensus 764 ~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~d--~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~rvi 841 (957)
|++|...-.+|+.-+ ...+|.++.-++.+-|......+-.+ |.-|. . .|+-+ -+ +-.|
T Consensus 147 P~d~~e~~~~l~~a~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~Gk-~-~v~~~--------------G~--dv~I 206 (324)
T 1w85_B 147 PSTPYDAKGLLISAI--RDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGK-A-DIKRE--------------GK--DITI 206 (324)
T ss_dssp CSSHHHHHHHHHHHH--HSSSCEEEEEETTTSSSCCEECCSSCCCCCTTC-C-EEEEC--------------CS--SEEE
T ss_pred CCCHHHHHHHHHHHH--HCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCE-E-EEEEE--------------CC--CEEE
T ss_conf 799999999999998--606985302320003577766899872435987-8-99980--------------89--8899
Q ss_pred EECCHHHHHHHHHHHHCCC--CCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCH-HHHHHHHHHH-HHH
Q ss_conf 8688578999999997699--86899984014868289999998537998399806785317845-7899769999-875
Q gi|254781051|r 842 LCTGKVYYDLLDNRDMRNI--ADIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQNMGAW-TFIEPYLEKV-LHS 917 (957)
Q Consensus 842 ~csGKvyydL~~~r~~~~~--~~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N~GaW-~~v~~rl~~~-l~~ 917 (957)
+|+|-..+.-+++.++... -++.+|-+=.+.||+.+.+...+.++.+. .+=||+..-|+| +.+...+.+- +..
T Consensus 207 is~G~~v~~al~aa~~L~~~gi~~~vid~~~ikP~d~~~i~~~~~~~~~i---i~veE~~~~gG~gs~i~~~l~e~~~~~ 283 (324)
T 1w85_B 207 IAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRA---IVVQEAQRQAGIAANVVAEINERAILS 283 (324)
T ss_dssp EECTTHHHHHHHHHHHHHHTTCCEEEEECSEEESCCHHHHHHHHHHHSCE---EEEEEEETTSSSHHHHHHHHHHHHGGG
T ss_pred EECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCEE---EEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 97757999999999999966998899973778964156789999709879---999979976809999999999846011
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 05677601897536646723386789999999999987
Q gi|254781051|r 918 IGADYSRVRYVGRLPSASTAVGHMSRHLEQLSSFIEDA 955 (957)
Q Consensus 918 ~~~~~~~~~y~gR~~~aspA~G~~~~H~~e~~~li~~a 955 (957)
+ ..++.-+|-+....|....-+.....-+.|++.+
T Consensus 284 l---~~~v~~ig~~d~f~p~~~~e~~~~~~~~~I~~~i 318 (324)
T 1w85_B 284 L---EAPVLRVAAPDTVYPFAQAESVWLPNFKDVIETA 318 (324)
T ss_dssp C---SSCCEEEEECSSSSCCGGGHHHHSCCHHHHHHHH
T ss_pred C---CCCEEEECCCCCCCCCCCHHHHHCCCHHHHHHHH
T ss_conf 7---9996997349758999629988198999999999
No 15
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=98.57 E-value=4.1e-06 Score=64.31 Aligned_cols=290 Identities=11% Similarity=0.129 Sum_probs=180.5
Q ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCCCCC--CCCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHH
Q ss_conf 421147898889886358315785010022--333230279997788844556344278984599982431111013432
Q gi|254781051|r 604 IDWSMAESLAFGSLCYEGYKVRLSGQDCER--GTFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFE 681 (957)
Q Consensus 604 iDW~~AE~LA~~SLl~eG~~VRlsGQD~~R--GTFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFE 681 (957)
+...-|=..|.--++.+.-.|=+-|||+.. |.|.- |.. + .+...+ . .++|.+.+|...+|+-
T Consensus 15 ~t~r~a~~~al~~~~~~d~~vv~lg~Dv~~~gg~~~~---------t~~-l--~~k~~p--~--R~~d~gIaEq~~vg~A 78 (341)
T 2ozl_B 15 VTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKV---------SRG-L--WKKYGD--K--RIIDTPISEMGFAGIA 78 (341)
T ss_dssp EEHHHHHHHHHHHHHHHCTTEEEEETTSSTTCCTTST---------TTT-H--HHHHCT--T--TEEECCSCHHHHHHHH
T ss_pred EHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHH---------HHH-H--HHHHCC--C--CEEECCHHHHHHHHHH
T ss_conf 5399999999999996697999995643435780453---------245-8--998589--8--5664556278899999
Q ss_pred HCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH-HHHHCCC----CCCEEECCCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf 022113865311100002442454102256554202-5762333----68135436888888876564405788752143
Q gi|254781051|r 682 YGYSLNNLNALTIWEAQFGDFANGAQVILDQFITAG-EQKWLCT----SNLVCLLPHGYEGQGPEHSSARLERFLQMCAE 756 (957)
Q Consensus 682 yGys~~~p~~L~iWEAQFGDF~NgAQviiDqfiss~-e~KW~~~----sglvllLPHGyeGqGPEHSSaRlERfLQl~a~ 756 (957)
-|.|+.- -.++-+.+|.+|. |--+||.+... ...|... ..++.-.|-|+.+.|+-|.|--.+-++-.+
T Consensus 79 aGlA~~G--~~P~v~~~~~~f~---~ra~dQi~~~~a~~~~~~~~~~~~~~v~~~~~g~~~~g~thhs~~d~a~~~~i-- 151 (341)
T 2ozl_B 79 VGAAMAG--LRPICEFMTFNFS---MQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHC-- 151 (341)
T ss_dssp HHHHHTT--CEEEEECSSGGGG---GGGHHHHHTTTTTHHHHTTSSCCCCCEEEEECSCCSSCCGGGCCCCHHHHHTS--
T ss_pred HHHHHCC--CEEEEEEECCHHH---HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCC--
T ss_conf 9999589--9579997120577---99999999875576663167444553011256666875865313489999548--
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHH
Q ss_conf 78269724889999999999743534886898566022108012688789379986035157764334445444579545
Q gi|254781051|r 757 NNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVVSSLSDMTCGSVFQAVLSDDAEYHGKTSVKLKEDSH 836 (957)
Q Consensus 757 ~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~ 836 (957)
.||.|+.|++|.+...+|+-=+. ..+|.+++.+|.+.+-...... ...... |.-.+.... .-.+.
T Consensus 152 Pgl~V~~Ps~~~d~~~~l~~a~~--~~~p~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~gk~~----------~~~~G 216 (341)
T 2ozl_B 152 PGLKVVSPWNSEDAKGLIKSAIR--DNNPVVVLENELMYGVPFEFPP-EAQSKD--FLIPIGKAK----------IERQG 216 (341)
T ss_dssp TTCEEECCCSHHHHHHHHHHHHH--SSSCEEEEECHHHHTCEEECCH-HHHSTT--CCCCTTCCE----------EEECC
T ss_pred CCCEEEEECCHHHHHHHHHHHHH--CCCCCEEECCCCCCCCCCCCCC-CCCCCC--EEECCCCEE----------EEECC
T ss_conf 99789960899999999999996--4799457404223576554343-345662--453056368----------97148
Q ss_pred CCEEEEECCHHHHHHHHHHHHC--CCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 7689986885789999999976--99868999840148682899999985379983998067853178457899769999
Q gi|254781051|r 837 IRRVILCTGKVYYDLLDNRDMR--NIADIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQNMGAWTFIEPYLEKV 914 (957)
Q Consensus 837 v~rvi~csGKvyydL~~~r~~~--~~~~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N~GaW~~v~~rl~~~ 914 (957)
-.-.|+++|-.-+.-+++.+.. .--++.+|-+-.|.||+.+.|.+.++++.. +|=+.|-...-|-=+.|...+.+-
T Consensus 217 ~dvtiva~G~~v~~al~Aa~~L~~~gi~~~VIdl~~ikPlD~~~l~~~~~kt~~--vvtvEE~~~~GGlGs~Ia~~l~e~ 294 (341)
T 2ozl_B 217 THITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNH--LVTVEGGWPQFGVGAEICARIMEG 294 (341)
T ss_dssp SSEEEEECSTHHHHHHHHHHHHHTTTCCEEEEECCEEETCCHHHHHHHHHHHSC--EEEECSSCSTTCHHHHHHHHHHHS
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCE--EEEEECCCCCCCHHHHHHHHHHHC
T ss_conf 765886024589999999999997499848998326688999999999955797--999968986788899999999970
Q ss_pred --HHHCCCCCCEEEEEECCCCCCC
Q ss_conf --8750567760189753664672
Q gi|254781051|r 915 --LHSIGADYSRVRYVGRLPSAST 936 (957)
Q Consensus 915 --l~~~~~~~~~~~y~gR~~~asp 936 (957)
...+ ..++.-+|.|-...|
T Consensus 295 ~~~~~L---~~pv~rig~~d~~iP 315 (341)
T 2ozl_B 295 PAFNFL---DAPAVRVTGADVPMP 315 (341)
T ss_dssp TTGGGC---SSCCEEECCCSSCCC
T ss_pred CCHHHC---CCCCEEECCCCCCCC
T ss_conf 642234---998479676987898
No 16
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=98.56 E-value=1.1e-05 Score=61.01 Aligned_cols=309 Identities=16% Similarity=0.157 Sum_probs=192.6
Q ss_pred HHHHHHHCCCEEEEECCCCCC--CCCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCC
Q ss_conf 889886358315785010022--333230279997788844556344278984599982431111013432022113865
Q gi|254781051|r 613 AFGSLCYEGYKVRLSGQDCER--GTFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGYSLNNLN 690 (957)
Q Consensus 613 A~~SLl~eG~~VRlsGQD~~R--GTFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~p~ 690 (957)
|..-++...-.|=+-|||++. |.|.- +.. -.+...++ .++|.+.||...+|+--|.++.-
T Consensus 14 al~~~~~~d~~v~~~g~Dv~~~gg~~~~---------~~~---l~~kfgp~----R~~d~gIaEq~~vg~AaGlA~~G-- 75 (338)
T 1qs0_B 14 AMDVMLERDDNVVVYGQDVGYFGGVFRC---------TEG---LQTKYGKS----RVFDAPISESGIVGTAVGMGAYG-- 75 (338)
T ss_dssp HHHHHHHHCTTEEEEETTCSSSCCTTST---------TTT---HHHHHCTT----TEEECCSCHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCHHH---------HHH---HHHHHCCC----CEEECCHHHHHHHHHHHHHHHCC--
T ss_conf 9999995597999994666635782565---------178---99985887----26555520899999999999689--
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHH-HHHHHHCCC----CCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECC
Q ss_conf 3111000024424541022565542-025762333----68135436888888876564405788752143782697248
Q gi|254781051|r 691 ALTIWEAQFGDFANGAQVILDQFIT-AGEQKWLCT----SNLVCLLPHGYEGQGPEHSSARLERFLQMCAENNMYVANCT 765 (957)
Q Consensus 691 ~L~iWEAQFGDF~NgAQviiDqfis-s~e~KW~~~----sglvllLPHGyeGqGPEHSSaRlERfLQl~a~~N~~V~~~t 765 (957)
-.++-+-+|.+|. |--+||.+. .+-..|... ..++.-.|-|+-+-||-|.|-..+-++ +.-.||.|+.|+
T Consensus 76 ~~piv~~~~~ff~---~ra~dqi~~~~a~~~~~~~~~~~~~v~i~~~~~~~~~g~thh~~~d~a~~--~~iPnl~V~~P~ 150 (338)
T 1qs0_B 76 LRPVVEIQFADYF---YPASDQIVSEMARLRYRSAGEFIAPLTLRMPCGGGIYGGQTHSQSPEAMF--TQVCGLRTVMPS 150 (338)
T ss_dssp CEEEEECSCGGGC---GGGHHHHHTTTTTHHHHTTTSSCCCCEEEEEECCSSSCCSSSSCCCHHHH--TTSTTCEEECCC
T ss_pred CEEEEEEECHHHH---HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHH--HHCCCCEEEECC
T ss_conf 9059998337888---88999999999998752267421003442463257888753336769999--618997799459
Q ss_pred CHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCHHHHCC-CCCEEECCCCCCCCCCCCCCCC-CCHHHCCEEEEE
Q ss_conf 89999999999743534886898566022108012688789379-9860351577643344454445-795457689986
Q gi|254781051|r 766 SPANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVVSSLSDMTC-GSVFQAVLSDDAEYHGKTSVKL-KEDSHIRRVILC 843 (957)
Q Consensus 766 tpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~d~~~-g~~F~~vi~d~~~~~~~~~~~~-~~~~~v~rvi~c 843 (957)
+|...-.+|+.=+ ...+|.++..||.|.+.|.....-....+ .......++|......-++..+ .+-++ -.|+|
T Consensus 151 ~~~d~~~~l~~a~--~~~~p~~i~e~k~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~~iir~G~d--itii~ 226 (338)
T 1qs0_B 151 NPYDAKGLLIASI--ECDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGND--VSVLT 226 (338)
T ss_dssp SHHHHHHHHHHHH--HSSSCEEEEEEGGGSSSCCCSCSSSCCCCSTTSTTCEEESSCCCCCTTCCCEEECCSS--CEEEE
T ss_pred CHHHHHHHHHHHH--HCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC--CEEEE
T ss_conf 9999999999998--6149879995465448864333555556534577655687661023426999986687--50776
Q ss_pred CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 88578999999997699868999840148682899999985379983998067853178457899769999875056776
Q gi|254781051|r 844 TGKVYYDLLDNRDMRNIADIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQNMGAWTFIEPYLEKVLHSIGADYS 923 (957)
Q Consensus 844 sGKvyydL~~~r~~~~~~~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N~GaW~~v~~rl~~~l~~~~~~~~ 923 (957)
.|-..+...+..++.++ ++.++-+=.|.||..+.|.+.++++.+ ++=+.|....-|-=+.|...+.+-... .-..
T Consensus 227 ~G~~~~~a~~~~~~~gi-~~~VIdl~~lkPlD~~~l~~~~~k~~~--vv~vEE~~~~gG~gs~i~~~l~e~~~~--~l~~ 301 (338)
T 1qs0_B 227 YGTTVYVAQVAAEESGV-DAEVIDLRSLWPLDLDTIVESVKKTGR--CVVVHEATRTCGFGAELVSLVQEHCFH--HLEA 301 (338)
T ss_dssp CTTHHHHHHHHHHHHCC-CCEEEECSEEESCCHHHHHHHHHHHSC--EEEEESSCSTTSTHHHHHHHHHHHSSS--SCCS
T ss_pred HHHHHHHHHHHHHHHCC-CEEEEEECCCCCCCHHHHHHHHCCCCE--EEEEECCCCCCCHHHHHHHHHHHHHHH--HCCC
T ss_conf 78789999999997199-807998157886423789898716886--999977987788899999999984565--3799
Q ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 0189753664672338678999999999998
Q gi|254781051|r 924 RVRYVGRLPSASTAVGHMSRHLEQLSSFIED 954 (957)
Q Consensus 924 ~~~y~gR~~~aspA~G~~~~H~~e~~~li~~ 954 (957)
+++-+|-+-++.|.. .-..+.-.-+.|++.
T Consensus 302 ~~~ri~~~d~p~p~~-~e~~~~~~~~~I~~~ 331 (338)
T 1qs0_B 302 PIERVTGWDTPYPHA-QEWAYFPGPSRVGAA 331 (338)
T ss_dssp CCEEEECCSSCCCST-THHHHSCCHHHHHHH
T ss_pred CCEEECCCCCCCCCC-HHHHHCCCHHHHHHH
T ss_conf 848967897789983-288859899999999
No 17
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=98.56 E-value=2.1e-05 Score=58.89 Aligned_cols=265 Identities=15% Similarity=0.172 Sum_probs=165.4
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCC
Q ss_conf 21147898889886358315785010022333230279997788844556344278984599982431111013432022
Q gi|254781051|r 605 DWSMAESLAFGSLCYEGYKVRLSGQDCERGTFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGY 684 (957)
Q Consensus 605 DW~~AE~LA~~SLl~eG~~VRlsGQD~~RGTFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGy 684 (957)
.|..|-.-+...+...--.|=..+.|..-+|-.. .+..- .+++| +|...+|.+..|+--|.
T Consensus 323 s~~~a~g~~l~~~a~~~p~iv~~saDl~~stgl~---------------~f~~~--~p~r~--i~~GI~E~~mv~~a~Gl 383 (629)
T 2o1x_A 323 SWSAAFGEAVTEWAKTDPRTFVVTPAMREGSGLV---------------EFSRV--HPHRY--LDVGIAEEVAVTTAAGM 383 (629)
T ss_dssp BHHHHHHHHHHHHHHHCTTEEEEESSCTTTTTCH---------------HHHHH--CGGGE--EECCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCH---------------HHHHH--HCCCE--EECCHHHHHHHHHHHHH
T ss_conf 7999999999999841864476324557899854---------------77775--04355--65055678999998788
Q ss_pred CCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH-HHHHCCCCCCEEECCCC-C-CCCCCCCCCCCHHHHHHHCCCCCEEE
Q ss_conf 113865311100002442454102256554202-57623336813543688-8-88887656440578875214378269
Q gi|254781051|r 685 SLNNLNALTIWEAQFGDFANGAQVILDQFITAG-EQKWLCTSNLVCLLPHG-Y-EGQGPEHSSARLERFLQMCAENNMYV 761 (957)
Q Consensus 685 s~~~p~~L~iWEAQFGDF~NgAQviiDqfiss~-e~KW~~~sglvllLPHG-y-eGqGPEHSSaRlERfLQl~a~~N~~V 761 (957)
++. ++.-+-+-|.+|. |-..||.+-++ -.++ .+++...|. + -..||-|.+---. --|.+=.||.|
T Consensus 384 A~~---G~~p~~~tf~~F~---~~a~~qi~~~a~~~~~----~v~~v~~~~g~vGedGpTHq~iedl--a~lr~iPnl~V 451 (629)
T 2o1x_A 384 ALQ---GMRPVVAIYSTFL---QRAYDQVLHDVAIEHL----NVTFCIDRAGIVGADGATHNGVFDL--SFLRSIPGVRI 451 (629)
T ss_dssp HHT---TCEEEEEEEHHHH---GGGHHHHHHTTTTTTC----CCEEEEESBBCCCTTCTTTCBCSHH--HHTTTSTTCEE
T ss_pred HHC---CCEEEEEEEHHHH---HHHHHHHHHHHHHHCC----CEEEEEECCCCCCCCCCCCCCHHHH--HHHHHCCCEEE
T ss_conf 747---9828999618999---9899999998787369----8699997986568987766656789--99960899089
Q ss_pred EECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEE
Q ss_conf 72488999999999974353488689856602210801268878937998603515776433444544457954576899
Q gi|254781051|r 762 ANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVVSSLSDMTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRRVI 841 (957)
Q Consensus 762 ~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~rvi 841 (957)
+.|+++.....+|+. + -....|.++.-|+..+..-.. ....++..|. . .|+.+ .+ +-+|
T Consensus 452 ~~P~d~~e~~~~~~~-~-~~~~~P~~i~~~r~~~~~~~~-~~~~~~~~g~-~-~~~~~--------------g~--dv~I 510 (629)
T 2o1x_A 452 GLPKDAAELRGMLKY-A-QTHDGPFAIRYPRGNTAQVPA-GTWPDLKWGE-W-ERLKG--------------GD--DVVI 510 (629)
T ss_dssp ECCSSHHHHHHHHHH-H-HHSSSCEEEECCSSBCCCCCT-TCCCCCCTTC-C-EEEEC--------------CS--SEEE
T ss_pred EECCCHHHHHHHHHH-H-HCCCCCCEEEECCCCCCCCCC-CCCCCCCCCC-E-EEEEC--------------CC--CEEE
T ss_conf 831888999999998-6-405898558851476455554-4321013562-7-99507--------------99--8999
Q ss_pred EECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH-HHHHHHHHHHHHCCC
Q ss_conf 8688578999999997699868999840148682899999985379983998067853178457-899769999875056
Q gi|254781051|r 842 LCTGKVYYDLLDNRDMRNIADIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQNMGAWT-FIEPYLEKVLHSIGA 920 (957)
Q Consensus 842 ~csGKvyydL~~~r~~~~~~~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N~GaW~-~v~~rl~~~l~~~~~ 920 (957)
+|+|.....-+++.++. .++-+|-+--+-||+++.+.+.+++|. .|++=||.--.|.|. .+... +...+.
T Consensus 511 ia~G~~v~~Al~Aa~~L--~~~gVi~~~~ikPlD~e~l~~~~~~~~---~ivtvEe~~~~GGlGs~i~~~----l~~~~~ 581 (629)
T 2o1x_A 511 LAGGKALDYALKAAEDL--PGVGVVNARFVKPLDEEMLREVGGRAR---ALITVEDNTVVGGFGGAVLEA----LNSMNL 581 (629)
T ss_dssp EECHHHHHHHHHHHTTC--TTEEEEECCEEESCCHHHHHHHHHHCS---EEEEEEEEESSSSHHHHHHHH----HHHTTC
T ss_pred EECCHHHHHHHHHHHHC--CCCCEEECCCCCCCCHHHHHHHHHHCC---EEEEEECCCCCCCHHHHHHHH----HHHCCC
T ss_conf 94629999999999861--799779637058899999999984289---699995898678789999999----997198
Q ss_pred CCCEEEEEECC
Q ss_conf 77601897536
Q gi|254781051|r 921 DYSRVRYVGRL 931 (957)
Q Consensus 921 ~~~~~~y~gR~ 931 (957)
..++..+|=+
T Consensus 582 -~~~v~~iGi~ 591 (629)
T 2o1x_A 582 -HPTVRVLGIP 591 (629)
T ss_dssp -CCEEEEEEEC
T ss_pred -CCCEEEEEEC
T ss_conf -9868999868
No 18
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=98.28 E-value=2.4e-05 Score=58.44 Aligned_cols=474 Identities=14% Similarity=0.161 Sum_probs=224.5
Q ss_pred CCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCC
Q ss_conf 73100044553236777764166654455565445404788862575333467258876451067744365799984160
Q gi|254781051|r 333 SHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQ 412 (957)
Q Consensus 333 SHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQ 412 (957)
-||=.-=+++.|.+.|+........ . ........+|.+|+ ||++.. .|.++|.||+..-.+ ..=-|=|+-||+
T Consensus 140 G~lG~gls~A~G~A~A~~~~~~~~~-~-~~~~~~~~~v~avi--GDG~l~-eG~~~EAln~Ag~~~--L~nlivI~d~N~ 212 (690)
T 3m49_A 140 GPLGQGIATAVGMAMAERHLAAKYN-R-DAYNIVDHYTYAIC--GDGDLM-EGVSAEASSLAAHLQ--LGRLVVLYDSND 212 (690)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHHHHC-B-TTBCCSCCCEEEEE--CHHHHH-SHHHHHHHHHHHHTT--CTTEEEEEEECS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCC-C-CCCCCCCCEEEEEC--CCCCCC-CHHHHHHHHHHHHHC--CCCEEEEEECCC
T ss_conf 7626789999999999999730138-6-54466574599965--865525-187899999999828--897999971465
Q ss_pred EECCCCCHHCCCCCCCCHHHHHHCCCEEEE-CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC-CCCCCCCC
Q ss_conf 201247010246778400112203405874-2678899999999999999973897399864211256564-35422355
Q gi|254781051|r 413 IGFTTNPSSARSCTYASDISKSIGIPIFHV-NGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNE-GDEPSFTQ 490 (957)
Q Consensus 413 IGFTT~p~d~RSs~Y~TDiAK~i~aPI~HV-N~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE-~DeP~fTQ 490 (957)
+.-..+..+.. +.--.+..+..+-.++-| +|+|.++...+.+-| +..-++.++|-.-.-.-+|.-. .+.+..
T Consensus 213 ~si~~~v~~~~-~~~~~~~~~~~gw~v~~v~~g~~~~~~~~~~~~~---~~~~~~P~~i~~~T~~G~G~~~~e~~~~~-- 286 (690)
T 3m49_A 213 ISLDGDLNRSF-SESVEDRYKAYGWQVIRVEDGNDIEAIAKAIEEA---KADEKRPTLIEVRTTIGFGSPNKSGKSAS-- 286 (690)
T ss_dssp BCSSSBGGGTC-CCCHHHHHHHHTCEEEEESCTTCHHHHHHHHHHH---HHCCSSCEEEEEECCTTTTCTTTTTSGGG--
T ss_pred CCCCCCCCCCC-CCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH---HHCCCCCCCCEEECEECCCCHHHCCCCCC--
T ss_conf 44432321232-1029999985486369996487088879999999---86249986202202451587776488411--
Q ss_pred HHHHHHHHHCCCHHHHHH---HHHHHCCC----CCHHHHHHHHHHHH---HHHHHHHH----HHHCCCCCCCCCCCCCCC
Q ss_conf 788888671899899999---99864489----89899999999999---99775666----541258765666656862
Q gi|254781051|r 491 PMMYKTIRSHKSVLQLYA---DSLMKNQV----ISKQELQSLANNWH---KYLEAEYK----ESESYCPEKLGLLHNGEN 556 (957)
Q Consensus 491 P~mY~~I~~hp~v~~~Y~---~~Li~~g~----it~~e~~~~~~~~~---~~l~~~~~----~~k~~~~~~~~~~~~~~~ 556 (957)
...|.....+. +.|.-.+. ...+-.+.+.+... ..++.... ..+...|....
T Consensus 287 -------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~------- 352 (690)
T 3m49_A 287 -------HGSPLGVEETKLTKEAYAWTAEQDFHVAEEVYENFRKTVQDVGETAQAEWNTMLGEYAQAYPELAN------- 352 (690)
T ss_dssp -------TSSCCCHHHHHHHHHHTTCCCCSTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHSHHHHH-------
T ss_pred -------CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH-------
T ss_conf -------567766404678998727875678778799999999998860167788999887764202730367-------
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCC-------CHHH--HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 666778999999998874368998620-------5677--8889989987334356421147898889886358315785
Q gi|254781051|r 557 ERKNSVSKEILKKIGSSIIRLPKSFNT-------HKIV--ERLMANRQKMIETGKGIDWSMAESLAFGSLCYEGYKVRLS 627 (957)
Q Consensus 557 ~~~T~v~~~~L~~i~~~l~~~Pe~f~~-------h~~v--~k~~~~R~~~~~~~~~iDW~~AE~LA~~SLl~eG~~VRls 627 (957)
... ...-..+|+.... ..+. .+...+-...+.....--.+....+..++.+..
T Consensus 353 ---------~~~--~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~g~~l~~l~~~~~~~~~~~~~~~~~~~~~~------- 414 (690)
T 3m49_A 353 ---------ELQ--AAMNGLLPEGWEQNLPTYELGSKAATRNSSGAVINAIAESVPSFFGGSADLAGSNKTYM------- 414 (690)
T ss_dssp ---------HHH--HHHTTCCCTTGGGGCCCCCTTCEEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCC-------
T ss_pred ---------HHH--HHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC-------
T ss_conf ---------889--98607686012212643234775103455789999986237420310233366776654-------
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCH
Q ss_conf 01002233323027999778884455634427898459998243111101343202211386531110000244245410
Q gi|254781051|r 628 GQDCERGTFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGYSLNNLNALTIWEAQFGDFANGAQ 707 (957)
Q Consensus 628 GQD~~RGTFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~p~~L~iWEAQFGDF~NgAQ 707 (957)
..-+.|+. . .-+++| ++....|.+..++--|.++.- .+..+.+.|..|. |
T Consensus 415 ---~~~~~~~~------------------~--~~pgr~--~d~GIaE~~~v~~a~GlA~~G--~~~p~~~~y~~F~---~ 464 (690)
T 3m49_A 415 ---NNEKDFTR------------------D--DYSGKN--IWYGVREFAMGAAMNGIALHG--GLKTYGGTFFVFS---D 464 (690)
T ss_dssp ---TTSCBCBT------------------T--BTTCCE--EECCSCHHHHHHHHHHHHHHS--SCEEEEEEEGGGG---G
T ss_pred ---CCCCCCCC------------------C--CCCCCC--CCCCHHHHHHHHHHHHHHHCC--CCCEEEEEHHHHH---H
T ss_conf ---45645476------------------6--889660--243388999999999999718--9831577579999---9
Q ss_pred HHHHHHHHHHHHHHCCCCCCEEECCCCC--CCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 2256554202576233368135436888--88887656440578875214378269724889999999999743534886
Q gi|254781051|r 708 VILDQFITAGEQKWLCTSNLVCLLPHGY--EGQGPEHSSARLERFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRP 785 (957)
Q Consensus 708 viiDqfiss~e~KW~~~sglvllLPHGy--eGqGPEHSSaRlERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkP 785 (957)
-..||..-.+ +++...+++...-|. -.-||-|.+..-.=+|. +=.||.|+.|+++...-++||.-+ .....|
T Consensus 465 ~~~dqi~~~a---~~~~~~~~~~~~~g~~~g~dG~TH~~~~d~~~lr--~iPn~~v~~P~d~~e~~~~l~~a~-~~~~~p 538 (690)
T 3m49_A 465 YLRPAIRLAA---LMQLPVTYVFTHDSIAVGEDGPTHEPIEQLAALR--AMPNVSVIRPADGNESVAAWRLAL-ESTNKP 538 (690)
T ss_dssp GGHHHHHHHH---HHTCCCEEEEECCSGGGCTTCGGGCCSSHHHHHH--TSTTCEEECCSSHHHHHHHHHHHH-HCSSSC
T ss_pred HHHHHHHHHH---HCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH--CCCCCEEECCCCHHHHHHHHHHHH-HCCCCC
T ss_conf 8889999864---2023430343214544456742237555689986--388725876787999999999888-526898
Q ss_pred EEEECCCHHHCCCCC--CCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHCCC--C
Q ss_conf 898566022108012--688789379986035157764334445444579545768998688578999999997699--8
Q gi|254781051|r 786 LIMMAPKSLLRHKRV--VSSLSDMTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRRVILCTGKVYYDLLDNRDMRNI--A 861 (957)
Q Consensus 786 Liv~tPKsLLR~~~a--~S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~rvi~csGKvyydL~~~r~~~~~--~ 861 (957)
..+..|+.-+-.... -.+.+++..|. . ++.+. ..+.-+=.|+++|-..+.-+++.+.... -
T Consensus 539 ~~i~~~r~~~~~~~~~~~~~~~~i~kG~-y--~~~~~------------~~~g~dv~iia~G~~v~~al~aa~~L~~~gi 603 (690)
T 3m49_A 539 TALVLTRQDLPTLEGAKDDTYEKVAKGA-Y--VVSAS------------KKETADVILLATGSEVSLAVEAQKALAVDGV 603 (690)
T ss_dssp EEEECCSSEEECCHHHHTTHHHHHHTSC-E--EEECC------------SSSSCSEEEEECTTHHHHHHHHHHHHHHTTC
T ss_pred CHHHCCCCCCCCCCCCCCCCHHHHCCEE-E--EEEEC------------CCCCCCEEEEEEHHHHHHHHHHHHHHHHCCC
T ss_conf 4221156787876776632266626705-9--99624------------7899988999883999999999999996399
Q ss_pred CEEEEEEECCCCCHHHHHHHHHHHCCC-CEEEEECCCCCCCC
Q ss_conf 689998401486828999999853799-83998067853178
Q gi|254781051|r 862 DIYLLRIEQLYPFPEDYLIKVLSRFVQ-AEIVWCQEEPQNMG 902 (957)
Q Consensus 862 ~vaivRiEqLyPfP~~~l~~~l~~y~~-~e~vW~QEEp~N~G 902 (957)
++.+|-+=-+-||..+.+...-...+. ...+-+-|+---.|
T Consensus 604 ~~~Vi~~~s~kplD~~~~~~~~~~l~~~~~~~~~iE~g~~~g 645 (690)
T 3m49_A 604 DASVVSMPSMDRFEAQTAEYKESVLPKAVTKRFAIEMGATFG 645 (690)
T ss_dssp CEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEECSSCCTT
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHH
T ss_conf 879996688747876039999852566667089991766879
No 19
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=98.21 E-value=0.00066 Score=47.60 Aligned_cols=211 Identities=14% Similarity=0.114 Sum_probs=127.1
Q ss_pred EECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCC--CCCCCCCCCC
Q ss_conf 82431111013432022113865311100002442454102256554202576233368135436888--8888765644
Q gi|254781051|r 668 VNSFLSEQAVLGFEYGYSLNNLNALTIWEAQFGDFANGAQVILDQFITAGEQKWLCTSNLVCLLPHGY--EGQGPEHSSA 745 (957)
Q Consensus 668 ~nS~LSE~avlgFEyGys~~~p~~L~iWEAQFGDF~NgAQviiDqfiss~e~KW~~~sglvllLPHGy--eGqGPEHSSa 745 (957)
++....|....+|--|+++.......+| +-|.-| .|-.+||.+. .-|++..-++....-|. -+-||-|-+.
T Consensus 417 ~d~GIaE~~a~~~aaG~aLa~~G~~P~~-~~ystF---lqr~~dqi~~---~~~~~~~~v~~~~~~~~~~g~dG~tHq~~ 489 (675)
T 1itz_A 417 VRFGVREHGMGAICNGIALHSPGFVPYC-ATFFVF---TDYMRGAMRI---SALSEAGVIYVMTHDSIGLGEDGPTHQPI 489 (675)
T ss_dssp CCCCSCHHHHHHHHHHHHTTCTTCEEEE-EEEGGG---HHHHHHHHHH---HHHHTCCCEEEEECCSGGGCTTCTTTCCS
T ss_pred HHHCCHHHHHHHHHHHHHHCCCCCCCHH-HHHHHH---HHHHHHHHHH---HHHHCCCCEEEEECCCCCCCCCCCCCCHH
T ss_conf 1104138899999988887179962120-269999---8876788987---65630463588731455435677532116
Q ss_pred CHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCCC
Q ss_conf 05788752143782697248899999999997435348868985660221080126887893799860351577643344
Q gi|254781051|r 746 RLERFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVVSSLSDMTCGSVFQAVLSDDAEYHG 825 (957)
Q Consensus 746 RlERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~d~~~g~~F~~vi~d~~~~~~ 825 (957)
--.=|| ..-.||.|..|+.+....++|+.-+. ....|.++..|+.-+.... ....+.+..|. + .+...
T Consensus 490 ~d~~~~--~~iPn~~v~~P~d~~e~~~~l~~a~~-~~~~p~~i~~~r~~~~~~~-~~~~~~~~~G~-y-~~~~~------ 557 (675)
T 1itz_A 490 EHLVSF--RAMPNILMLRPADGNETAGAYKVAVL-NRKRPSILALSRQKLPHLP-GTSIEGVEKGG-Y-TISDN------ 557 (675)
T ss_dssp SHHHHH--HSSSSCEEECCCSHHHHHHHHHHHHH-CTTSCEEEEECSSCBCCCT-TCCHHHHTTSS-E-EEEEC------
T ss_pred HHHHHH--HCCCCCEEECCCCHHHHHHHHHHHHH-HCCCCCCCCCCCCCCCCCC-CCCHHHHCCCC-E-EEEEC------
T ss_conf 777787--43799566657789999999999876-1378720002556778767-76254532677-8-99766------
Q ss_pred CCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHCCC--CCEEEEEEECCCCCHHHHH---HHHHHHCCCCEEEEECCCCCC
Q ss_conf 45444579545768998688578999999997699--8689998401486828999---999853799839980678531
Q gi|254781051|r 826 KTSVKLKEDSHIRRVILCTGKVYYDLLDNRDMRNI--ADIYLLRIEQLYPFPEDYL---IKVLSRFVQAEIVWCQEEPQN 900 (957)
Q Consensus 826 ~~~~~~~~~~~v~rvi~csGKvyydL~~~r~~~~~--~~vaivRiEqLyPfP~~~l---~~~l~~y~~~e~vW~QEEp~N 900 (957)
...++.+=.|+++|-....-+++.+.... -++.+|-+=-+-||-.+.+ ..+|.... ..+|. .||..-
T Consensus 558 ------~~~~~~dv~i~~~G~~v~~al~aa~~L~~~gi~~~Vi~~~~~~plD~~~~~~~~~il~~~~-~~~vt-vE~~~~ 629 (675)
T 1itz_A 558 ------STGNKPDLIVMGTGSELEIAAKAADELRKEGKTVRVVSFVSWELFDEQSDEYKESVLPAAV-TARIS-IEAGST 629 (675)
T ss_dssp ------CSTTCCSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTC-CCEEE-ECSSCC
T ss_pred ------CCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHHHHCCCCC-CEEEE-EECCCH
T ss_conf ------5579998999975399999999999999669987999568871776076999986346778-75999-928818
Q ss_pred CCCHH
Q ss_conf 78457
Q gi|254781051|r 901 MGAWT 905 (957)
Q Consensus 901 ~GaW~ 905 (957)
.|...
T Consensus 630 ~g~~~ 634 (675)
T 1itz_A 630 LGWQK 634 (675)
T ss_dssp TTTHH
T ss_pred HHHHH
T ss_conf 88998
No 20
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=98.09 E-value=0.00066 Score=47.60 Aligned_cols=464 Identities=16% Similarity=0.146 Sum_probs=223.1
Q ss_pred CCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCE
Q ss_conf 31000445532367777641666544555654454047888625753334672588764510677443657999841602
Q gi|254781051|r 334 HLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQI 413 (957)
Q Consensus 334 HLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQI 413 (957)
||=.-=+++.|.|.|+....... .. ........+|.+|. ||+++. .|+++|.||+.... ...--|=|+-||++
T Consensus 115 ~~G~gls~A~G~A~A~k~l~~~~-~~-~~~~~~~~~v~~vi--GDG~l~-eG~~~EAln~ag~~--~l~nlivi~d~N~~ 187 (669)
T 2r8o_A 115 PLGQGIANAVGMAIAEKTLAAQF-NR-PGHDIVDHYTYAFM--GDGCMM-EGISHEVCSLAGTL--KLGKLIAFYDDNGI 187 (669)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHH-CB-TTBCCCCCCEEEEE--CHHHHH-SHHHHHHHHHHHHT--TCTTEEEEEEECSE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH-CC-CCCCCCCCEEEEEE--CCCCCC-CHHHHHHHHHHHHC--CCCCEEEEEECCCE
T ss_conf 82378999999999999861020-56-65566686699997--637545-21279999988446--88878999807845
Q ss_pred ECCCCCHHCCCCCCCCHHHHHHCC---CEE-EECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 012470102467784001122034---058-7426788999999999999999738973998642112565643542235
Q gi|254781051|r 414 GFTTNPSSARSCTYASDISKSIGI---PIF-HVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPSFT 489 (957)
Q Consensus 414 GFTT~p~d~RSs~Y~TDiAK~i~a---PI~-HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~fT 489 (957)
--.++.... ...|+++.+.+ -++ -++++|++++..|..-| +..-+|-.+|-.-..+-+|.-....
T Consensus 188 si~~~v~~~----~~~~~~~r~~a~Gw~v~~~~dg~~~~~i~~A~~~a---~~~~~kPt~Ii~~T~kG~G~~~~~g---- 256 (669)
T 2r8o_A 188 SIDGHVEGW----FTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEA---RAVTDKPSLLMCKTIIGFGSPNKAG---- 256 (669)
T ss_dssp ETTEEGGGT----CCCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHH---HHCCSSCEEEEEECCTTTTCTTTTT----
T ss_pred EEEECCCCC----CCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHH---HHHCCCCEEEEECCEECCCCCCCCC----
T ss_conf 543035764----33049998764582589851444378999999999---9844897077633564257733457----
Q ss_pred CHHHHHHHHHCCCH--H---HHHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHH-------HHHHCCCCCCCCCCCCCC
Q ss_conf 57888886718998--9---99999986--4489898999999999999977566-------654125876566665686
Q gi|254781051|r 490 QPMMYKTIRSHKSV--L---QLYADSLM--KNQVISKQELQSLANNWHKYLEAEY-------KESESYCPEKLGLLHNGE 555 (957)
Q Consensus 490 QP~mY~~I~~hp~v--~---~~Y~~~Li--~~g~it~~e~~~~~~~~~~~l~~~~-------~~~k~~~~~~~~~~~~~~ 555 (957)
..+.|-.. . ....+.|- ..+.....++............... .....+............
T Consensus 257 ------~~~~Hg~pl~~~~~~~~~e~lg~~~~~f~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (669)
T 2r8o_A 257 ------THDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMK 330 (669)
T ss_dssp ------SGGGTSSCCCHHHHHHHHHHHTCCCCTTCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ------CHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf ------44541687675059999998399987776718998888765466777767777888775322577889999862
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC
Q ss_conf 26667789999999988743689986205677888998998733435642114789888988635831578501002233
Q gi|254781051|r 556 NERKNSVSKEILKKIGSSIIRLPKSFNTHKIVERLMANRQKMIETGKGIDWSMAESLAFGSLCYEGYKVRLSGQDCERGT 635 (957)
Q Consensus 556 ~~~~T~v~~~~L~~i~~~l~~~Pe~f~~h~~v~k~~~~R~~~~~~~~~iDW~~AE~LA~~SLl~eG~~VRlsGQD~~RGT 635 (957)
....... ..............|+. +....+-.-+...+...--.+--.++|+...|
T Consensus 331 g~~~~~~-~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~d~~~s~ 386 (669)
T 2r8o_A 331 GEMPSDF-DAKAKEFIAKLQANPAK-----------------------IASRKASQNAIEAFGPLLPEFLGGSADLAPSN 386 (669)
T ss_dssp TCCCTTH-HHHHHHHHHHHHHSCCC-----------------------EEHHHHHHHHHHHHTTTCTTEEEEESSCHHHH
T ss_pred CCCCHHH-HHHHHHCCCCCCCCCCC-----------------------CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 7873232-22233112101234566-----------------------55333568899999986578745782101133
Q ss_pred CCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHH
Q ss_conf 32302799977888445563442789845999824311110134320221138653111000024424541022565542
Q gi|254781051|r 636 FSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGYSLNNLNALTIWEAQFGDFANGAQVILDQFIT 715 (957)
Q Consensus 636 FshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~p~~L~iWEAQFGDF~NgAQviiDqfis 715 (957)
-. ..++..+ +..-. .++ ++|-..+|.+..+|--|.++.. .+..+-+.|--|. |-..||.+-
T Consensus 387 ~~--------~~~~~~~--~~~~~--p~r--~~~~GIaE~~~v~~a~Gla~~g--~~~p~~~~~~~f~---~r~~~qi~~ 447 (669)
T 2r8o_A 387 LT--------LWSGSKA--INEDA--AGN--YIHYGVREFGMTAIANGISLHG--GFLPYTSTFLMFV---EYARNAVRM 447 (669)
T ss_dssp TC--------CCTTCCB--TTTCT--TCS--EEECCSCHHHHHHHHHHHHHHS--SCEEEEEEEGGGG---GTTHHHHHH
T ss_pred CC--------CCCCCCC--CCCCC--CCC--CCCCCHHHHHHHHHHHHHHHCC--CCCCCCCCCHHHH---HHHHHHHHH
T ss_conf 32--------1211012--34589--867--0234478999999987998769--9866301002677---666589999
Q ss_pred HHHHHHCCCCCCEEECCC---CCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCC
Q ss_conf 025762333681354368---88888876564405788752143782697248899999999997435348868985660
Q gi|254781051|r 716 AGEQKWLCTSNLVCLLPH---GYEGQGPEHSSARLERFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAPK 792 (957)
Q Consensus 716 s~e~KW~~~sglvllLPH---GyeGqGPEHSSaRlERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPK 792 (957)
. -|.+.. .|+..-| ++-+-||-|-+- |-.--|..-.||.|+.|+.+...-.+++.=+. ....|.++..|+
T Consensus 448 ~---~~~~~~-~v~v~~~~~~~~g~dG~TH~~~--~d~~~l~~iPn~~v~~P~d~~e~~~~~~~a~~-~~~~p~~~~~~~ 520 (669)
T 2r8o_A 448 A---ALMKQR-QVMVYTHDSIGLGEDGPTHQPV--EQVASLRVTPNMSTWRPCDQVESAVAWKYGVE-RQDGPTALILSR 520 (669)
T ss_dssp H---HHTTCC-CEEEEECCSGGGCTTCTTTCCS--SHHHHHHTSTTCEEECCSSHHHHHHHHHHHHH-CSSSCEEEECCS
T ss_pred H---HHCCCC-EEEEEECCCCCCCCCCCCHHHH--HHHHHHCCCCCEEEECCCCHHHHHHHHHHHHH-HCCCCEEEECCC
T ss_conf 8---762676-0899824542116887510012--10444406776157657999999999999987-338960430254
Q ss_pred HHHCCCCC-CCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHC---CCCCEEEEEE
Q ss_conf 22108012-6887893799860351577643344454445795457689986885789999999976---9986899984
Q gi|254781051|r 793 SLLRHKRV-VSSLSDMTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRRVILCTGKVYYDLLDNRDMR---NIADIYLLRI 868 (957)
Q Consensus 793 sLLR~~~a-~S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~rvi~csGKvyydL~~~r~~~---~~~~vaivRi 868 (957)
..+....- .....++..|. .|+-|.. . .-+-+|+.+|-....-+++.+.. |+ ++.+|-+
T Consensus 521 ~~~~~~~~~~~~~~~~~~G~---~~l~~~~-----------~--~~dv~iia~G~~v~~al~aa~~L~~~Gi-~~~Vi~~ 583 (669)
T 2r8o_A 521 QNLAQQERTEEQLANIARGG---YVLKDCA-----------G--QPELIFIATGSEVELAVAAYEKLTAEGV-KARVVSM 583 (669)
T ss_dssp SEECCCCCCHHHHHHGGGSC---EEEECCS-----------S--SCSEEEEECGGGHHHHHHHHHHHHHHTC-CEEEEEC
T ss_pred CCCCCCCCCCCCHHHCCCCE---EEEEECC-----------C--CCCEEEEEEHHHHHHHHHHHHHHHHCCC-CEEEEEC
T ss_conf 55764333421033314513---9999769-----------9--9999999742999999999999996199-8799978
Q ss_pred ECCCCCHHHHHHHHHHHCCC
Q ss_conf 01486828999999853799
Q gi|254781051|r 869 EQLYPFPEDYLIKVLSRFVQ 888 (957)
Q Consensus 869 EqLyPfP~~~l~~~l~~y~~ 888 (957)
=-+-||..+.+....+..+.
T Consensus 584 ~~~kplD~~~~~~~~~~l~~ 603 (669)
T 2r8o_A 584 PSTDAFDKQDAAYRESVLPK 603 (669)
T ss_dssp SCHHHHHTSCHHHHHHHSCT
T ss_pred CCCCHHHHHHHHHHHHHCCC
T ss_conf 98727777449999862688
No 21
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=97.05 E-value=0.024 Score=35.79 Aligned_cols=204 Identities=14% Similarity=0.144 Sum_probs=122.7
Q ss_pred EEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCC--CCCCCCCCC
Q ss_conf 982431111013432022113865311100002442454102256554202576233368135436888--888876564
Q gi|254781051|r 667 VVNSFLSEQAVLGFEYGYSLNNLNALTIWEAQFGDFANGAQVILDQFITAGEQKWLCTSNLVCLLPHGY--EGQGPEHSS 744 (957)
Q Consensus 667 v~nS~LSE~avlgFEyGys~~~p~~L~iWEAQFGDF~NgAQviiDqfiss~e~KW~~~sglvllLPHGy--eGqGPEHSS 744 (957)
.+|...+|.+..++--|+++.. .+.-|-+.|.-|. |-..||.+-.+ |.+...++...+-|. -+-||-|-+
T Consensus 404 ~~~~gIaE~~~~~~a~Gla~~~--g~~p~~~~~~~f~---~~~~~~i~~~~---~~~~~~~~~~~~~g~~~g~dG~tHq~ 475 (673)
T 1r9j_A 404 YIRFGVREHAMCAILNGLDAHD--GIIPFGGTFLNFI---GYALGAVRLAA---ISHHRVIYVATHDSIGVGEDGPTHQP 475 (673)
T ss_dssp EEECCSCHHHHHHHHHHHHHHS--SCEEEEEEEGGGG---GGGHHHHHHHH---HHTCCCEEEEECCSGGGCTTCTTTCC
T ss_pred CCCCCHHHHHHHHHHHHHHHCC--CCCEEEEEEEHHC---CCCCHHHHHHH---HCCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf 2111134557999999999829--9603887311011---22309999876---43577258741464433577644352
Q ss_pred CCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCC
Q ss_conf 40578875214378269724889999999999743534886898566022108012688789379986035157764334
Q gi|254781051|r 745 ARLERFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAPKSLLRHKRVVSSLSDMTCGSVFQAVLSDDAEYH 824 (957)
Q Consensus 745 aRlERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~d~~~g~~F~~vi~d~~~~~ 824 (957)
.-- .-.|.+=.||.|+.|+.+.....+++.-+.+....+. +..++.-.. +.-....+.+..|. . .++..
T Consensus 476 ~~d--~~~lr~iPn~~v~~P~d~~e~~~~~~~~~~~~~~~~~-~~~~r~~~~-~~~~~~~~~~~~G~-~-~~~~~----- 544 (673)
T 1r9j_A 476 VEL--VAALRAMPNLQVIRPSDQTETSGAWAVALSSIHTPTV-LCLSRQNTE-PQSGSSIEGVRHGA-Y-SVVDV----- 544 (673)
T ss_dssp SSH--HHHHHHSTTCEEECCSSHHHHHHHHHHHHHCTTCCEE-EECCSSEEC-CCTTCCHHHHHTSC-E-EEECC-----
T ss_pred HHH--HHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCCEE-EECCCCCCC-CCCCCCHHHHCCCC-E-EEEEC-----
T ss_conf 678--8998728994323799999999999986630689513-322777878-76766555651677-8-99987-----
Q ss_pred CCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHCCC-CCEEEEEEECCCCCHH---HHHHHHHHHCCCC-EEEEECCCCC
Q ss_conf 445444579545768998688578999999997699-8689998401486828---9999998537998-3998067853
Q gi|254781051|r 825 GKTSVKLKEDSHIRRVILCTGKVYYDLLDNRDMRNI-ADIYLLRIEQLYPFPE---DYLIKVLSRFVQA-EIVWCQEEPQ 899 (957)
Q Consensus 825 ~~~~~~~~~~~~v~rvi~csGKvyydL~~~r~~~~~-~~vaivRiEqLyPfP~---~~l~~~l~~y~~~-e~vW~QEEp~ 899 (957)
+.-+=.|+++|-.....+++-+.... -++.+|-+--+=||.. .-+..++ ++. -+|.+ ||..
T Consensus 545 ----------~~~~v~iia~G~~v~~al~Aa~~L~~~i~~~Vv~~~s~kpld~~~~~~~~~v~---~~~~~vvtv-E~~~ 610 (673)
T 1r9j_A 545 ----------PDLQLVIVASGSEVSLAVDAAKALSGELRVRVVSMPCQELFDAQPDTYRQAVL---PAGVPVVSV-EAYV 610 (673)
T ss_dssp ----------TTCSEEEEECGGGHHHHHHHHHHHTTTCCEEEEECSCHHHHHTSCHHHHHHHS---CTTSCEEEE-CSSC
T ss_pred ----------CCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHHHHH---CCCCCEEEE-ECCC
T ss_conf ----------99989999750999999999999867898699977877635476899999862---569938999-5993
Q ss_pred CCCC
Q ss_conf 1784
Q gi|254781051|r 900 NMGA 903 (957)
Q Consensus 900 N~Ga 903 (957)
-.|.
T Consensus 611 ~~g~ 614 (673)
T 1r9j_A 611 SFGW 614 (673)
T ss_dssp CTTG
T ss_pred CCCC
T ss_conf 2255
No 22
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=95.88 E-value=0.086 Score=31.60 Aligned_cols=119 Identities=24% Similarity=0.267 Sum_probs=68.5
Q ss_pred CCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEC
Q ss_conf 87731000445532367777641666544555654454047888625753334672588764510677443657999841
Q gi|254781051|r 331 NPSHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIIN 410 (957)
Q Consensus 331 NPSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvN 410 (957)
.-+-+-.--|.+.|-.-|.-+ ++|+ +|-||.+|.= -+.|-..+. .|+.- .+-||+|
T Consensus 411 g~~~mG~~l~~AiGa~~a~p~----------------~~vv--~i~GDgsf~~--~~~eL~ta~---~~~lp-i~ivV~N 466 (590)
T 1v5e_A 411 LFATMGIAIPGGLGAKNTYPD----------------RQVW--NIIGDGAFSM--TYPDVVTNV---RYNMP-VINVVFS 466 (590)
T ss_dssp SSCCTTCHHHHHHHHHHHCTT----------------SCEE--EEEEHHHHHH--HGGGHHHHH---HTTCC-CEEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHCCC----------------CEEE--EEECCHHHHC--CHHHHHHHH---HHCCC-CEEEEEE
T ss_conf 555454476298999984987----------------8499--8637705534--689999999---74899-4899998
Q ss_pred CCE-ECCC-CCHHCCCCCCCCH--------HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf 602-0124-7010246778400--------1122034058742678899999999999999973897399864211
Q gi|254781051|r 411 NQI-GFTT-NPSSARSCTYASD--------ISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYR 476 (957)
Q Consensus 411 NQI-GFTT-~p~d~RSs~Y~TD--------iAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YR 476 (957)
|+- |..- ...+.....|.|| +|++++++-+.| ++++..-.+.+=|++. ++-.+-++||+.+=+
T Consensus 467 N~g~g~i~~~~~~~~~~~~~~~~~~~df~~lA~a~G~~~~~v--~~~~el~~al~~a~~~-~~~~~p~lIev~vd~ 539 (590)
T 1v5e_A 467 NTEYAFIKNKYEDTNKNLFGVDFTDVDYAKIAEAQGAKGFTV--SRIEDMDRVMAEAVAA-NKAGHTVVIDCKITQ 539 (590)
T ss_dssp CSSCTTGGGTTSSSCCSCCCCCCCCCCHHHHHHHTTSEEEEE--CBHHHHHHHHHHHHHH-HHTTCCEEEEEECCS
T ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEEEE--CCHHHHHHHHHHHHHC-CCCCCEEEEEEEECC
T ss_conf 784443328778608986768799999999999779879998--9999999999999854-999984999999788
No 23
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=95.67 E-value=0.0015 Score=44.92 Aligned_cols=104 Identities=18% Similarity=0.225 Sum_probs=64.3
Q ss_pred HHCCEEEEECCHHHHHHHHHHHHCCCC--CEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH
Q ss_conf 457689986885789999999976998--689998401486828999999853799839980678531784578997699
Q gi|254781051|r 835 SHIRRVILCTGKVYYDLLDNRDMRNIA--DIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQNMGAWTFIEPYLE 912 (957)
Q Consensus 835 ~~v~rvi~csGKvyydL~~~r~~~~~~--~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N~GaW~~v~~rl~ 912 (957)
++.+-+|+|+|..|....++-+..+.+ +|.++++-.++|||.+.+.+.++++..+= |=|| |.|.. ..-++
T Consensus 290 ~da~~~ii~~Gs~~~~~~~a~~~l~~~g~~v~~~~~~~~~P~p~~~i~~~~~~~k~v~---vvE~--n~g~l---~~~i~ 361 (395)
T 1yd7_A 290 EDAEIGVVATGIVARSALRAVKMLREEGIKAGLLKIETIWPFDFELIERIAERVDKLY---VPEM--NLGQL---YHLIK 361 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEE---EECC--CHHHH---HHHHH
T ss_conf 8861899963602699999999999669974499978027999999999981699899---9708--73199---99999
Q ss_pred HHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 998750567760189753664672338678999999999998719
Q gi|254781051|r 913 KVLHSIGADYSRVRYVGRLPSASTAVGHMSRHLEQLSSFIEDALK 957 (957)
Q Consensus 913 ~~l~~~~~~~~~~~y~gR~~~aspA~G~~~~H~~e~~~li~~a~~ 957 (957)
..+........-.+|-||+..+ .|..+.|++.||
T Consensus 362 ~~~~~~~~~~~i~~~~G~~~~p-----------~ei~~~i~~~~k 395 (395)
T 1yd7_A 362 EGANGKAEVKLISKIGGEVHTP-----------MEIFEFIRREFK 395 (395)
T ss_dssp ---------------------------------------------
T ss_pred HHHCCCCCCEEEECCCCCCCCH-----------HHHHHHHHHHHC
T ss_conf 9738999832895509964899-----------999999999759
No 24
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=95.53 E-value=0.15 Score=29.70 Aligned_cols=443 Identities=13% Similarity=0.138 Sum_probs=199.8
Q ss_pred CCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCE
Q ss_conf 31000445532367777641666544555654454047888625753334672588764510677443657999841602
Q gi|254781051|r 334 HLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQI 413 (957)
Q Consensus 334 HLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQI 413 (957)
||=.-=+++.|.|+|+.....- ... ........+|.+++ ||++.. .|+++|.||+..-.+ ..--|-|+=||++
T Consensus 117 ~lG~g~s~A~G~A~a~~~~~~~-~~~-~~~~~~~~~v~~~i--GDG~l~-eG~~~EAl~~a~~~~--l~nLivi~d~N~~ 189 (663)
T 3kom_A 117 PLGQGVANAVGMALGEKLLSDR-YNT-PDLKVIDHHTYVFL--GDGCLM-EGVSHEACSLAGTLG--LNKLVAFWDDNNI 189 (663)
T ss_dssp STTHHHHHHHHHHHHHHHHHHH-HCB-TTBCSCCCCEEEEE--CHHHHH-SHHHHHHHHHHHHHT--CTTEEEEEEECC-
T ss_pred CCHHHHHHHHHHHHHHHHHCCC-CCC-CCCCCCCCEEEEEE--CCCCCC-CHHHHHHHHHHHHCC--CCCEEEEECCCCC
T ss_conf 7068899999999999983012-367-64455675089997--665554-355899999996477--7765999758852
Q ss_pred ECCCCCHHCCCCCCCCHHHHHH---CCCEEE-ECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC-CCCCC
Q ss_conf 0124701024677840011220---340587-426788999999999999999738973998642112565643-54223
Q gi|254781051|r 414 GFTTNPSSARSCTYASDISKSI---GIPIFH-VNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEG-DEPSF 488 (957)
Q Consensus 414 GFTT~p~d~RSs~Y~TDiAK~i---~aPI~H-VN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~-DeP~f 488 (957)
--..+.... . ..++.+.+ +--++. +++++.+....+..-+ .....+-.+|-.-.-.-+|.-.. +.+..
T Consensus 190 ~i~~~~~~~-~---~~~~~~rf~a~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~p~~i~~~T~kg~G~~~~~~~~~~ 262 (663)
T 3kom_A 190 SIDGDTKGW-F---SDNTPERFRAYGWHVIENVDGHDFVAIEKAINEA---HSQQQKPTLICCKTVIGFGSPEKAGTASV 262 (663)
T ss_dssp ----CGGGT-C---CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHH---HHCSSSCEEEEEECCTTTTCTTTTTCSST
T ss_pred CCCCCCCCC-C---CCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH---HHCCCCCCEEECCCEEECCCCCCCCCCCC
T ss_conf 347864565-4---5117888760684589850675167788999876---53047851354255562488421357633
Q ss_pred C-------CHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH--HHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 5-------57888886718998999999986448989899999999999--99775666541258765666656862666
Q gi|254781051|r 489 T-------QPMMYKTIRSHKSVLQLYADSLMKNQVISKQELQSLANNWH--KYLEAEYKESESYCPEKLGLLHNGENERK 559 (957)
Q Consensus 489 T-------QP~mY~~I~~hp~v~~~Y~~~Li~~g~it~~e~~~~~~~~~--~~l~~~~~~~k~~~~~~~~~~~~~~~~~~ 559 (957)
. ++........++. +......++........ ..........+......
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 319 (663)
T 3kom_A 263 HGSPLSDQERASAAKELNWDY-----------QAFEIPQDVYKYWDAREKGQALEANWQGQRNLFKDS------------ 319 (663)
T ss_dssp TSSCCCHHHHHHHHHHTTCCC-----------CTTCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHTTS------------
T ss_pred CCCCCCHHHHHHHHHHHCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------
T ss_conf 565421057788988624556-----------676772467788876556668999988899986400------------
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH----CC-CEEEEECCCCCCC
Q ss_conf 778999999998874368998620567788899899873343564211478988898863----58-3157850100223
Q gi|254781051|r 560 NSVSKEILKKIGSSIIRLPKSFNTHKIVERLMANRQKMIETGKGIDWSMAESLAFGSLCY----EG-YKVRLSGQDCERG 634 (957)
Q Consensus 560 T~v~~~~L~~i~~~l~~~Pe~f~~h~~v~k~~~~R~~~~~~~~~iDW~~AE~LA~~SLl~----eG-~~VRlsGQD~~RG 634 (957)
...+....... ...+..+ -+......... ........+- -|++..|. .- .-+.+| .|...+
T Consensus 320 --~k~~~~~~~~~--~~~~~~~--~~~~~~~~~~~---~~~~~~~a~r----~a~~~~l~~l~~~~p~~~~~s-ad~~~~ 385 (663)
T 3kom_A 320 --PKFDEFERVLS--KELPVGL--ESAINDYIASQ---LSNPVKVATR----KASQMVLEVLCKNMPEMFGGS-ADLTGS 385 (663)
T ss_dssp --TTHHHHHHHHH--TCCCTTH--HHHHHHHHHHH---HHSCCCEEHH----HHHHHHHHHHHHHCTTEEEEE-CCC--C
T ss_pred --CCHHHHHHHHH--CCCCCCC--CCCCHHHHHHH---HHCCCCCHHH----HHHHHHHHHHHHHCCCEEEEC-CCCCCC
T ss_conf --20128888651--1233210--00201333333---4216660178----878999999997587859973-554577
Q ss_pred CCCCCEEEEEECCCCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHH
Q ss_conf 33230279997788844556344278984599982431111013432022113865311100002442454102256554
Q gi|254781051|r 635 TFSHRHAILCDQETGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGYSLNNLNALTIWEAQFGDFANGAQVILDQFI 714 (957)
Q Consensus 635 TFshRHavl~dq~t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~p~~L~iWEAQFGDF~NgAQviiDqfi 714 (957)
|...... ..+..-. ...++ .++....|.+..++--|.+... .+.-+-+-|.-| .|-..||.+
T Consensus 386 ~~~~~~~--------~~~~~~~---~~~~r--~~~~GIaE~~~~~~aagla~~g--g~~Pv~~~ys~F---~~ra~dqi~ 447 (663)
T 3kom_A 386 NNTNWSG--------SVWLNNT---QEGAN--YLSYGVREFGMAAIMNGLSLYG--GIKPYGGTFLVF---SDYSRNAIR 447 (663)
T ss_dssp CSCCCTT--------CCBTTTC---STTCC--EEECCSCHHHHHHHHHHHHHHS--SCEEEEEEEGGG---HHHHHHHHH
T ss_pred CCCCCCC--------CCCCCCC---CCCCC--CCHHHHHHHHHHHHHHHHHHCC--CCCCCEEEEEHH---HHHHHHHHH
T ss_conf 6532345--------5441124---46761--1004577678899988998659--964314675028---765257776
Q ss_pred HHHHHHHCCCCCCEEECCCC--CCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCC
Q ss_conf 20257623336813543688--8888876564405788752143782697248899999999997435348868985660
Q gi|254781051|r 715 TAGEQKWLCTSNLVCLLPHG--YEGQGPEHSSARLERFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMAPK 792 (957)
Q Consensus 715 ss~e~KW~~~sglvllLPHG--yeGqGPEHSSaRlERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~tPK 792 (957)
-.. .+....++....-| .-..||-|-+.--.=+|..+ .||.|+.|+.+...-.+++..+.. --.|-++..|+
T Consensus 448 ~~~---~~~~~~v~~~~~~~~~~g~dG~tH~~~~di~~~r~i--p~~~v~~P~d~~e~~~~~~~~~~~-~~~p~~~~~~~ 521 (663)
T 3kom_A 448 MSA---LMKQPVVHVMSHDSIGLGEDGPTHQPIEHVPSLRLI--PNLSVWRPADTIETMIAWKEAVKS-KDTPSVMVLTR 521 (663)
T ss_dssp HHH---HTTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHTS--TTCEEECCCSHHHHHHHHHHHHHC-SSCCEEEECCS
T ss_pred HHH---HCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCC--CCCEEECCCCHHHHHHHHHHHHHC-CCCCCCEEECC
T ss_conf 565---404760698304444434556677660149897347--885101788889999999999973-49984021047
Q ss_pred HHHCCCC-CCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHHHHCCCC--CEEEEEE
Q ss_conf 2210801-26887893799860351577643344454445795457689986885789999999976998--6899984
Q gi|254781051|r 793 SLLRHKR-VVSSLSDMTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRRVILCTGKVYYDLLDNRDMRNIA--DIYLLRI 868 (957)
Q Consensus 793 sLLR~~~-a~S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~rvi~csGKvyydL~~~r~~~~~~--~vaivRi 868 (957)
....... .-....++..|. .||-+. +.-+=.|+++|-.....+++.+....+ ++.+|-+
T Consensus 522 ~~~~~~~~~~~~~~~i~kG~---~~l~~~--------------~~~~v~iia~G~~v~~al~Aa~~L~~~gi~~~Vv~~ 583 (663)
T 3kom_A 522 QNLMPVVQTQHQVANIARGG---YLVKDN--------------PDAKLTIVATGSEVELAVKVANEFEKKGIKLNVASI 583 (663)
T ss_dssp SEECCCCCCHHHHHHHTTTC---EEEECC--------------TTCSCEEEECTTHHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCCCCCCCCCCHHHHCCEE---EEEEEC--------------CCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 78887443444344305715---999988--------------999899997319999999999999865998699977
No 25
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone, THDP, metal, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=95.32 E-value=0.061 Score=32.73 Aligned_cols=93 Identities=15% Similarity=0.155 Sum_probs=43.9
Q ss_pred EEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCC-----CCHHCCCCCCC----CH---HHHHHCC
Q ss_conf 478886257533346725887645106774436579998416020124-----70102467784----00---1122034
Q gi|254781051|r 370 VLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTT-----NPSSARSCTYA----SD---ISKSIGI 437 (957)
Q Consensus 370 vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT-----~p~d~RSs~Y~----TD---iAK~i~a 437 (957)
|++|. ||.+|-=.+--.+|..--+|| .+-||+||+ |+.. .....+...|+ .| +|+.+++
T Consensus 436 vv~i~--GDGsf~~~~~eL~Ta~r~~lp------i~vvV~NN~-g~~i~~~~~~~~~~~~~~~~~~~~~d~~~lA~a~G~ 506 (556)
T 3hww_A 436 TLAIV--GDLSALYDLNALALLRQVSAP------LVLIVVNNN-GGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFEL 506 (556)
T ss_dssp EEEEE--EHHHHHHTGGGHHHHTTCSSC------EEEEEEESC-C-----------------CCCCCCCCSHHHHHHTTC
T ss_pred CEEEE--CCHHHHCCHHHHHHHHHHCCC------CEEEEEECC-CCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
T ss_conf 51485--663664267999999984969------589999799-767761020134323420478999999999996799
Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 0587426788999999999999999738973998642112
Q gi|254781051|r 438 PIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRR 477 (957)
Q Consensus 438 PI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr 477 (957)
+- +..++++..-.+.+-|+ +.++-.+||+++-+.
T Consensus 507 ~~--~~v~~~~el~~al~~a~----~~~~p~lIeV~id~~ 540 (556)
T 3hww_A 507 KY--HRPQNWQELETAFADAW----RTPTTTVIEMVVNDT 540 (556)
T ss_dssp EE--ECCSSHHHHHHHHHHHT----TSSSEEEEEEECCSS
T ss_pred EE--EEECCHHHHHHHHHHHH----HCCCEEEEEEEECCH
T ss_conf 69--99689999999999998----689819999980827
No 26
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, enzyme, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=95.19 E-value=0.15 Score=29.85 Aligned_cols=39 Identities=5% Similarity=0.121 Sum_probs=25.7
Q ss_pred HHHHCCCCCEEEEECCCHHHHHHHHHHHH--CCCCCCCEEE
Q ss_conf 87521437826972488999999999974--3534886898
Q gi|254781051|r 750 FLQMCAENNMYVANCTSPANYFHILRRQI--YDRSSRPLIM 788 (957)
Q Consensus 750 fLQl~a~~N~~V~~~ttpAq~FH~LRRQ~--~r~~rkPLiv 788 (957)
|-.||.--.+.-...++|..+--+|++-. .....+|.+|
T Consensus 534 f~~lA~a~G~~~~~V~~~~eL~~al~~A~~~~~~~~~p~lI 574 (616)
T 2pan_A 534 HVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVV 574 (616)
T ss_dssp HHHHHHHTTCEEEEECSGGGHHHHHHHHHHHHHHHCSCEEE
T ss_pred HHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999978997999799999999999999876048985999
No 27
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=94.73 E-value=0.25 Score=28.07 Aligned_cols=26 Identities=15% Similarity=0.120 Sum_probs=12.3
Q ss_pred HHHHCCCCCEEEEECCCHHHHHHHHH
Q ss_conf 87521437826972488999999999
Q gi|254781051|r 750 FLQMCAENNMYVANCTSPANYFHILR 775 (957)
Q Consensus 750 fLQl~a~~N~~V~~~ttpAq~FH~LR 775 (957)
-|.+.+-.|-.|+..+.-||+-|+|+
T Consensus 1025 ~~ia~~~g~~YVA~~a~~~~~~~~~k 1050 (1231)
T 2c42_A 1025 ARMVMTYGYVYVATVSMGYSKQQFLK 1050 (1231)
T ss_dssp HHHHHTTSSSEEEEECTTTCHHHHHH
T ss_pred HHHHHHCCCCEEEEEECCCCHHHHHH
T ss_conf 99998479976999757799899999
No 28
>2ez9_A Pyruvate oxidase; TPP enzyme, reaction intermediate analogue, oxidoreductase; HET: TDK FAD; 1.60A {Lactobacillus plantarum} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1y9d_A* 1pow_A* 1pox_A*
Probab=94.47 E-value=0.059 Score=32.82 Aligned_cols=20 Identities=20% Similarity=0.152 Sum_probs=8.8
Q ss_pred CHHHHH----HCCCCCCCCCCEEE
Q ss_conf 013432----02211386531110
Q gi|254781051|r 676 AVLGFE----YGYSLNNLNALTIW 695 (957)
Q Consensus 676 avlgFE----yGys~~~p~~L~iW 695 (957)
+.||+. .|-++.+|+..|+-
T Consensus 420 ~~mG~~lp~aiGa~~A~p~r~vi~ 443 (603)
T 2ez9_A 420 ATMGVGIPGAIAAKLNYPERQVFN 443 (603)
T ss_dssp CCTTCHHHHHHHHHHHCTTSCEEE
T ss_pred CCCCCHHHHHHHHHHHCCCCCEEE
T ss_conf 776454489999999789995467
No 29
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, alpha chain; structural genomics, PSI-2, protein structure initiative; 1.90A {Thermoplasma acidophilum}
Probab=93.16 E-value=0.14 Score=29.96 Aligned_cols=88 Identities=19% Similarity=0.190 Sum_probs=60.1
Q ss_pred CCEEEEECCHHHHHHHHHHHHCCC--CCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCC-CCCHHHHHHHHHH
Q ss_conf 768998688578999999997699--8689998401486828999999853799839980678531-7845789976999
Q gi|254781051|r 837 IRRVILCTGKVYYDLLDNRDMRNI--ADIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQN-MGAWTFIEPYLEK 913 (957)
Q Consensus 837 v~rvi~csGKvyydL~~~r~~~~~--~~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N-~GaW~~v~~rl~~ 913 (957)
..-+|+|.|-.+....++.+.... .++.++++-.++|||.+.+.+.++++...=+ =|+ | .|.|.-. +..
T Consensus 14 adi~iv~~Gs~~~~~~eA~~~L~~~gi~~~vi~~~~~~P~~~~~l~~~~~~~~~viv---vE~--n~~G~l~~~---l~~ 85 (118)
T 3ju3_A 14 ADITFVTWGSQKGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSSANLVID---VES--NYTAQAAQM---IKL 85 (118)
T ss_dssp CSEEEEEEGGGHHHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHTTCSCCCC---CCC--CCCCCHHHH---HHH
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHCCCEEEE---EEC--CCCHHHHHH---HHH
T ss_conf 999999827729999999999987499733131001576888999999955796999---919--972299999---999
Q ss_pred HHHHCCCCCCEEEEEECCCC
Q ss_conf 98750567760189753664
Q gi|254781051|r 914 VLHSIGADYSRVRYVGRLPS 933 (957)
Q Consensus 914 ~l~~~~~~~~~~~y~gR~~~ 933 (957)
.+. ......-++|-|||-.
T Consensus 86 ~~~-~~~~~~i~~~~G~p~t 104 (118)
T 3ju3_A 86 YTG-IDIKNKILKYNGRHMT 104 (118)
T ss_dssp HHC-CCCCCCCCCBTTBCCC
T ss_pred HHC-CCCCCCEEEECCCCCC
T ss_conf 817-7678656887893389
No 30
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=92.63 E-value=0.27 Score=27.88 Aligned_cols=15 Identities=27% Similarity=0.308 Sum_probs=7.1
Q ss_pred CCHHHHHHHHHHHHH
Q ss_conf 788999999999999
Q gi|254781051|r 445 DDPEAVIRVVRMAVS 459 (957)
Q Consensus 445 DdpEav~~~~~lA~~ 459 (957)
+.++.+.++.+.|..
T Consensus 136 ~~~~~~~~a~~~A~~ 150 (549)
T 3eya_A 136 QIPQVLAIAMRKAVL 150 (549)
T ss_dssp GHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
T ss_conf 568999999998741
No 31
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open active site loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=90.45 E-value=0.65 Score=24.97 Aligned_cols=43 Identities=21% Similarity=0.217 Sum_probs=29.5
Q ss_pred HHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEE--EECCC
Q ss_conf 887521437826972488999999999974353488689--85660
Q gi|254781051|r 749 RFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLI--MMAPK 792 (957)
Q Consensus 749 RfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLi--v~tPK 792 (957)
+|.++|.--.+.-..++|+..+=-+|++=+ ..-.+|-+ |++++
T Consensus 498 d~~~~A~a~G~~~~~v~~~~el~~al~~a~-~~~~~~~liev~vd~ 542 (565)
T 2nxw_A 498 RFADMAAGMGGDGVRVRTRAELKAALDKAF-ATRGRFQLIEAMIPR 542 (565)
T ss_dssp CHHHHTGGGTSEEEEECBHHHHHHHHHHHH-HCCSSCEEEEEECCT
T ss_pred CHHHHHHHCCCEEEEECCHHHHHHHHHHHH-HCCCCEEEEEEEECC
T ss_conf 999999977986999799999999999998-447973999998087
No 32
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=88.45 E-value=0.97 Score=23.64 Aligned_cols=10 Identities=0% Similarity=-0.190 Sum_probs=3.5
Q ss_pred HHHHHCCCEE
Q ss_conf 1122034058
Q gi|254781051|r 431 ISKSIGIPIF 440 (957)
Q Consensus 431 iAK~i~aPI~ 440 (957)
+|+.+++.-+
T Consensus 521 lA~a~G~~~~ 530 (578)
T 3lq1_A 521 AAAFYDADYH 530 (578)
T ss_dssp HHHHTTCEEE
T ss_pred HHHHCCCEEE
T ss_conf 9986798699
No 33
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=88.30 E-value=1.3 Score=22.72 Aligned_cols=37 Identities=14% Similarity=0.152 Sum_probs=19.4
Q ss_pred HHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 875214378269724889999999999743534886898
Q gi|254781051|r 750 FLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIM 788 (957)
Q Consensus 750 fLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv 788 (957)
|-+||.--.+.-..++|+.++=-+|.+-.. -.||-||
T Consensus 504 ~~~lA~~~G~~~~~v~~~~el~~al~~a~~--~~~p~li 540 (563)
T 2uz1_A 504 YHGVAAAFGADGYHVDSVESFSAALAQALA--HNRPACI 540 (563)
T ss_dssp HHHHHHHTTCEEEEECSHHHHHHHHHHHHH--SSSCEEE
T ss_pred HHHHHHHCCCEEEEECCHHHHHHHHHHHHH--CCCCEEE
T ss_conf 999999779979997999999999999983--8995899
No 34
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=85.93 E-value=0.97 Score=23.66 Aligned_cols=23 Identities=22% Similarity=0.317 Sum_probs=11.7
Q ss_pred CCEEEEEECCCCCCCHHCCHHHH
Q ss_conf 96189997178773100044553
Q gi|254781051|r 321 GKDVKLLLQSNPSHLEFVDPVVI 343 (957)
Q Consensus 321 g~~v~lsL~~NPSHLEaVnPVv~ 343 (957)
|+..-+.....|--+-+++.++.
T Consensus 72 g~~~v~~~tsG~g~~N~l~a~~e 94 (566)
T 1ozh_A 72 GKAGVALVTSGPGCSNLITGMAT 94 (566)
T ss_dssp SSCEEEEECSTHHHHTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHH
T ss_conf 99889998314789999999999
No 35
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=85.64 E-value=1.8 Score=21.69 Aligned_cols=29 Identities=14% Similarity=0.238 Sum_probs=13.5
Q ss_pred HHHHCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf 87521437826972488999999999974
Q gi|254781051|r 750 FLQMCAENNMYVANCTSPANYFHILRRQI 778 (957)
Q Consensus 750 fLQl~a~~N~~V~~~ttpAq~FH~LRRQ~ 778 (957)
|-+||.--.+.-...+++.++=-+|.+=+
T Consensus 505 ~~~lA~a~G~~~~~v~~~~el~~al~~a~ 533 (589)
T 2pgn_A 505 WVGIAKAFGAYGESVRETGDIAGALQRAI 533 (589)
T ss_dssp HHHHHHHHTCEEEECTTTCCHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEECCHHHHHHHHHHHH
T ss_conf 99999977995999799999999999998
No 36
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=82.42 E-value=2.4 Score=20.74 Aligned_cols=26 Identities=15% Similarity=-0.052 Sum_probs=10.7
Q ss_pred HHHCCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 75214378269724889999999999
Q gi|254781051|r 751 LQMCAENNMYVANCTSPANYFHILRR 776 (957)
Q Consensus 751 LQl~a~~N~~V~~~ttpAq~FH~LRR 776 (957)
-.+|.--++.....+|+.++=-+|++
T Consensus 506 ~~lA~a~G~~~~~v~~~~el~~al~~ 531 (568)
T 2c31_A 506 DMMMEAFGGKGYVANTPAELKAALEE 531 (568)
T ss_dssp HHHHHTTTCEEEEESSHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEECCHHHHHHHHHH
T ss_conf 99999789979997989999999999
No 37
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=81.17 E-value=0.75 Score=24.48 Aligned_cols=27 Identities=11% Similarity=-0.098 Sum_probs=14.6
Q ss_pred HHHHCCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 875214378269724889999999999
Q gi|254781051|r 750 FLQMCAENNMYVANCTSPANYFHILRR 776 (957)
Q Consensus 750 fLQl~a~~N~~V~~~ttpAq~FH~LRR 776 (957)
|-.||.--++.-..++||..+=-+|++
T Consensus 538 f~~lA~a~G~~~~~v~~~~eL~~al~~ 564 (604)
T 2x7j_A 538 FKHAAALYGGTYSCPASWDEFKTAYAP 564 (604)
T ss_dssp THHHHHHTTCEEECCSSHHHHHHHCCC
T ss_pred HHHHHHHCCCEEEEECCHHHHHHHHHH
T ss_conf 999999789979996999999999999
No 38
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=80.89 E-value=2.6 Score=20.35 Aligned_cols=48 Identities=8% Similarity=0.120 Sum_probs=35.2
Q ss_pred HHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEE--EECCCHHHCCCC
Q ss_conf 87521437826972488999999999974353488689--856602210801
Q gi|254781051|r 750 FLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLI--MMAPKSLLRHKR 799 (957)
Q Consensus 750 fLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLi--v~tPKsLLR~~~ 799 (957)
|-.|+.--.+.-..++|+..+--+|.+-+. ..+|.+ |++.+.---+|+
T Consensus 595 f~~lA~a~G~~~~~V~~~~eL~~al~~al~--~~gp~lIeV~vd~~~~v~p~ 644 (677)
T 1t9b_A 595 FIKLAEAMGLKGLRVKKQEELDAKLKEFVS--TKGPVLLEVEVDKKVPVLPM 644 (677)
T ss_dssp HHHHHHHTTCEEEEECSHHHHHHHHHHHHH--CSSCEEEEEEBCSSCCCSSB
T ss_pred HHHHHHHCCCEEEEECCHHHHHHHHHHHHH--CCCCEEEEEEECCCCCCCCC
T ss_conf 999999779869996999999999999985--89919999997898887898
No 39
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=80.32 E-value=2.8 Score=20.22 Aligned_cols=63 Identities=16% Similarity=0.308 Sum_probs=44.8
Q ss_pred HHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEE--ECCCHHHCCCCCCCCHHHHCCCCCEEECCCCC
Q ss_conf 8875214378269724889999999999743534886898--56602210801268878937998603515776
Q gi|254781051|r 749 RFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIM--MAPKSLLRHKRVVSSLSDMTCGSVFQAVLSDD 820 (957)
Q Consensus 749 RfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv--~tPKsLLR~~~a~S~l~d~~~g~~F~~vi~d~ 820 (957)
.|.+++.--.+....+++|.++=-+|++-+. -.+|.+| ++++.---.|. ..+|+.+..+|.+-
T Consensus 515 D~~~iA~a~G~~~~~v~~~~el~~al~~a~~--~~gp~lIeV~vd~~~~~~p~-------~~~~~~~~~~~~~~ 579 (590)
T 1ybh_A 515 NMLLFAAACGIPAARVTKKADLREAIQTMLD--TPGPYLLDVICPHQEHVLPM-------IPSGGTFNDVITEG 579 (590)
T ss_dssp CHHHHHHHTTCCEEEECBHHHHHHHHHHHHH--SSSCEEEEEECCTTCCCCSB-------CCTTCCGGGCBCSC
T ss_pred CHHHHHHHCCCEEEEECCHHHHHHHHHHHHH--CCCCEEEEEEECCCCCCCCC-------CCCCCCHHHHHHCC
T ss_conf 9999998689869996999999999999983--89939999997887677898-------99889899996146
No 40
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=78.25 E-value=3.2 Score=19.77 Aligned_cols=37 Identities=19% Similarity=0.389 Sum_probs=20.6
Q ss_pred HHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 875214378269724889999999999743534886898
Q gi|254781051|r 750 FLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIM 788 (957)
Q Consensus 750 fLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv 788 (957)
|-++|.--...-..++|+..+=-+|++-+.. .+|.+|
T Consensus 519 ~~~lA~~~G~~~~~v~~~~el~~al~~a~~~--~~p~lI 555 (573)
T 2iht_A 519 FVALAEANGVDATRATNREELLAALRKGAEL--GRPFLI 555 (573)
T ss_dssp HHHHHHHTTCEEEECCSHHHHHHHHHHHHTS--SSCEEE
T ss_pred HHHHHHHCCCEEEEECCHHHHHHHHHHHHHC--CCCEEE
T ss_conf 9999997899899979999999999999838--982999
No 41
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, thiamin thiazolone diphosphate, inhibitor; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=75.53 E-value=3.7 Score=19.25 Aligned_cols=28 Identities=14% Similarity=0.130 Sum_probs=14.2
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHH
Q ss_conf 999999873791079980676552689998
Q gi|254781051|r 251 EEIIRQGVQQGVDEMILGMAHRGRLNVLSQ 280 (957)
Q Consensus 251 ~~ii~~a~~~Gv~eiviGMaHRGRLNVL~N 280 (957)
+++++.-.+.||+.|+ |.|= +|..-|..
T Consensus 6 ~~~~e~L~~~Gv~~vf-g~pG-~~~~~l~~ 33 (528)
T 1q6z_A 6 GTTYELLRRQGIDTVF-GNPG-SNALPFLK 33 (528)
T ss_dssp HHHHHHHHHTTCCEEE-ECCC-GGGHHHHT
T ss_pred HHHHHHHHHCCCCEEE-EECC-CCHHHHHH
T ss_conf 9999999977999899-9788-35799999
No 42
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=75.44 E-value=3.7 Score=19.23 Aligned_cols=58 Identities=21% Similarity=0.302 Sum_probs=37.0
Q ss_pred ECCCCCHH-CCCCC----CCCHHHHHHC--CCE-EEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 01247010-24677----8400112203--405-874267889999999999999997389739986421
Q gi|254781051|r 414 GFTTNPSS-ARSCT----YASDISKSIG--IPI-FHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCY 475 (957)
Q Consensus 414 GFTT~p~d-~RSs~----Y~TDiAK~i~--aPI-~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~Y 475 (957)
|+||||.- .|+.. +..++.+.+. -|| +-|-++|+|.-+.-++- +. ++..+|+|-+=+-
T Consensus 24 GvTTNPsll~k~~~~~~~~~~~i~~~~~~~~~vs~ev~~~~~~~mi~~A~~---l~-~~~~ni~vKIP~t 89 (220)
T 1l6w_A 24 GVTTNPSIIAAGKKPLDVVLPQLHEAMGGQGRLFAQVMATTAEGMVNDALK---LR-SIIADIVVKVPVT 89 (220)
T ss_dssp EEECCHHHHHHHCSCHHHHHHHHHHHTTTCSEEEEECCCSSHHHHHHHHHH---HH-HHSTTCEEEEECS
T ss_pred EEECCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHH---HH-HHCCCCEEEEECC
T ss_conf 780488999866999999999999980989968999973767778999999---99-7286758995062
No 43
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=75.23 E-value=3.8 Score=19.19 Aligned_cols=17 Identities=6% Similarity=0.108 Sum_probs=8.2
Q ss_pred EECCCHHHHHHHHHHHH
Q ss_conf 72488999999999974
Q gi|254781051|r 762 ANCTSPANYFHILRRQI 778 (957)
Q Consensus 762 ~~~ttpAq~FH~LRRQ~ 778 (957)
...+++.++--+|++.+
T Consensus 502 ~~v~~~~el~~al~~a~ 518 (552)
T 1ovm_A 502 WRVSEAEQLADVLEKVA 518 (552)
T ss_dssp EEECBHHHHHHHHHHHT
T ss_pred EEECCHHHHHHHHHHHH
T ss_conf 98279999999999998
No 44
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=74.10 E-value=4 Score=19.00 Aligned_cols=38 Identities=24% Similarity=0.255 Sum_probs=27.2
Q ss_pred HHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 8875214378269724889999999999743534886898
Q gi|254781051|r 749 RFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIM 788 (957)
Q Consensus 749 RfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv 788 (957)
+|-.||.--.+.-..++|+..+=.+|.+-+. ..+|-+|
T Consensus 501 d~~~la~a~G~~~~~v~~~~el~~al~~a~~--~~~p~li 538 (564)
T 2q28_A 501 RYDKLMDAFRGVGYNVTTTDELRHALTTGIQ--SRKPTII 538 (564)
T ss_dssp CGGGGGGGGTCEEEEECSHHHHHHHHHHHHH--HTSCEEE
T ss_pred CHHHHHHHCCCEEEEECCHHHHHHHHHHHHH--CCCCEEE
T ss_conf 9999999789979996889999999999983--8993999
No 45
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=73.81 E-value=4.1 Score=18.95 Aligned_cols=88 Identities=11% Similarity=0.054 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEE
Q ss_conf 99999999987379107998067655268999885379899999855887432234555100150268898359618999
Q gi|254781051|r 248 PAIEEIIRQGVQQGVDEMILGMAHRGRLNVLSQIMNKLPRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNRQICGKDVKLL 327 (957)
Q Consensus 248 P~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL~Nvl~Kp~~~iF~EF~g~~~~~~~~sGDVKYHLG~s~~~~~~g~~v~ls 327 (957)
+.=|.|++.-...||+.|+ |.+= +|-.=|..-|.+... |+-....+ + .+=+=.=+||+. ..|+.+ +-
T Consensus 5 t~~~~i~~~L~~~Gv~~vf-g~pG-~~~~~l~~al~~~~~-----i~~~~~~~-E-~~Aaf~A~G~ar---~tg~~v-v~ 71 (563)
T 2vk8_A 5 TLGKYLFERLKQVNVNTVF-GLPG-DFNLSLLDKIYEVEG-----MRWAGNAN-E-LNAAYAADGYAR---IKGMSC-II 71 (563)
T ss_dssp EHHHHHHHHHHHTTCCEEE-ECCC-GGGHHHHHGGGGSTT-----CEECCCSS-H-HHHHHHHHHHHH---HHSCEE-EE
T ss_pred CHHHHHHHHHHHCCCCEEE-EECC-CCHHHHHHHHHHCCC-----CEEEEECC-H-HHHHHHHHHHHH---HHCCEE-EE
T ss_conf 9999999999987999999-9789-256999999873599-----86982387-8-999999999999---869969-99
Q ss_pred ECCCCCCCHHCCHHHHHHHHHHHHH
Q ss_conf 7178773100044553236777764
Q gi|254781051|r 328 LQSNPSHLEFVDPVVIGSVRARQDL 352 (957)
Q Consensus 328 L~~NPSHLEaVnPVv~G~~RAkQd~ 352 (957)
+..-|- +.-.+-|.+-|..++
T Consensus 72 ~tsGpg----~~N~~~av~eA~~~~ 92 (563)
T 2vk8_A 72 TTFGVG----ELSALNGIAGSYAEH 92 (563)
T ss_dssp EETTHH----HHHHHHHHHHHHHHT
T ss_pred EECCHH----HHHHHHHHHHHHHHC
T ss_conf 916737----998999999998658
No 46
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=69.82 E-value=1.5 Score=22.11 Aligned_cols=24 Identities=8% Similarity=0.126 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 9999999999999997389739986421
Q gi|254781051|r 448 EAVIRVVRMAVSFRMKFHKSVVIDIVCY 475 (957)
Q Consensus 448 Eav~~~~~lA~~yR~~F~kDVvIDlv~Y 475 (957)
+.+-++..+|. +.+=-|+||+-..
T Consensus 65 ~~ld~~v~~a~----~~Gi~Vildlh~~ 88 (302)
T 1bqc_A 65 SDVANVISLCK----QNRLICMLEVHDT 88 (302)
T ss_dssp HHHHHHHHHHH----HTTCEEEEEEGGG
T ss_pred HHHHHHHHHHH----HCCCEEEEEECCC
T ss_conf 99999999999----8799899984353
No 47
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 1zpd_A*
Probab=69.00 E-value=5.1 Score=18.19 Aligned_cols=16 Identities=19% Similarity=0.208 Sum_probs=8.1
Q ss_pred HHHHHHHHHCCCCEEE
Q ss_conf 9999998737910799
Q gi|254781051|r 251 EEIIRQGVQQGVDEMI 266 (957)
Q Consensus 251 ~~ii~~a~~~Gv~eiv 266 (957)
+.|++.-.+.||+.|+
T Consensus 7 ~~l~~~L~~~Gv~~vf 22 (568)
T 2wvg_A 7 TYLAERLVQIGLKHHF 22 (568)
T ss_dssp HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHCCCCEEE
T ss_conf 9999999987999999
No 48
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=66.42 E-value=5.7 Score=17.83 Aligned_cols=14 Identities=7% Similarity=0.050 Sum_probs=7.5
Q ss_pred CCCHHHHHHHHHHH
Q ss_conf 48899999999997
Q gi|254781051|r 764 CTSPANYFHILRRQ 777 (957)
Q Consensus 764 ~ttpAq~FH~LRRQ 777 (957)
|-+|...++.|++-
T Consensus 376 pi~~~~l~~~l~~~ 389 (570)
T 2vbf_A 376 PLSQDRLWQAVESL 389 (570)
T ss_dssp BCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
T ss_conf 87999999999864
No 49
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=65.24 E-value=6 Score=17.67 Aligned_cols=40 Identities=18% Similarity=0.342 Sum_probs=24.8
Q ss_pred CHHHHHHCCCEEEEC-CCC-HHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 001122034058742-678-89999999999999997389739986
Q gi|254781051|r 429 SDISKSIGIPIFHVN-GDD-PEAVIRVVRMAVSFRMKFHKSVVIDI 472 (957)
Q Consensus 429 TDiAK~i~aPI~HVN-~Dd-pEav~~~~~lA~~yR~~F~kDVvIDl 472 (957)
..+++-+-.+.+.|+ .++ |+.+-+|.+.|..- +.-|.|++
T Consensus 125 ~~~~~~~~k~~~~v~~~~~~~~~i~~A~~~a~~~----~gPv~i~i 166 (566)
T 2vbi_A 125 LEMARQVTCAAESITDAHSAPAKIDHVIRTALRE----RKPAYLDI 166 (566)
T ss_dssp HHHHHTTCSEEEEECSSSSHHHHHHHHHHHHHHH----TCCEEEEE
T ss_pred HHHHHHEEEEEEEECCHHHHHHHHHHHHHHHCCC----CCCEEEEE
T ss_conf 7553101467876346434589999999974457----88649960
No 50
>2zzd_B Thiocyanate hydrolase subunit beta; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dd4_B 2dxb_B 2dd5_B* 2dxc_B*
Probab=60.28 E-value=6.6 Score=17.36 Aligned_cols=97 Identities=14% Similarity=0.093 Sum_probs=60.7
Q ss_pred CCHHHHHHCCCEEEEC--CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHH
Q ss_conf 4001122034058742--67889999999999999997389739986421125656435422355788888671899899
Q gi|254781051|r 428 ASDISKSIGIPIFHVN--GDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPSFTQPMMYKTIRSHKSVLQ 505 (957)
Q Consensus 428 ~TDiAK~i~aPI~HVN--~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~fTQP~mY~~I~~hp~v~~ 505 (957)
|-|++-.-..||--.. -.+=|.-++|.-+|+.+|-.|.-|- .||..-++++ |..|-...=-.--..
T Consensus 47 ~HDlGG~~~gPv~~e~~~~~~WE~rv~Al~~aL~~~G~wn~DE------~R~a~E~~l~------~a~Yl~~sYYerWl~ 114 (157)
T 2zzd_B 47 PHDVGGEADVPIEYHEKEEEIWELNTFATCECLAWRGVWTAEE------RRRKQNCDVG------QTVYLGMPYYGRWLL 114 (157)
T ss_dssp TTCCTTCCCCCCCCCEECCBHHHHHHHHHHHHHHHTTSCCHHH------HHHHHHTTTC------HHHHHHSCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHH------HHHHHHHCCC------HHHHHCCCHHHHHHH
T ss_conf 7567899999989887883218999999999986559998899------9999871279------999725985999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999986448989899999999999997756
Q gi|254781051|r 506 LYADSLMKNQVISKQELQSLANNWHKYLEAE 536 (957)
Q Consensus 506 ~Y~~~Li~~g~it~~e~~~~~~~~~~~l~~~ 536 (957)
-...-|++.|+||.+|++.-.+++++.+...
T Consensus 115 ale~lLvekG~it~~EL~~r~~evr~R~~~~ 145 (157)
T 2zzd_B 115 TAARILVDKQFVTLTELHNKIVEMRERVASG 145 (157)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 9999999959989999999999999986357
No 51
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=59.83 E-value=4.6 Score=18.55 Aligned_cols=32 Identities=16% Similarity=0.183 Sum_probs=30.0
Q ss_pred CCCCHHHHHHHCCCCCEEEEECCCHHHHHHHH
Q ss_conf 64405788752143782697248899999999
Q gi|254781051|r 743 SSARLERFLQMCAENNMYVANCTSPANYFHIL 774 (957)
Q Consensus 743 SSaRlERfLQl~a~~N~~V~~~ttpAq~FH~L 774 (957)
|++||||.-++.++.|+-.+..|.|+|+|-+.
T Consensus 1 ~~~Rl~rlr~~m~~~~lD~~li~~~~ni~Ylt 32 (132)
T 3o5v_A 1 SNAKLDQIRLYLDQKGAELAIFSDPVTINYLT 32 (132)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEECCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCHHHHCCCC
T ss_conf 96899999999998699999990541302302
No 52
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=57.91 E-value=7.9 Score=16.76 Aligned_cols=110 Identities=17% Similarity=0.186 Sum_probs=65.9
Q ss_pred ECCCCCHH-CCCCC----CCCHHHHHHCCCE-EEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECC----------C
Q ss_conf 01247010-24677----8400112203405-8742678899999999999999973897399864211----------2
Q gi|254781051|r 414 GFTTNPSS-ARSCT----YASDISKSIGIPI-FHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYR----------R 477 (957)
Q Consensus 414 GFTT~p~d-~RSs~----Y~TDiAK~i~aPI-~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YR----------r 477 (957)
|+||||.- .|+.. +..+|.+....|+ +.|.+||+|..+..++.- ....++|+|-+=+-. .
T Consensus 36 GvTTNPsll~k~g~~~~~~~k~i~~~~~~~~s~ev~~~~~~em~~~a~~i----~~~~~nv~VKIP~t~~gl~ai~~L~~ 111 (230)
T 1vpx_A 36 GVTTNPTLISKEGAEFKQRVKEICDLVKGPVSAEVVSLDYEGMVREAREL----AQISEYVVIKIPMTPDGIKAVKTLSA 111 (230)
T ss_dssp EEECCC-----------CHHHHHHHHHCSCEEEECSCCSHHHHHHHHHHH----HTTCTTEEEEEESSHHHHHHHHHHHH
T ss_pred EECCCHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH----HCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 48308899987499989999999974477641675487789889999998----60487618980574778999999605
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 56564354223557888886718998999999986448989899999999
Q gi|254781051|r 478 FGHNEGDEPSFTQPMMYKTIRSHKSVLQLYADSLMKNQVISKQELQSLAN 527 (957)
Q Consensus 478 ~GHNE~DeP~fTQP~mY~~I~~hp~v~~~Y~~~Li~~g~it~~e~~~~~~ 527 (957)
.|-+-.=---||....+.....-.+....|..++-..|.=..+.+.++.+
T Consensus 112 ~Gi~~n~Tavfs~~Qa~~Aa~aga~yispf~gR~~d~g~d~~~~i~~~~~ 161 (230)
T 1vpx_A 112 EGIKTNVTLVFSPAQAILAAKAGATYVSPFVGRMDDLSNDGMRMLGEIVE 161 (230)
T ss_dssp TTCCEEEEEECSHHHHHHHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHH
T ss_pred CCCCEEEEEECCHHHHHHHHHCCCCEEEEEEEEHHCCCCCCHHHHHHHHH
T ss_conf 39956887506789999998648954877751011146776166999999
No 53
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=54.95 E-value=5.4 Score=17.98 Aligned_cols=42 Identities=10% Similarity=-0.024 Sum_probs=24.3
Q ss_pred CCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 681354368888888765644057887521437826972488
Q gi|254781051|r 725 SNLVCLLPHGYEGQGPEHSSARLERFLQMCAENNMYVANCTS 766 (957)
Q Consensus 725 sglvllLPHGyeGqGPEHSSaRlERfLQl~a~~N~~V~~~tt 766 (957)
+.=||.|.||+.|-.-+.+=.+..+-.|+.++.+|.||.|..
T Consensus 28 ~~p~lyLlhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~g 69 (280)
T 1dqz_A 28 GPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVG 69 (280)
T ss_dssp SSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECC
T ss_pred CCCEEEECCCCCCCCCCCHHHHCCCHHHHHHHCCCEEEEECC
T ss_conf 998899828999888733244367499999738988999789
No 54
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=52.61 E-value=9.5 Score=16.15 Aligned_cols=93 Identities=19% Similarity=0.277 Sum_probs=60.0
Q ss_pred EEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCC-----CCH---HHHHHCCCEEEECC
Q ss_conf 8862575333467258876451067744365799984160201247010246778-----400---11220340587426
Q gi|254781051|r 373 LIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTY-----ASD---ISKSIGIPIFHVNG 444 (957)
Q Consensus 373 iliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y-----~TD---iAK~i~aPI~HVN~ 444 (957)
|+|||= .|.+..+.-.......+| |||+=++.||--+......+.| +-| +.+.++..=+|+=|
T Consensus 41 lllHG~---~~~~~~~~~~~~~~~~~~------~via~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~~~~l~~~~~~lvG 111 (317)
T 1wm1_A 41 VFIHGG---PGGGISPHHRQLFDPERY------KVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFG 111 (317)
T ss_dssp EEECCT---TTCCCCGGGGGGSCTTTE------EEEEECCTTSTTCBSTTCCTTCSHHHHHHHHHHHHHHTTCSSEEEEE
T ss_pred EEECCC---CCCCCCHHHHHHHCCCCC------EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 998999---977426466787602799------89999689987888777644343999999999988731788348883
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 7889999999999999997389739986421
Q gi|254781051|r 445 DDPEAVIRVVRMAVSFRMKFHKSVVIDIVCY 475 (957)
Q Consensus 445 DdpEav~~~~~lA~~yR~~F~kDVvIDlv~Y 475 (957)
-+-=+.+ ++.+|..|..++.+-|.++...-
T Consensus 112 hS~Gg~~-a~~~a~~~p~~v~~~v~~~~~~~ 141 (317)
T 1wm1_A 112 GSWGSTL-ALAYAQTHPERVSEMVLRGIFTL 141 (317)
T ss_dssp ETHHHHH-HHHHHHHCGGGEEEEEEESCCCC
T ss_pred CCCCHHH-HHHHHHHHHHHHEEEEEECCCCC
T ss_conf 0576357-99999987653102355234445
No 55
>1ug7_A 2610208M17RIK protein; hypothetical protein FLJ12806, four helical UP-and-DOWN bundle, structural genomics; NMR {Mus musculus} SCOP: a.24.24.1
Probab=52.41 E-value=9.6 Score=16.13 Aligned_cols=65 Identities=12% Similarity=0.180 Sum_probs=51.1
Q ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHH
Q ss_conf 999984145778887988999999999999989999986403362222564658999999999998
Q gi|254781051|r 192 WVRNTIEDYDFSSNFSKEEQRDILDKLVRAEGFEKFIDIKYKGAKRFGADGSEVIIPAIEEIIRQG 257 (957)
Q Consensus 192 Wlq~riE~~~~~~~~s~eeK~~iL~~L~~Ae~FE~FL~~Kf~g~KRFsLEG~EslIP~L~~ii~~a 257 (957)
-|+...-+..+.+.|+.++||.|++--+-.|.=-.=|+. =.++--|.||----|+|.|..|+...
T Consensus 48 ~L~k~~~~~~~~~~FTEdqKK~l~kIAtCLelRS~aLQ~-t~s~~~~~ledlKkL~~iLknll~~~ 112 (128)
T 1ug7_A 48 HLQKEAQAQHNNSEFTEEQKKTIGKIATCLELRSAALQS-TQSQEEFKLEDLKKLEPILKNILTYN 112 (128)
T ss_dssp HHHHHHTCSSSCCSSCHHHHHHHHHHHHHHHHHHHHHHC-CSCCCSCCSHHHHTHHHHHHTTTTCC
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 999987123468863199999999999999999998634-23567757999998999999773028
No 56
>3fmc_A Putative succinylglutamate desuccinylase / aspartoacylase; YP_926482.1, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Shewanella amazonensis SB2B} PDB: 3lwu_A*
Probab=50.84 E-value=8.5 Score=16.51 Aligned_cols=65 Identities=17% Similarity=0.320 Sum_probs=43.2
Q ss_pred EEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEE-ECCCEECCCCCHHC---CCCC-CCCHHHHHHC
Q ss_conf 0478886257533346725887645106774436579998-41602012470102---4677-8400112203
Q gi|254781051|r 369 RVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLI-INNQIGFTTNPSSA---RSCT-YASDISKSIG 436 (957)
Q Consensus 369 ~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiV-vNNQIGFTT~p~d~---RSs~-Y~TDiAK~i~ 436 (957)
-.+-=-|||| -++|.=++.+.+. .|.....-|||-|| +=|-.||-...+.. |.++ .-+|+-+++-
T Consensus 36 v~i~agiHGd-E~~g~~~~~~L~~--~l~~~~l~G~v~ivP~~Np~g~~~~~r~~~~~r~~~~d~~dlNR~FP 105 (368)
T 3fmc_A 36 VYIQANVHGA-EVQGNAVIYQLMK--LLEHYELLGDISLVPLANPLGINQKSGEFTLGRFDPITGVNWNREYL 105 (368)
T ss_dssp EEEEECSSTT-CTHHHHHHHHHHH--HHTTSCBSSCEEEECSCCHHHHTCEETTEECCSBCTTTCCBGGGCCC
T ss_pred EEEECCCCCC-CHHHHHHHHHHHH--HHHHHHCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9998786746-1889999999998--52453048509998546889996164657677768799996677888
No 57
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens str}
Probab=48.89 E-value=11 Score=15.74 Aligned_cols=85 Identities=9% Similarity=0.084 Sum_probs=53.5
Q ss_pred CCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCCEEEECC-
Q ss_conf 4540478886257533346725887645106774436579998416020124701024677840011220340587426-
Q gi|254781051|r 366 ERSRVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIPIFHVNG- 444 (957)
Q Consensus 366 ~~~~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aPI~HVN~- 444 (957)
..-+-|-|||=|=.-|.|+-++-+-+. .||.+++++|-|+. +.. +++..+ ......+--|.+
T Consensus 10 ~~~~~MkVLVTGatGfIG~~l~~~Ll~----~G~~~~~~~~~v~~----~d~-----~~~~~~----~~~~~~~~~~~~D 72 (342)
T 2hrz_A 10 LYFQGMHIAIIGAAGMVGRKLTQRLVK----DGSLGGKPVEKFTL----IDV-----FQPEAP----AGFSGAVDARAAD 72 (342)
T ss_dssp SCCSCEEEEEETTTSHHHHHHHHHHHH----HCEETTEEEEEEEE----EES-----SCCCCC----TTCCSEEEEEECC
T ss_pred HHHCCCEEEEECCCCHHHHHHHHHHHH----CCCCCCCCCEEEEE----EEC-----CCCCCH----HHCCCCCEEEECC
T ss_conf 464799899989987899999999997----79966676307999----826-----877662----2435686599830
Q ss_pred -CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf -7889999999999999997389739986421
Q gi|254781051|r 445 -DDPEAVIRVVRMAVSFRMKFHKSVVIDIVCY 475 (957)
Q Consensus 445 -DdpEav~~~~~lA~~yR~~F~kDVvIDlv~Y 475 (957)
.|++++..+.+ -+.|+||.+-..
T Consensus 73 l~~~~~~~~~~~--------~~~d~ViHlAa~ 96 (342)
T 2hrz_A 73 LSAPGEAEKLVE--------ARPDVIFHLAAI 96 (342)
T ss_dssp TTSTTHHHHHHH--------TCCSEEEECCCC
T ss_pred CCCHHHHHHHHH--------CCCCEEEECCCE
T ss_conf 799899999983--------499999843522
No 58
>1xrs_A D-lysine 5,6-aminomutase alpha subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'- deoxyadenosine, radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.1.19.4
Probab=45.63 E-value=12 Score=15.39 Aligned_cols=49 Identities=16% Similarity=0.271 Sum_probs=28.1
Q ss_pred ECCCCHHHH-HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH---CCCHHHHHHHH
Q ss_conf 225646589-999999999987379107998067655268999885---37989999985
Q gi|254781051|r 238 FGADGSEVI-IPAIEEIIRQGVQQGVDEMILGMAHRGRLNVLSQIM---NKLPRSIFYEF 293 (957)
Q Consensus 238 FsLEG~Esl-IP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL~Nvl---~Kp~~~iF~EF 293 (957)
||++|.+.- +|+-..+++.--+.| .-.+|-.--+.|-| |+.+.+|-.+.
T Consensus 46 ~Gidg~d~~~vPl~N~vVd~l~~~~-------~l~~G~a~~~~nAm~~~g~~pq~iae~~ 98 (516)
T 1xrs_A 46 LGIDGVDTDEVPLPNIVVDHIKENN-------GLNLGAAMYIANAVLNTGKTPQEIAQAI 98 (516)
T ss_dssp TTCCSBCTTSCBHHHHHHHHHHHTT-------CTTTCHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HCCCCCCCCCCCCCHHHHHHHHHCC-------CCCCCHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 3877889778967189999999617-------6211559999999986399989999999
No 59
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein structure initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=45.36 E-value=12 Score=15.36 Aligned_cols=151 Identities=14% Similarity=0.171 Sum_probs=74.1
Q ss_pred HHHHHHHHHHCCCHHH---CCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHH---C
Q ss_conf 9999999988170454---016777777667877678766699978817157256657877778999999999840---6
Q gi|254781051|r 101 VMKMIDAYRSYGHFKA---NIDPLGYNSHQKDLSELSPAHYGFVKADYDRKICMKGVLGLESATIPEIVDVLSHLY---C 174 (957)
Q Consensus 101 V~~LI~AYR~~GHl~A---~lDPLgl~~~~~~~peL~~~~yGLse~DLd~~f~~~~~~g~~~~tL~eIi~~L~~tY---C 174 (957)
...+++.+|..||-.- -..|++. +..+|.-..|. ..++-.++..+|+... -
T Consensus 68 ~~~~a~~ar~~G~EvllhlPMep~~~-------~~~~~gp~~L~----------------~~~~~~~i~~~l~~~l~~vP 124 (261)
T 2qv5_A 68 LQRWMQDARREGHEILLQIPLEPFGY-------PGTNPGPDTLL----------------AGDPAKVNIDRLHRSMAKIT 124 (261)
T ss_dssp HHHHHHHHHHHTCCEEEEEEECCTTT-------TTSCCCTTCBC----------------TTSCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCC-------CCCCCCCCCCC----------------CCCCHHHHHHHHHHHHHHCC
T ss_conf 79999999977987999766676688-------87888855456----------------67889999999999998698
Q ss_pred CCEEEEEECC-----CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE--CCCCHHHHH
Q ss_conf 4302777248-----998999999998414577888798899999999999998999998640336222--256465899
Q gi|254781051|r 175 SNIGVEFMHI-----VDSIERDWVRNTIEDYDFSSNFSKEEQRDILDKLVRAEGFEKFIDIKYKGAKRF--GADGSEVII 247 (957)
Q Consensus 175 gsIGvEymHI-----~d~eer~Wlq~riE~~~~~~~~s~eeK~~iL~~L~~Ae~FE~FL~~Kf~g~KRF--sLEG~EslI 247 (957)
+-+|+ -.|. .|.+--.|+-+.+.....-.-=|....+....++.+.. ...|..--+| .-..-+++.
T Consensus 125 ~avGv-nNhmGS~~t~~~~~m~~v~~~l~~~gL~fvDS~T~~~Sva~~~A~~~------gvp~~~rdvfLD~~~~~~~I~ 197 (261)
T 2qv5_A 125 NYTGV-MNYLGGRFLAEQSALEPVMRDIGKRGLLFLDDGSSAQSLSGGIAKAI------SAPQGFADVLLDGEVTEASIL 197 (261)
T ss_dssp CCSEE-EEEECTTGGGCHHHHHHHHHHHHHTTCEEEECSCCTTCCHHHHHHHH------TCCEEECSEETTSSCSHHHHH
T ss_pred CEEEE-ECCCCCHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHC------CCCEEEECEECCCCCCHHHHH
T ss_conf 62998-34655201269899999999998779889946998774899999975------998654024258999999999
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
Q ss_conf 99999999987379107998067655268999885
Q gi|254781051|r 248 PAIEEIIRQGVQQGVDEMILGMAHRGRLNVLSQIM 282 (957)
Q Consensus 248 P~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL~Nvl 282 (957)
--|+.++..|...|. -|+||=+|-.-|.+|.+.+
T Consensus 198 ~ql~~~~~~A~~~G~-aI~Ighp~p~Tl~~L~~w~ 231 (261)
T 2qv5_A 198 RKLDDLERIARRNGQ-AIGVASAFDESIAAISKWS 231 (261)
T ss_dssp HHHHHHHHHHHHHSE-EEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCC-EEEEECCCHHHHHHHHHHH
T ss_conf 999999999987595-8999789989999999971
No 60
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=45.30 E-value=8.9 Score=16.37 Aligned_cols=32 Identities=9% Similarity=0.119 Sum_probs=22.1
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 88999999999999999738973998642112
Q gi|254781051|r 446 DPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRR 477 (957)
Q Consensus 446 dpEav~~~~~lA~~yR~~F~kDVvIDlv~YRr 477 (957)
+|++......=+++.=.+.+-=|+||+-.+..
T Consensus 74 ~~~~~~~~ld~~v~~a~~~gi~Vild~h~~~~ 105 (306)
T 2cks_A 74 NPRGFTDRMHQLIDMATARGLYVIVDWHILTP 105 (306)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEEECCSS
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
T ss_conf 83899999999999999878954203555686
No 61
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=41.48 E-value=11 Score=15.72 Aligned_cols=41 Identities=7% Similarity=0.048 Sum_probs=19.8
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 999999853799839980678531784578997699998750
Q gi|254781051|r 877 DYLIKVLSRFVQAEIVWCQEEPQNMGAWTFIEPYLEKVLHSI 918 (957)
Q Consensus 877 ~~l~~~l~~y~~~e~vW~QEEp~N~GaW~~v~~rl~~~l~~~ 918 (957)
..+.+.|..--....++.-.++-+ =.|.|-+.+|...++.+
T Consensus 239 ~~l~~~l~~~g~~~~~~~~~~~G~-H~W~~W~~~l~~~l~~l 279 (304)
T 1sfr_A 239 IKFQDAYNAGGGHNGVFDFPDSGT-HSWEYWGAQLNAMKPDL 279 (304)
T ss_dssp HHHHHHHHHTTCCSEEEECCSCCC-SSHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHCCCCCEEEEECCCCE-ECHHHHHHHHHHHHHHH
T ss_conf 999999997799838999569973-67467999999999999
No 62
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=40.62 E-value=14 Score=14.85 Aligned_cols=112 Identities=14% Similarity=0.242 Sum_probs=61.8
Q ss_pred EEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEE-EEEECCCEECCCCCHHCCCCCCCCHHHHHHCCCEEEECCCCH
Q ss_conf 0478886257533346725887645106774436579-998416020124701024677840011220340587426788
Q gi|254781051|r 369 RVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNI-HLIINNQIGFTTNPSSARSCTYASDISKSIGIPIFHVNGDDP 447 (957)
Q Consensus 369 ~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTi-HiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aPI~HVN~Ddp 447 (957)
.=+.|++ ||.|-..+.|--+.... ...-| =||+||. ++ ..+.|+-.+.|++++|-.+-
T Consensus 13 ~riavl~------SG~Gsnl~aLi~~~~~~--~~~~iv~vi~~~~---------~~----~~~~A~~~gIp~~~i~~~~~ 71 (215)
T 3da8_A 13 ARLVVLA------SGTGSLLRSLLDAAVGD--YPARVVAVGVDRE---------CR----AAEIAAEASVPVFTVRLADH 71 (215)
T ss_dssp EEEEEEE------SSCCHHHHHHHHHSSTT--CSEEEEEEEESSC---------CH----HHHHHHHTTCCEEECCGGGS
T ss_pred CEEEEEE------CCCCHHHHHHHHHHCCC--CCCEEEEEEECCC---------HH----HHHHHHHCCCCEEEEECCCC
T ss_conf 8899998------36826599999963779--9977999996785---------66----88999983997377405788
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH
Q ss_conf 999999999999999738973998642112565643542235578888867189989999
Q gi|254781051|r 448 EAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPSFTQPMMYKTIRSHKSVLQLY 507 (957)
Q Consensus 448 Eav~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~DeP~fTQP~mY~~I~~hp~v~~~Y 507 (957)
+.--.--+--++.=.+|+-|+++ +++|.+.=..+ |-+-..|..|.-||+.+-.|
T Consensus 72 ~~r~~~~~~l~~~l~~~~~Dliv-~~g~~~il~~~-----~l~~~~~~~iN~HpslLP~~ 125 (215)
T 3da8_A 72 PSRDAWDVAITAATAAHEPDLVV-SAGFMRILGPQ-----FLSRFYGRTLNTHPALLPAF 125 (215)
T ss_dssp SSHHHHHHHHHHHHHTTCCSEEE-EEECCSCCCHH-----HHHHHTTTEEEEESSCTTSS
T ss_pred CCHHHHHHHHHHHHHHCCCCEEE-ECCHHHHCCHH-----HHHHHCCCCCCCCCCCCCCC
T ss_conf 99999999999998760999999-84613346888-----86422048750788879888
No 63
>2it2_A UPF0130 protein PH1069; hypothetical protein, NPPSFA, national project on protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2drv_A 2it3_A
Probab=40.47 E-value=14 Score=14.84 Aligned_cols=72 Identities=24% Similarity=0.242 Sum_probs=42.8
Q ss_pred HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEE------EEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHH
Q ss_conf 11220340587426788999999999999999738973998------642112565643542235578888867189989
Q gi|254781051|r 431 ISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVID------IVCYRRFGHNEGDEPSFTQPMMYKTIRSHKSVL 504 (957)
Q Consensus 431 iAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvID------lv~YRr~GHNE~DeP~fTQP~mY~~I~~hp~v~ 504 (957)
+--.++.||+||.+-|.|+.....++|.+ .-|+.-=++- +|+-|= -.-+|-|-..+ .+.-|.
T Consensus 99 l~lk~ep~ILHV~cr~le~A~~Ll~~A~~--~GFr~SGI~s~~~~r~iVaIrs--~~~le~Pl~~~--------g~~lV~ 166 (200)
T 2it2_A 99 LWFLVRSPILHVGAKTLEDAVKLVNLAVS--CGFKYSNIKSISNKKLIVEIRS--TERMDVLLGEN--------GEIFVG 166 (200)
T ss_dssp EEEEEECCEEEEEESSHHHHHHHHHHHHH--TTCTTCEEECC----CEEEEEC--SCCEEEEEEET--------TEECCC
T ss_pred EEEEECCCEEEEEECCHHHHHHHHHHHHH--CCCHHHCCEECCCCCEEEEEEC--CCCEEEEEEEC--------CEECCC
T ss_conf 79994097988874889999999999997--3831316363489847999933--78543576329--------906379
Q ss_pred HHHHHHHHHC
Q ss_conf 9999998644
Q gi|254781051|r 505 QLYADSLMKN 514 (957)
Q Consensus 505 ~~Y~~~Li~~ 514 (957)
+-|-+.|++.
T Consensus 167 ~eyL~~lv~~ 176 (200)
T 2it2_A 167 EEYLNKIVEI 176 (200)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 64
>1l1s_A Hypothetical protein MTH1491; structural genomics, PSI, protein structure initiative; 2.30A {Methanothermobacterthermautotrophicus} SCOP: c.114.1.1
Probab=39.70 E-value=15 Score=14.75 Aligned_cols=37 Identities=27% Similarity=0.566 Sum_probs=28.7
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf 58742678899999999999999973897399864211
Q gi|254781051|r 439 IFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYR 476 (957)
Q Consensus 439 I~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YR 476 (957)
|||||.+||+..-.+..-+..+.+.+ .++-|-+|.+-
T Consensus 7 vf~i~~~d~~~~~~~l~~~~nl~~~~-~~~~i~vV~~G 43 (113)
T 1l1s_A 7 VFHIDEDDESRVLLLISNVRNLMADL-ESVRIEVVAYS 43 (113)
T ss_dssp EEEECCCCHHHHHHHHHHHHHHHHHC-SSEEEEEEECG
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHCC-CCCEEEEEEEC
T ss_conf 99955999899999999999998437-88749999954
No 65
>1k0e_A P-aminobenzoate synthase component I; aminodeoxychorismate synthase, chorismate, glutamine, tryptophan, PABA synthase, lyase; HET: TRP; 2.00A {Escherichia coli} SCOP: d.161.1.1 PDB: 1k0g_A*
Probab=39.57 E-value=4.1 Score=18.88 Aligned_cols=26 Identities=8% Similarity=-0.086 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 58999999999998737910799806
Q gi|254781051|r 244 EVIIPAIEEIIRQGVQQGVDEMILGM 269 (957)
Q Consensus 244 EslIP~L~~ii~~a~~~Gv~eiviGM 269 (957)
|.-.-+++.+++.-....+..||+.-
T Consensus 191 ~~y~~~V~~~~~~I~~Gd~~qvvls~ 216 (453)
T 1k0e_A 191 EQYGEKFRQVQEYLHSGDCYQVNLAQ 216 (453)
T ss_dssp HHHHHHHHHHHHHHHTTSCSCEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCE
T ss_conf 99999999999999769847997313
No 66
>2fb0_A Conserved hypothetical protein; SAD, structural genomics, PSI, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482}
Probab=39.37 E-value=5.1 Score=18.22 Aligned_cols=28 Identities=18% Similarity=0.217 Sum_probs=23.2
Q ss_pred CCCCCCCHHHHHHCCCCCCCCCCEEECC
Q ss_conf 4311110134320221138653111000
Q gi|254781051|r 670 SFLSEQAVLGFEYGYSLNNLNALTIWEA 697 (957)
Q Consensus 670 S~LSE~avlgFEyGys~~~p~~L~iWEA 697 (957)
....|-|++.|+...+.++|+.+++||-
T Consensus 31 ~tr~E~Gcl~y~~~~d~~~p~~~~~~E~ 58 (94)
T 2fb0_A 31 CSLKEEGCIAYDTFESSTRRDVFMICET 58 (94)
T ss_dssp HHTTSTTEEEEEEEECSSCTTEEEEEEE
T ss_pred HHHCCCCCEEEEEEECCCCCCEEEEEEE
T ss_conf 9954999499999974899988999999
No 67
>3h9m_A P-aminobenzoate synthetase, component I; para-aminobenzoate synthetase, cytophaga hutchinsonii,YP_678417.1, CHU_1808; HET: PGE; 1.57A {Cytophaga hutchinsonii atcc 33406}
Probab=39.16 E-value=3.6 Score=19.37 Aligned_cols=78 Identities=19% Similarity=0.210 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCC--CCCCCCCCCCCEEEEEEE
Q ss_conf 465899999999999873791079980676552689998853798999998558874322--345551001502688983
Q gi|254781051|r 242 GSEVIIPAIEEIIRQGVQQGVDEMILGMAHRGRLNVLSQIMNKLPRSIFYEFKGKGPSEK--EYSGDVKYHLGLCCNRQI 319 (957)
Q Consensus 242 G~EslIP~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL~Nvl~Kp~~~iF~EF~g~~~~~~--~~sGDVKYHLG~s~~~~~ 319 (957)
.-|.-+-+++.+++.-....+.+||+...-.-+. ...+..+|....-..|... ....+..+=+|.|-++-.
T Consensus 161 sk~~Y~~~V~~~~~~I~~Gd~~kvvlsr~~~~~~-------~~dp~~l~~~L~~~~p~~y~~~~~~~~~~~igaSPE~Ll 233 (436)
T 3h9m_A 161 SKESYFNAFDELQQIIAQGDAYEINYCIPFTAKG-------NISPAATYQRLNKKTPMPFSVYYKFNTEYILSASPERFI 233 (436)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCSEEEEEEEEEEEC-------CCCHHHHHHHHHHHSCCTTEEEEEETTEEEEECCCCEEE
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCC-------CCCHHHHHHHHHHHCCCCEEEEECCCCCEEECCCHHHHE
T ss_conf 9999999999999999859949999886356789-------999999999999778985245442787569716978956
Q ss_pred --CCCEEEE
Q ss_conf --5961899
Q gi|254781051|r 320 --CGKDVKL 326 (957)
Q Consensus 320 --~g~~v~l 326 (957)
.|+.+..
T Consensus 234 ~~~~~~l~T 242 (436)
T 3h9m_A 234 KKTGDTIIS 242 (436)
T ss_dssp EEETTEEEE
T ss_pred EECCCEEEE
T ss_conf 875837886
No 68
>2gff_A LSRG protein; dimeric alpha+beta barrel ferredoxin fold, sugar binding protein; 1.75A {Yersinia pestis}
Probab=38.26 E-value=5 Score=18.27 Aligned_cols=30 Identities=20% Similarity=0.115 Sum_probs=24.8
Q ss_pred EECCCCCCCHHHHHHCCCCCCCCCCEEECC
Q ss_conf 824311110134320221138653111000
Q gi|254781051|r 668 VNSFLSEQAVLGFEYGYSLNNLNALTIWEA 697 (957)
Q Consensus 668 ~nS~LSE~avlgFEyGys~~~p~~L~iWEA 697 (957)
.....+|-|++.|++..+.++|+.+++||-
T Consensus 26 ~~~~~~epGcl~~~~~~~~~dp~~~~i~E~ 55 (106)
T 2gff_A 26 HLGSIREAGNLRFDVLRDEHIPTRFYIYEA 55 (106)
T ss_dssp HHHHHTSTTEEEEEEEEESSCTTEEEEEEE
T ss_pred HHHHHCCCCCEEEEEEECCCCCCEEEEEEE
T ss_conf 999970999468899861689988999999
No 69
>2dvk_A UPF0130 protein APE0816; hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=37.68 E-value=16 Score=14.53 Aligned_cols=72 Identities=17% Similarity=0.164 Sum_probs=42.9
Q ss_pred HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEE-------EEECCCCCCCCCCCCCCCCHHHHHHHHHCCCH
Q ss_conf 11220340587426788999999999999999738973998-------64211256564354223557888886718998
Q gi|254781051|r 431 ISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVID-------IVCYRRFGHNEGDEPSFTQPMMYKTIRSHKSV 503 (957)
Q Consensus 431 iAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvID-------lv~YRr~GHNE~DeP~fTQP~mY~~I~~hp~v 503 (957)
+--.++.||+||.+-|.|+.....++|.+ .-|+.-=++- +|.-| +-.-+|-|-..+ .+.-|
T Consensus 84 ~~lk~ep~ILHV~cr~le~A~~Ll~~A~~--aGfr~SGI~s~~~~~r~iVaIr--s~~~le~Pl~~~--------g~~lV 151 (188)
T 2dvk_A 84 LWLKVTGPILHLRVEGWQCAKSLLEAARR--NGFKHSGVISIAEDSRLVIEIM--SSQSMSVPLVME--------GARIV 151 (188)
T ss_dssp EEEEEECCEEEEEESSHHHHHHHHHHHHH--TTCCEEEEEEECTTSCEEEEEE--CSCEEEEEEEET--------TEECC
T ss_pred EEEEECCCEEEEEECCHHHHHHHHHHHHH--CCCCHHCEEEECCCCCEEEEEE--CCCCEEEEEEEC--------CCCCC
T ss_conf 69980398999994899999999999997--3830325366258994799993--678478777539--------91646
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999998644
Q gi|254781051|r 504 LQLYADSLMKN 514 (957)
Q Consensus 504 ~~~Y~~~Li~~ 514 (957)
.+-|.+.|++.
T Consensus 152 ~~eyl~~lv~~ 162 (188)
T 2dvk_A 152 GDDALDMLIEK 162 (188)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
T ss_conf 99999999999
No 70
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=36.63 E-value=2.5 Score=20.56 Aligned_cols=46 Identities=17% Similarity=0.100 Sum_probs=17.6
Q ss_pred EEEEECCHHH-HHHHHHHHHCCCC--CEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 8998688578-9999999976998--689998401486828999999853
Q gi|254781051|r 839 RVILCTGKVY-YDLLDNRDMRNIA--DIYLLRIEQLYPFPEDYLIKVLSR 885 (957)
Q Consensus 839 rvi~csGKvy-ydL~~~r~~~~~~--~vaivRiEqLyPfP~~~l~~~l~~ 885 (957)
++++.+|..- -+|.+...+.|.. .+.+-|-+ ..|-..+.+...+..
T Consensus 159 ~iL~~~g~~~~~~L~~~L~~~G~~v~~~~vY~t~-~~~~~~~~~~~~l~~ 207 (286)
T 1jr2_A 159 PLLFPCGNLKREILPKALKDKGIAMESITVYQTV-AHPGIQGNLNSYYSQ 207 (286)
T ss_dssp CEEEEESCGGGCCHHHHHHTTTCCEEEEECEEEE-ECTTHHHHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHCCCEEEEEEEEEEE-CCCCCHHHHHHHHHH
T ss_conf 5998605665078999998479855699887221-487421889999873
No 71
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside hydrolase family 5, michaelis complex, SKEW-BOAT, distortio; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=36.52 E-value=12 Score=15.44 Aligned_cols=18 Identities=22% Similarity=0.231 Sum_probs=9.6
Q ss_pred HHHHHHHCCCEEEEEEEC
Q ss_conf 999997389739986421
Q gi|254781051|r 458 VSFRMKFHKSVVIDIVCY 475 (957)
Q Consensus 458 ~~yR~~F~kDVvIDlv~Y 475 (957)
+++=.+.+-=|+||+-++
T Consensus 86 v~~a~~~Gi~VilD~H~~ 103 (303)
T 7a3h_A 86 VEAAIDLDIYVIIDWHIL 103 (303)
T ss_dssp HHHHHHHTCEEEEEEECS
T ss_pred HHHHHHCCCEEEEECCCC
T ss_conf 999998799899955557
No 72
>1q8b_A Protein YJCS; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, unknown function; 1.90A {Bacillus subtilis} SCOP: d.58.4.6
Probab=36.00 E-value=5.1 Score=18.18 Aligned_cols=30 Identities=13% Similarity=0.156 Sum_probs=24.6
Q ss_pred EECCCCCCCHHHHHHCCCCCCCCCCEEECC
Q ss_conf 824311110134320221138653111000
Q gi|254781051|r 668 VNSFLSEQAVLGFEYGYSLNNLNALTIWEA 697 (957)
Q Consensus 668 ~nS~LSE~avlgFEyGys~~~p~~L~iWEA 697 (957)
.....+|-|++.|+..-+..+|+.+++||-
T Consensus 39 ~~~tr~E~GCl~y~~~~d~~~p~~f~~~E~ 68 (105)
T 1q8b_A 39 EEETNKEEGCITFHAYPLEPSERKIMLWEI 68 (105)
T ss_dssp HHHHTTSTTEEEEEEEECCGGGCEEEEEEE
T ss_pred HHHHHCCCCCEEEEEEECCCCCCEEEEEEE
T ss_conf 999836999589999966999988999999
No 73
>1i1q_A Anthranilate synthase component I; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: d.161.1.1 PDB: 1i7q_A 1i7s_A*
Probab=35.88 E-value=5.4 Score=18.04 Aligned_cols=27 Identities=0% Similarity=0.010 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 589999999999987379107998067
Q gi|254781051|r 244 EVIIPAIEEIIRQGVQQGVDEMILGMA 270 (957)
Q Consensus 244 EslIP~L~~ii~~a~~~Gv~eiviGMa 270 (957)
|...-+++.+++.-....+..||+.-.
T Consensus 243 ~~y~~~V~~~~~~I~~Gdi~qvvLsr~ 269 (520)
T 1i1q_A 243 DAFGAVVRQLQKAIRAGEIFQVVPSRR 269 (520)
T ss_dssp HHHHHHHHHHHHHHHTTSCSEECCEEE
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf 999999999999987899059965005
No 74
>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A*
Probab=35.66 E-value=13 Score=15.05 Aligned_cols=57 Identities=16% Similarity=0.108 Sum_probs=30.7
Q ss_pred CEEEEEEEECCCC-CCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHC
Q ss_conf 4047888625753-33467258876451067744365799984160201247010246778400112203
Q gi|254781051|r 368 SRVLPLIIHGDAA-FAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIG 436 (957)
Q Consensus 368 ~~vlpiliHGDAA-faGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~ 436 (957)
-|.||-.=|=-.. | .|.|+.+|+. |-+--||-. |--|-.|.++|-+++-.|=...++
T Consensus 293 ~k~~~~tk~~~~~~~--~~~~~~~~~~--~~~~~t~~~--------iq~~~~~~e~~~~p~~~~~~~~~~ 350 (763)
T 3kp1_A 293 MRAQMNTKYMEASTR--EATVTHVLNL--LISKLTRAD--------IQSTITPDEGRNVPWHIYNIEACD 350 (763)
T ss_dssp EEECCCCTTCCSCHH--HHHHHHHHHH--HHHHHSCCS--------EECCCCTTTTTSSCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCH--HHHHHHHHHH--HHHHHHCCC--------HHHCCCCHHHHCCCHHHHHHHHHH
T ss_conf 345898450246423--3416879999--999985454--------123167522204833677899998
No 75
>2qg3_A UPF0130 protein AF_2059; TYW3 methyltransferase-like prrotein, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.95A {Archaeoglobus fulgidus dsm 4304}
Probab=34.56 E-value=17 Score=14.18 Aligned_cols=68 Identities=18% Similarity=0.146 Sum_probs=39.2
Q ss_pred HHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC-------CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHH
Q ss_conf 12203405874267889999999999999997389-------73998642112565643542235578888867189989
Q gi|254781051|r 432 SKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHK-------SVVIDIVCYRRFGHNEGDEPSFTQPMMYKTIRSHKSVL 504 (957)
Q Consensus 432 AK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~k-------DVvIDlv~YRr~GHNE~DeP~fTQP~mY~~I~~hp~v~ 504 (957)
--.++.||+||-.-|.|+.....++|.+ .-|+. .++|-+-| -.-+|-|-..+ ..--|.
T Consensus 103 ~lk~ep~ILHV~cr~le~A~~Ll~~A~~--~GFr~SGI~s~~~~iVaIrs-----~~~le~Pl~~~--------g~~lV~ 167 (208)
T 2qg3_A 103 WLIQYPPIIHVACRNIGAAKLLMNAANT--AGFRRSGVISLSNYVVEIAS-----LERIELPVAEK--------GLMLVD 167 (208)
T ss_dssp EEEEECCEEEEEESSHHHHHHHHHHHHH--HTCTTCEEEETTTTEEEECC-----CCCEEEEEEET--------TEESSC
T ss_pred EEEECCCEEEEEECCHHHHHHHHHHHHH--CCCCHHCCCCCCCEEEEEEE-----CCCEEEEEECC--------CCCCCC
T ss_conf 9971297899996899999999999997--18212031117835999951-----58453467319--------937069
Q ss_pred HHHHHHHHHC
Q ss_conf 9999998644
Q gi|254781051|r 505 QLYADSLMKN 514 (957)
Q Consensus 505 ~~Y~~~Li~~ 514 (957)
+-|.+.|++.
T Consensus 168 ~eyL~~Lv~~ 177 (208)
T 2qg3_A 168 DAYLSYVVRW 177 (208)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 76
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=34.26 E-value=9 Score=16.33 Aligned_cols=34 Identities=9% Similarity=0.174 Sum_probs=18.5
Q ss_pred HHHHHHCCCEEEECCCCHHH--HHHHHHHHHHHHHH
Q ss_conf 01122034058742678899--99999999999997
Q gi|254781051|r 430 DISKSIGIPIFHVNGDDPEA--VIRVVRMAVSFRMK 463 (957)
Q Consensus 430 DiAK~i~aPI~HVN~DdpEa--v~~~~~lA~~yR~~ 463 (957)
+.++.+.+|++|+.|.+=.- .-.+.+|+-.++..
T Consensus 166 ~~~~~i~~P~L~ihG~~D~~Vp~~~~~~l~~~~~~~ 201 (243)
T 1ycd_A 166 AVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKA 201 (243)
T ss_dssp CCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC
T ss_conf 100236898799845899988999999999999975
No 77
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=33.49 E-value=18 Score=14.06 Aligned_cols=41 Identities=24% Similarity=0.382 Sum_probs=32.1
Q ss_pred CCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf 84001122034058742678899999999999999973897399864211
Q gi|254781051|r 427 YASDISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYR 476 (957)
Q Consensus 427 Y~TDiAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~YR 476 (957)
-+..+++...+..++|+..|+++...+++ +.||||..+-|+
T Consensus 59 ~a~~~~~~~~~~~~~~D~~d~~~l~~~i~---------~~DvVI~a~P~~ 99 (467)
T 2axq_A 59 NAQALAKPSGSKAISLDVTDDSALDKVLA---------DNDVVISLIPYT 99 (467)
T ss_dssp HHHHHHGGGTCEEEECCTTCHHHHHHHHH---------TSSEEEECSCGG
T ss_pred HHHHHHHCCCCCEEEEECCCHHHHHHHHH---------CCCEEEECCCHH
T ss_conf 99998601598469984799999999872---------599999997712
No 78
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=33.00 E-value=18 Score=14.01 Aligned_cols=51 Identities=14% Similarity=0.195 Sum_probs=39.3
Q ss_pred CCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEC
Q ss_conf 765644057887521437826972488999999999974353488689856
Q gi|254781051|r 740 PEHSSARLERFLQMCAENNMYVANCTSPANYFHILRRQIYDRSSRPLIMMA 790 (957)
Q Consensus 740 PEHSSaRlERfLQl~a~~N~~V~~~ttpAq~FH~LRRQ~~r~~rkPLiv~t 790 (957)
--|||+|=.=|+|-+..-++.-+..-+|++....|...-.....+|++|.=
T Consensus 8 ~~~~~~~~~~~f~~~~~~s~s~~~~I~p~~L~~~i~~g~~~~~~~~~~IID 58 (169)
T 3f4a_A 8 HHHSSGRENLYFQGMDSYSITNVKYLDPTELHRWMQEGHTTTLREPFQVVD 58 (169)
T ss_dssp ------------------CCCSEEEECHHHHHHHHHHTSCTTTCCCEEEEE
T ss_pred CCCCCCCCCEEECCHHHHHHCCCCEECHHHHHHHHHCCCCCCCCCCEEEEE
T ss_conf 445567776564255554153497748999999998377667789769998
No 79
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=32.98 E-value=13 Score=15.06 Aligned_cols=29 Identities=21% Similarity=0.383 Sum_probs=21.6
Q ss_pred CCCCCCCCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 88765644057887521437826972488
Q gi|254781051|r 738 QGPEHSSARLERFLQMCAENNMYVANCTS 766 (957)
Q Consensus 738 qGPEHSSaRlERfLQl~a~~N~~V~~~tt 766 (957)
.-|+.+..+|||||-+|...|++++.+=|
T Consensus 95 ~~P~~~~~~idR~Lv~a~~~~i~pvIvln 123 (301)
T 1u0l_A 95 KMPETSTYIIDKFLVLAEKNELETVMVIN 123 (301)
T ss_dssp STTCCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 78765889999999999876997899997
No 80
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=32.92 E-value=18 Score=14.00 Aligned_cols=20 Identities=10% Similarity=0.280 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHCCCCEEEEEC
Q ss_conf 999999998737910799806
Q gi|254781051|r 249 AIEEIIRQGVQQGVDEMILGM 269 (957)
Q Consensus 249 ~L~~ii~~a~~~Gv~eiviGM 269 (957)
-|+.+|+.|.+.|+- |+|-+
T Consensus 73 ~ld~vi~~a~~~Gl~-VIlD~ 92 (464)
T 1wky_A 73 TVRNLISLAEDNNLV-AVLEV 92 (464)
T ss_dssp HHHHHHHHHHHTTCE-EEEEE
T ss_pred HHHHHHHHHHHCCCE-EEEEC
T ss_conf 999999999987999-99963
No 81
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=32.82 E-value=16 Score=14.38 Aligned_cols=20 Identities=5% Similarity=0.086 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHCCCCEEE
Q ss_conf 99999999998737910799
Q gi|254781051|r 247 IPAIEEIIRQGVQQGVDEMI 266 (957)
Q Consensus 247 IP~L~~ii~~a~~~Gv~eiv 266 (957)
..-||.+|+.|.+.|+.=|+
T Consensus 113 ~~~ld~~v~~a~~~gl~Vil 132 (408)
T 1h4p_A 113 ESYLDQAIGWARNNSLKVWV 132 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEE
T ss_conf 99999999999986997999
No 82
>3f44_A Putative monooxygenase; YP_193413.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.55A {Lactobacillus acidophilus ncfm}
Probab=32.67 E-value=4.7 Score=18.44 Aligned_cols=31 Identities=16% Similarity=0.000 Sum_probs=24.0
Q ss_pred EEECCCCCCCHHHHHHCCCCCCCCCCEEECC
Q ss_conf 9824311110134320221138653111000
Q gi|254781051|r 667 VVNSFLSEQAVLGFEYGYSLNNLNALTIWEA 697 (957)
Q Consensus 667 v~nS~LSE~avlgFEyGys~~~p~~L~iWEA 697 (957)
+.+|.-.|.|++.|++.++..+|+.+++||.
T Consensus 31 ~~~s~~~E~G~l~y~~~~d~~dp~~~~~~E~ 61 (220)
T 3f44_A 31 MHDSIPAEEGTLLIGSGHDDAHGEDNYEIEV 61 (220)
T ss_dssp HHHHTTTSTTEEEEEEEEETTEEEEEEEEEE
T ss_pred HHHHHCCCCCEEEEEEEECCCCCCEEEEEEE
T ss_conf 8876517999389999960899978999999
No 83
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=32.29 E-value=19 Score=13.93 Aligned_cols=14 Identities=36% Similarity=0.451 Sum_probs=6.4
Q ss_pred CCHHHHHHHHHHHH
Q ss_conf 78999999999840
Q gi|254781051|r 160 ATIPEIVDVLSHLY 173 (957)
Q Consensus 160 ~tL~eIi~~L~~tY 173 (957)
.+|+-+.+.|++..
T Consensus 86 ~SL~pva~~L~~~l 99 (415)
T 16pk_A 86 ATLKPVAKRLSELL 99 (415)
T ss_dssp GCSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
T ss_conf 47288999999985
No 84
>2ixs_A SDAI restriction endonuclease; hydrolase, domain architecture; HET: EPE; 2.0A {Streptomyces diastaticus}
Probab=32.13 E-value=19 Score=13.91 Aligned_cols=15 Identities=13% Similarity=0.244 Sum_probs=8.1
Q ss_pred CCCHHHHHHHHHHHH
Q ss_conf 778999999999840
Q gi|254781051|r 159 SATIPEIVDVLSHLY 173 (957)
Q Consensus 159 ~~tL~eIi~~L~~tY 173 (957)
....++|++..++-|
T Consensus 58 ~~~~~~im~~~~~~y 72 (323)
T 2ixs_A 58 RLGVQKIMDWSGAYW 72 (323)
T ss_dssp CEEHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHC
T ss_conf 336209999999865
No 85
>1p7h_L Nuclear factor of activated T-cells, cytoplasmic 2; DNA binding protein, transcription regulation, activator, transcription/DNA complex; 2.60A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3 PDB: 2o93_L 1a02_N* 1pzu_B 1owr_M 2as5_N 1s9k_C 1nfa_A 1a66_A*
Probab=31.03 E-value=13 Score=15.12 Aligned_cols=19 Identities=16% Similarity=0.394 Sum_probs=14.7
Q ss_pred CCCCCCCCCEEECCCCCCCC
Q ss_conf 21138653111000024424
Q gi|254781051|r 684 YSLNNLNALTIWEAQFGDFA 703 (957)
Q Consensus 684 ys~~~p~~L~iWEAQFGDF~ 703 (957)
+.-.+++..++||| ||||.
T Consensus 219 F~e~~~~g~~~WE~-~g~f~ 237 (286)
T 1p7h_L 219 FTEKTTDGQQIWEM-EATVD 237 (286)
T ss_dssp EEEECSSSCEEEEE-EECBC
T ss_pred EEEECCCCCCEEEE-EEEEC
T ss_conf 98878999734788-88736
No 86
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=30.47 E-value=4 Score=19.01 Aligned_cols=285 Identities=16% Similarity=0.158 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 78999999999999988170454016777777667877678766699978817157256657877778999999999840
Q gi|254781051|r 94 SVKDFFQVMKMIDAYRSYGHFKANIDPLGYNSHQKDLSELSPAHYGFVKADYDRKICMKGVLGLESATIPEIVDVLSHLY 173 (957)
Q Consensus 94 ~~~kq~rV~~LI~AYR~~GHl~A~lDPLgl~~~~~~~peL~~~~yGLse~DLd~~f~~~~~~g~~~~tL~eIi~~L~~tY 173 (957)
..+--....+-|+|-|..|...--+||= +.... +|+. .+ | .++. ++.|...|.+.+++.=
T Consensus 23 a~EfDys~~qai~alke~Gi~tVlVnsN----pati~--td~~-----~A--D-~vYi------ePlt~e~i~~Ii~~e~ 82 (1073)
T 1a9x_A 23 ACEFDYSGAQACKALREEGYRVINVNSN----PATIM--TDPE-----MA--D-ATYI------EPIHWEVVRKIIEKER 82 (1073)
T ss_dssp CTHHHHHHHHHHHHHHHHTCEEEEECSC----TTCGG--GCGG-----GS--S-EEEC------SCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCC----HHHHC--CCCC-----CC--C-EEEE------CCCCHHHHHHHHHHHC
T ss_conf 1013778999999999879989998588----44624--8844-----15--0-6798------7899999999999858
Q ss_pred CCCEEEEEECCCCH-----HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCEECCCCHHHHH
Q ss_conf 64302777248998-----9999999984145778887988999999999999989999986-40336222256465899
Q gi|254781051|r 174 CSNIGVEFMHIVDS-----IERDWVRNTIEDYDFSSNFSKEEQRDILDKLVRAEGFEKFIDI-KYKGAKRFGADGSEVII 247 (957)
Q Consensus 174 CgsIGvEymHI~d~-----eer~Wlq~riE~~~~~~~~s~eeK~~iL~~L~~Ae~FE~FL~~-Kf~g~KRFsLEG~EslI 247 (957)
+..|=..|---+-. -.++++-++.- .. -...+.+- ++.+-.-+.|-+.+.+ .-|..+---+ +
T Consensus 83 pDaI~p~~GgqtaLnl~~~L~e~gil~~~g-I~-~iGps~~~----I~~~~Dr~~~r~~m~~~gvPv~~s~~v---~--- 150 (1073)
T 1a9x_A 83 PDAVLPTMGGQTALNCALELERQGVLEEFG-VT-MIGATADA----IDKAEDRRRFDVAMKKIGLETARSGIA---H--- 150 (1073)
T ss_dssp CSEEECSSSHHHHHHHHHHHHHTTHHHHHT-CE-ECSSCHHH----HHHHHSHHHHHHHHHHTTCCCCSEEEE---S---
T ss_pred CCEEEECCCCHHHHHHHHHHHHCCCHHHCC-CE-EECCCHHH----HHHHHCHHHHHHHHHHCCCCCCCCEEE---C---
T ss_conf 999998887847899999999759678779-88-98899999----997259999999999779998997220---8---
Q ss_pred HHHHHHHHHHHHCCCCEEE---EECCCCCHH-----HHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC---CCCCCEEE-
Q ss_conf 9999999998737910799---806765526-----89998853798999998558874322345551---00150268-
Q gi|254781051|r 248 PAIEEIIRQGVQQGVDEMI---LGMAHRGRL-----NVLSQIMNKLPRSIFYEFKGKGPSEKEYSGDV---KYHLGLCC- 315 (957)
Q Consensus 248 P~L~~ii~~a~~~Gv~eiv---iGMaHRGRL-----NVL~Nvl~Kp~~~iF~EF~g~~~~~~~~sGDV---KYHLG~s~- 315 (957)
-++++++.|.+-|.-=+| .|+--||+- .=|...+ +.-+..| +.+.| ||=.|+..
T Consensus 151 -s~eea~~~A~~IGyPViIrps~~~GG~Gm~iv~~~~eL~~~~----~~a~~~s---------~~~~vliEk~i~g~keI 216 (1073)
T 1a9x_A 151 -TMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEIC----ARGLDLS---------PTKELLIDESLIGWKEY 216 (1073)
T ss_dssp -SHHHHHHHHHHHCSSEEEEETTCCTTTTCEEESSHHHHHHHH----HHHHHHC---------TTSCEEEEECCTTSEEE
T ss_pred -CHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCHHHHHHHH----HHHHHHC---------CCCCEEEEEECCCCEEE
T ss_conf -999999999865998899978778998760777999999999----9999738---------99867999851785589
Q ss_pred EEE----ECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHH
Q ss_conf 898----3596189997178773100044553236777764166654455565445404788862575333467258876
Q gi|254781051|r 316 NRQ----ICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGDAAFAGQGIVSETF 391 (957)
Q Consensus 316 ~~~----~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGDAAfaGQGVV~Etl 391 (957)
+++ -.|+.+++.- .|-++|+ |.+.+| ---+.|.+.--|.-. |-+-.-++
T Consensus 217 EvqVlrD~~gn~i~v~~------~E~~d~~--------Gihtgd-----------sI~vaPa~tL~d~~~--q~lr~aA~ 269 (1073)
T 1a9x_A 217 EMEVVRDKNDNCIIVCS------IENFDAM--------GIHTGD-----------SITVAPAQTLTDKEY--QIMRNASM 269 (1073)
T ss_dssp EEEEEECTTCCEEEEEE------EEESSCT--------TSCGGG-----------SCEEESCCSCCHHHH--HHHHHHHH
T ss_pred EEEEEECCCCCEEEEEE------CHHHHHH--------CCCCCC-----------EEEEECCCCCCHHHH--HHHHHHHH
T ss_conf 99998717998899941------0113342--------022466-----------048812763899999--99999999
Q ss_pred HHHCCCCCCCCCE-EEEEEC---CCEECCC-CCHHCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 4510677443657-999841---6020124-70102467784001122034058742678899999999999999973
Q gi|254781051|r 392 GLSGLSGYTVAGN-IHLIIN---NQIGFTT-NPSSARSCTYASDISKSIGIPIFHVNGDDPEAVIRVVRMAVSFRMKF 464 (957)
Q Consensus 392 ~ls~l~gY~tGGT-iHiVvN---NQIGFTT-~p~d~RSs~Y~TDiAK~i~aPI~HVN~DdpEav~~~~~lA~~yR~~F 464 (957)
.+.+-=||.+||| |++.+| +++=|.- ||+-+||++-. .|..+.||.. .++++|+-|+-..
T Consensus 270 kia~~l~~~~gg~nVqFa~d~~~~~~y~iEvNpR~srs~~va---skaTG~pia~----------v~akia~G~~L~e 334 (1073)
T 1a9x_A 270 AVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALA---SKATGFPIAK----------VAAKLAVGYTLDE 334 (1073)
T ss_dssp HHHHHHTCCSEEEEEEEEECTTTCCEEEEEEESSCCHHHHHH---HHHHSCCHHH----------HHHHHHTTCCGGG
T ss_pred HHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHH---HHHCCCCHHH----------HHHHHHCCCCCCC
T ss_conf 999974943366336998748999589998235311014444---5640886899----------9999974897100
No 87
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=30.42 E-value=20 Score=13.71 Aligned_cols=41 Identities=12% Similarity=0.294 Sum_probs=28.3
Q ss_pred CCCHHHHHHHHH-CCCHHHHHHHHHHHCCC---CCHHHHHHHHHH
Q ss_conf 355788888671-89989999999864489---898999999999
Q gi|254781051|r 488 FTQPMMYKTIRS-HKSVLQLYADSLMKNQV---ISKQELQSLANN 528 (957)
Q Consensus 488 fTQP~mY~~I~~-hp~v~~~Y~~~Li~~g~---it~~e~~~~~~~ 528 (957)
.|.+.+++.... +-+....|..-+-.+|+ +|.+-++++.+.
T Consensus 336 L~~~dL~~ILtepknsLi~Qy~~lf~~egV~L~FT~~Al~~IA~~ 380 (444)
T 1g41_A 336 LSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEA 380 (444)
T ss_dssp CCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHH
T ss_conf 279999999997764199999999976498799878999999999
No 88
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=30.40 E-value=18 Score=14.04 Aligned_cols=23 Identities=4% Similarity=0.206 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 999999999998737910799806
Q gi|254781051|r 246 IIPAIEEIIRQGVQQGVDEMILGM 269 (957)
Q Consensus 246 lIP~L~~ii~~a~~~Gv~eiviGM 269 (957)
-+-.|+.+|+.|.+.|+. |+|.|
T Consensus 111 ~~~~ld~~i~~a~~~gl~-VilDl 133 (399)
T 3n9k_A 111 QVQYLEKALGWARKNNIR-VWIDL 133 (399)
T ss_dssp HHHHHHHHHHHHHHTTCE-EEEEE
T ss_pred HHHHHHHHHHHHHHCCCE-EEEEE
T ss_conf 999999999999975998-99981
No 89
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=29.62 E-value=12 Score=15.38 Aligned_cols=63 Identities=10% Similarity=0.148 Sum_probs=38.0
Q ss_pred CCHHHHHHHHHHHHCCCEEEEEE--CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78999999999840643027772--48998999999998414577888798899999999999998999998640
Q gi|254781051|r 160 ATIPEIVDVLSHLYCSNIGVEFM--HIVDSIERDWVRNTIEDYDFSSNFSKEEQRDILDKLVRAEGFEKFIDIKY 232 (957)
Q Consensus 160 ~tL~eIi~~L~~tYCgsIGvEym--HI~d~eer~Wlq~riE~~~~~~~~s~eeK~~iL~~L~~Ae~FE~FL~~Kf 232 (957)
..+++....|++.| .+-++|. ..++.+-+.-+.+ . ..++..++..++.+.++--+|.||...|
T Consensus 74 ~~v~~F~~~L~~~~--~i~v~~~DErlTS~eA~~~l~~---~-----~~~~~k~k~~iD~~AA~lILq~~Ld~~y 138 (138)
T 1nu0_A 74 ARARKFANRIHGRF--GVEVKLHDERLSTVEARSGLFE---Q-----GGYRALNKGKVDSASAVIILESYMEQGY 138 (138)
T ss_dssp HHHHHHHHHHHHHH--CCCEEEEEEECCCCCC---------------CCCCCCCHHHHTTHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHH--CCCEEEEECCCCHHHHHHHHHH---C-----CCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999850--9987996076449999999997---3-----5632104542639999999999997279
No 90
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii OT3} PDB: 2how_A
Probab=28.99 E-value=16 Score=14.37 Aligned_cols=26 Identities=12% Similarity=0.212 Sum_probs=13.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 489898999999999999977566654
Q gi|254781051|r 514 NQVISKQELQSLANNWHKYLEAEYKES 540 (957)
Q Consensus 514 ~g~it~~e~~~~~~~~~~~l~~~~~~~ 540 (957)
+-+-|++|++.+++...-. +.+++..
T Consensus 129 R~iKs~~EI~~~r~A~~i~-~~~~~~~ 154 (356)
T 1wn1_A 129 RMIKDKEEVKMMEHASRIA-DKVFEEI 154 (356)
T ss_dssp HTSCCHHHHHHHHHHHHHH-HHHHHHH
T ss_pred HHHCCHHHHHHHHHHHHHH-HHHHHHH
T ss_conf 9739999999999999989-9999999
No 91
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=28.56 E-value=21 Score=13.60 Aligned_cols=10 Identities=30% Similarity=0.448 Sum_probs=3.5
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254781051|r 520 QELQSLANNW 529 (957)
Q Consensus 520 ~e~~~~~~~~ 529 (957)
+|+++++++.
T Consensus 532 ~efk~LV~~a 541 (921)
T 2wan_A 532 TELKQLIQSL 541 (921)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 92
>1x7v_A PA3566 protein, APC5058; structural genomics, protein structure initiative, midwest center for structural genomics, alpha-beta plait, PSI; 1.78A {Pseudomonas aeruginosa} SCOP: d.58.4.11
Probab=28.49 E-value=9.2 Score=16.26 Aligned_cols=29 Identities=10% Similarity=0.135 Sum_probs=22.1
Q ss_pred ECCCCCCCHHHHHHCCCCCCCCCCEEECC
Q ss_conf 24311110134320221138653111000
Q gi|254781051|r 669 NSFLSEQAVLGFEYGYSLNNLNALTIWEA 697 (957)
Q Consensus 669 nS~LSE~avlgFEyGys~~~p~~L~iWEA 697 (957)
....+|.|+++|++.-+..+|+.+++||-
T Consensus 32 ~~~~~epGcl~y~~~~~~~~p~~~~~~E~ 60 (99)
T 1x7v_A 32 APSRAEAGCLQYDLHQDRHDSHLFYMIEQ 60 (99)
T ss_dssp HHHHHSTTEEEEEEEECSSCTTEEEEEEE
T ss_pred HHHHCCCCCEEEEEEECCCCCCEEEEEEE
T ss_conf 99965999589999983899978999999
No 93
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae}
Probab=28.17 E-value=22 Score=13.43 Aligned_cols=31 Identities=13% Similarity=0.116 Sum_probs=27.8
Q ss_pred CCHHHHHHHCCCCCEEEEECCCHHHHHHHHH
Q ss_conf 4057887521437826972488999999999
Q gi|254781051|r 745 ARLERFLQMCAENNMYVANCTSPANYFHILR 775 (957)
Q Consensus 745 aRlERfLQl~a~~N~~V~~~ttpAq~FH~LR 775 (957)
.||+|.-+...+.|+..+..|.|+|+|-+--
T Consensus 3 ~Rl~klr~~m~~~~ld~~lit~~~ni~YlTG 33 (132)
T 3ooo_A 3 SKLNRIRHHLHSVQAELAVFSDPVTVNYLTG 33 (132)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCHHHHHHHHS
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCHHHHHCC
T ss_conf 3999999999986999999925313247408
No 94
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=27.78 E-value=22 Score=13.39 Aligned_cols=42 Identities=12% Similarity=0.222 Sum_probs=19.0
Q ss_pred CCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHH
Q ss_conf 6579998416020124701024677840011220340587426788999999
Q gi|254781051|r 402 AGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIPIFHVNGDDPEAVIRV 453 (957)
Q Consensus 402 GGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aPI~HVN~DdpEav~~~ 453 (957)
++...++|-|-.+|..+ .. |---+..|..-++.++++.+...
T Consensus 401 ~~~~~~~vfN~l~~~r~------~~----v~~~~~~~~~~~~~~~~~~~~~~ 442 (899)
T 3lvt_A 401 EKAHPFVLFNTSGYQKT------EV----VTVEVEIERLPFYTGKPEDLYHE 442 (899)
T ss_dssp TTCEEEEEEECSSSCEE------EE----EEEEEEEEEEEGGGSCHHHHHHH
T ss_pred CCCCEEEEECCCCCCEE------EE----EEEEECCCEEEECCCCCCCEEEE
T ss_conf 88764999879986302------47----99960255045305776520367
No 95
>2a6p_A Possible phosphoglycerate mutase GPM2; predicted phosphoglycerate mutase, structural genomics, PSI; 2.20A {Mycobacterium tuberculosis H37RV}
Probab=27.43 E-value=22 Score=13.34 Aligned_cols=81 Identities=7% Similarity=-0.018 Sum_probs=43.9
Q ss_pred CCCHHHHHH-------HHHHHHHHHHHCCCCEEEEECCCCCHHHHHH-HHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 564658999-------9999999987379107998067655268999-88537989999985588743223455510015
Q gi|254781051|r 240 ADGSEVIIP-------AIEEIIRQGVQQGVDEMILGMAHRGRLNVLS-QIMNKLPRSIFYEFKGKGPSEKEYSGDVKYHL 311 (957)
Q Consensus 240 LEG~EslIP-------~L~~ii~~a~~~Gv~eiviGMaHRGRLNVL~-Nvl~Kp~~~iF~EF~g~~~~~~~~sGDVKYHL 311 (957)
..||||+.- +++.+++... -+.|+| .+|-|=+.+|. .+++.|+.... .| +-.-
T Consensus 118 ~p~gEs~~~~~~Rv~~~~~~l~~~~~---~~~vlv-VsHg~~ir~ll~~~lg~~~~~~~-~~--------------~~~n 178 (208)
T 2a6p_A 118 CPAGESVAQVNDRADSAVALALEHMS---SRDVLF-VSHGHFSRAVITRWVQLPLAEGS-RF--------------AMPT 178 (208)
T ss_dssp CTTSCCHHHHHHHHHHHHHHHHHHTT---TSCEEE-EECHHHHHHHHHHHTTCCGGGGG-GB--------------CCCT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCC---CCCEEE-ECCHHHHHHHHHHHHCCCHHHHH-HC--------------CCCC
T ss_conf 56862078999999999999876404---773799-85759999999999694988985-34--------------6789
Q ss_pred CEEEEEEECCCEEEEEECCCCCCCHHCC
Q ss_conf 0268898359618999717877310004
Q gi|254781051|r 312 GLCCNRQICGKDVKLLLQSNPSHLEFVD 339 (957)
Q Consensus 312 G~s~~~~~~g~~v~lsL~~NPSHLEaVn 339 (957)
+.-+.++++++...|...+.-+||+-|.
T Consensus 179 ~sit~l~~~~g~~~l~~~n~t~HL~p~~ 206 (208)
T 2a6p_A 179 ASIGICGFEHGVRQLAVLGLTGHPQPIA 206 (208)
T ss_dssp TEEEEEEEETTEEEEEEEEEECC-----
T ss_pred CEEEEEEEECCEEEEEEEECCCCCCCCC
T ss_conf 8799999989979998996467989778
No 96
>2zpa_A Uncharacterized protein YPFI; RNA modification enzyme, RNA helicase, acetyltransferase, GCN5 acetyltransferase; HET: ACO ADP; 2.35A {Escherichia coli K12}
Probab=27.21 E-value=15 Score=14.70 Aligned_cols=47 Identities=17% Similarity=0.176 Sum_probs=28.1
Q ss_pred CCCCHHHHH-HHHHHH-HHHC-CCCCCCC------HHHHHHHHHHHHHCCC-EEEEECC
Q ss_conf 620567788-899899-8733-4356421------1478988898863583-1578501
Q gi|254781051|r 581 FNTHKIVER-LMANRQ-KMIE-TGKGIDW------SMAESLAFGSLCYEGY-KVRLSGQ 629 (957)
Q Consensus 581 f~~h~~v~k-~~~~R~-~~~~-~~~~iDW------~~AE~LA~~SLl~eG~-~VRlsGQ 629 (957)
..+||.+.+ =+..|. +.++ .-.++|| +|.|.+.|= ...|| +|||+-+
T Consensus 461 IAvhP~~q~~GiGs~lL~~~~~~a~~~D~lg~SFG~t~~L~~FW--~k~Gf~pV~lg~~ 517 (671)
T 2zpa_A 461 IAVHPARQREGTGRQLIAGALQYTQDLDYLSVSFGYTGELWRFW--QRCGFVLVRMGNH 517 (671)
T ss_dssp EEECTTSCSSSHHHHHHHHHHHTCCSCSEEEEEEECCHHHHHHH--HHTTCEEEEECSS
T ss_pred EEECHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH--HHCCCEEEEEECC
T ss_conf 88477555368799999999987358887974537977889999--9779879995366
No 97
>2e62_A Protein AT5G25060; CWF21 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Arabidopsis thaliana}
Probab=27.01 E-value=23 Score=13.29 Aligned_cols=41 Identities=22% Similarity=0.304 Sum_probs=33.6
Q ss_pred HHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 71899899999998644898989999999999999775666
Q gi|254781051|r 498 RSHKSVLQLYADSLMKNQVISKQELQSLANNWHKYLEAEYK 538 (957)
Q Consensus 498 ~~hp~v~~~Y~~~Li~~g~it~~e~~~~~~~~~~~l~~~~~ 538 (957)
++-.-..--|.+.|.++|+-+.+|++..+.-.+..|+..|-
T Consensus 19 RriEva~ieYResLEE~G~kn~eEierkVa~hRkrLesdyG 59 (61)
T 2e62_A 19 RRIEVALIEYRETLEEQGMKNPEEIERKVEINRKRLEVDYG 59 (61)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 88999999999889985144699999999999999977507
No 98
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=26.76 E-value=23 Score=13.26 Aligned_cols=25 Identities=24% Similarity=0.384 Sum_probs=13.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 78899999999999999973897399864
Q gi|254781051|r 445 DDPEAVIRVVRMAVSFRMKFHKSVVIDIV 473 (957)
Q Consensus 445 DdpEav~~~~~lA~~yR~~F~kDVvIDlv 473 (957)
+..+.+-.+.++|. +.+-=||||+-
T Consensus 84 ~~l~~ld~~i~~a~----~~Gi~VIld~H 108 (345)
T 3jug_A 84 DDIDTVREVIELAE----QNKMVAVVEVH 108 (345)
T ss_dssp CCHHHHHHHHHHHH----TTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHH----HCCCEEEEECC
T ss_conf 57999999999999----88999999527
No 99
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=26.35 E-value=23 Score=13.21 Aligned_cols=79 Identities=15% Similarity=0.312 Sum_probs=41.5
Q ss_pred CCCEEEEHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCC-----CCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 88445563442789845999824311110134320221138653111000024-----4245410225655420257623
Q gi|254781051|r 648 TGKRYFPLGNISKDQGHCEVVNSFLSEQAVLGFEYGYSLNNLNALTIWEAQFG-----DFANGAQVILDQFITAGEQKWL 722 (957)
Q Consensus 648 t~~~y~pL~~l~~~q~~f~v~nS~LSE~avlgFEyGys~~~p~~L~iWEAQFG-----DF~NgAQviiDqfiss~e~KW~ 722 (957)
...+..|.+.+.++.--++|--....+|.-.=-+. .-++|-.-+| .|++|.+-|.. .|+.
T Consensus 267 ~~~~~~~~~~i~~~~~i~DIG~~Ti~~~~~~i~~a--------kti~wNGP~GvfE~~~F~~GT~~l~~-ai~~------ 331 (387)
T 1zmr_A 267 APATLKSVNDVKADEQILDIGDASAQELAEILKNA--------KTILWNGPVGVFEFPNFRKGTEIVAN-AIAD------ 331 (387)
T ss_dssp CCCEEEEGGGCCTTCEEEEECHHHHHHHHHHHHHC--------SEEEEESCSBCTTSGGGCHHHHHHHH-HHHH------
T ss_pred CCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHH--------CEEEEECCCCCCCCCCHHHHHHHHHH-HHHH------
T ss_conf 87178516567999717732303367789998641--------66888155444446625389999999-9986------
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCHHHH
Q ss_conf 3368135436888888876564405788
Q gi|254781051|r 723 CTSNLVCLLPHGYEGQGPEHSSARLERF 750 (957)
Q Consensus 723 ~~sglvllLPHGyeGqGPEHSSaRlERf 750 (957)
|+..-+ -|=-|+.|=+++|
T Consensus 332 --~~~~si-------vGGGdt~aai~~~ 350 (387)
T 1zmr_A 332 --SEAFSI-------AGGGDTLAAIDLF 350 (387)
T ss_dssp --SSSEEE-------ECSHHHHHHHHHH
T ss_pred --CCCEEE-------ECCHHHHHHHHHC
T ss_conf --899899-------9687999999982
No 100
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=26.16 E-value=23 Score=13.18 Aligned_cols=98 Identities=19% Similarity=0.250 Sum_probs=47.3
Q ss_pred ECCCCCHH-CCC---C--CCC--------CHHHHHHCCCE-EEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEC---
Q ss_conf 01247010-246---7--784--------00112203405-874267889999999999999997389739986421---
Q gi|254781051|r 414 GFTTNPSS-ARS---C--TYA--------SDISKSIGIPI-FHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCY--- 475 (957)
Q Consensus 414 GFTT~p~d-~RS---s--~Y~--------TDiAK~i~aPI-~HVN~DdpEav~~~~~lA~~yR~~F~kDVvIDlv~Y--- 475 (957)
|+||||.- .++ . .|+ ..+.+..+-|| +-|.++|.|+.+..++.- ..++++|+|-+=+-
T Consensus 24 GvTTNPsl~~ka~~~~~~~~~~~~~~~~~~~~~~~~~g~is~ev~~~~~~~m~~~a~~l----~~~~~nv~IKIP~t~~G 99 (223)
T 1wx0_A 24 GVTTNPTLVAKAFAAKGEALTEEAFAAHLRAICETVGGPVSAEVTALEAEAMVAEGRRL----AAIHPNIVVKLPTTEEG 99 (223)
T ss_dssp EEECCHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTSCEEEECCCSSHHHHHHHHHHH----HHHCTTEEEEEESSHHH
T ss_pred EECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH----HHHCCCEEEEECCCHHH
T ss_conf 48048999997289952567899999999999724589879998369789999999999----86377559995477878
Q ss_pred -------CCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC
Q ss_conf -------1256564354223557888886718998999999986448
Q gi|254781051|r 476 -------RRFGHNEGDEPSFTQPMMYKTIRSHKSVLQLYADSLMKNQ 515 (957)
Q Consensus 476 -------Rr~GHNE~DeP~fTQP~mY~~I~~hp~v~~~Y~~~Li~~g 515 (957)
.+.|-+-.=---||....+...+.--+....|..++-+.|
T Consensus 100 ~~a~~~L~~~Gi~vn~T~vfs~~Qa~~A~~aga~yispyvgR~~d~g 146 (223)
T 1wx0_A 100 LKACKRLSAEGIKVNMTLIFSANQALLAARAGASYVSPFLGRVDDIS 146 (223)
T ss_dssp HHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEEEEBHHHHHHTT
T ss_pred HHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCEEEEECCCHHHCC
T ss_conf 99999861159652788975899999999859929997210022236
No 101
>3e8o_A Uncharacterized protein with erredoxin-like fold; putative antibiotic biosynthesis monooxygenase; HET: MSE; 1.40A {Deinococcus radiodurans}
Probab=25.98 E-value=12 Score=15.29 Aligned_cols=29 Identities=17% Similarity=0.100 Sum_probs=17.2
Q ss_pred ECCCCCCCHHHHHHCCCCCCCCCCEEECC
Q ss_conf 24311110134320221138653111000
Q gi|254781051|r 669 NSFLSEQAVLGFEYGYSLNNLNALTIWEA 697 (957)
Q Consensus 669 nS~LSE~avlgFEyGys~~~p~~L~iWEA 697 (957)
.....|-|++.|++.-+.++|+.++++|.
T Consensus 45 ~~tr~EpGcl~y~~~~~~~~p~~f~~~E~ 73 (119)
T 3e8o_A 45 QATRQEDGCLLYLVSEDLSQPGHFLITEH 73 (119)
T ss_dssp HHHTTSTTEEEEEEEEETTSTTEEEEEEE
T ss_pred HHHHCCCCEEEEEEECCCCCCCEEEEEEE
T ss_conf 99845999089898727899988999999
No 102
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=25.91 E-value=24 Score=13.15 Aligned_cols=138 Identities=22% Similarity=0.321 Sum_probs=70.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCEE-EEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH
Q ss_conf 67889999999999999997389739-98642112565643542235578888867189989999999864489898999
Q gi|254781051|r 444 GDDPEAVIRVVRMAVSFRMKFHKSVV-IDIVCYRRFGHNEGDEPSFTQPMMYKTIRSHKSVLQLYADSLMKNQVISKQEL 522 (957)
Q Consensus 444 ~DdpEav~~~~~lA~~yR~~F~kDVv-IDlv~YRr~GHNE~DeP~fTQP~mY~~I~~hp~v~~~Y~~~Li~~g~it~~e~ 522 (957)
..+|+.+...+++|++++.+|..-|+ +||+| +|...+. +.. |...|.
T Consensus 269 ~~~~~~~~e~~~~a~~~k~~~p~~VvGfDL~G------~E~~g~p---l~~-------------f~~~~~---------- 316 (508)
T 3lgd_A 269 SKDVAVIAESIRMAMGLRIKFPTVVAGFDLVG------HEDTGHS---LHD-------------YKEALM---------- 316 (508)
T ss_dssp TSCHHHHHHHHHHHHHHHHHCTTTEEEEEEES------CTTTSCC---TGG-------------GHHHHT----------
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCC------CCCCCCC---HHH-------------HHHHHH----------
T ss_conf 99999999999999998853898589984357------8556899---899-------------999999----------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHHHHHHC
Q ss_conf 99999999997756665412587656666568626-66778999999998874368998620--5677888998998733
Q gi|254781051|r 523 QSLANNWHKYLEAEYKESESYCPEKLGLLHNGENE-RKNSVSKEILKKIGSSIIRLPKSFNT--HKIVERLMANRQKMIE 599 (957)
Q Consensus 523 ~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~~~-~~T~v~~~~L~~i~~~l~~~Pe~f~~--h~~v~k~~~~R~~~~~ 599 (957)
.+ +..-..-.-.++-++.. ..+......+..|.-...++--|+.+ ||.+.+.+.+|.-.++
T Consensus 317 ------------~~----~~~g~~i~~~~HAGE~~~~g~~~d~nl~dAi~lg~~RIGHG~~l~~~p~l~~~~~~~~I~iE 380 (508)
T 3lgd_A 317 ------------IP----AKDGVKLPYFFHAGETDWQGTSIDRNILDALMLNTTRIGHGFALSKHPAVRTYSWKKDIPIE 380 (508)
T ss_dssp ------------HH----HHTTCCCCBCCEECCSSCCSSTTTTHHHHHHHTTCSSEEECTTGGGCHHHHHHHHHTTCCEE
T ss_pred ------------HH----HHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHCCCEEE
T ss_conf ------------99----98389976132104667887417899999986087535763212579999999997697799
Q ss_pred CC----C---CCCCHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf 43----5---64211478988898863583157850100
Q gi|254781051|r 600 TG----K---GIDWSMAESLAFGSLCYEGYKVRLSGQDC 631 (957)
Q Consensus 600 ~~----~---~iDW~~AE~LA~~SLl~eG~~VRlsGQD~ 631 (957)
-- . .++ .+. .=-+..|+..|+||=|+--|-
T Consensus 381 vCPtSN~~l~~v~-~~~-~HPl~~ll~~Gvpv~I~TDDp 417 (508)
T 3lgd_A 381 VCPISNQVLKLVS-DLR-NHPVATLMATGHPMVISSDDP 417 (508)
T ss_dssp ECHHHHHHTTSCS-SGG-GCTHHHHHHTTCCEEECCBSH
T ss_pred ECHHHHHHHCCCC-CHH-HCHHHHHHHCCCEEEEECCCC
T ss_conf 8842787747789-710-195999998899099958993
No 103
>2g5f_A COG0147: anthranilate/para-aminobenzoate synthases component I; beta sandwhich, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: d.161.1.1 PDB: 2i6y_A
Probab=25.81 E-value=7.7 Score=16.82 Aligned_cols=35 Identities=9% Similarity=0.026 Sum_probs=21.9
Q ss_pred CCCHHHHHHHHHHHHCCCC-------CCCEEEECCCHHHCCC
Q ss_conf 4889999999999743534-------8868985660221080
Q gi|254781051|r 764 CTSPANYFHILRRQIYDRS-------SRPLIMMAPKSLLRHK 798 (957)
Q Consensus 764 ~ttpAq~FH~LRRQ~~r~~-------rkPLiv~tPKsLLR~~ 798 (957)
...|..+|.+||++---+| -.-+|-.||..|+|..
T Consensus 217 ~~d~~~~~~~lr~~np~~~~f~~~~~~~~~iGaSPE~Lv~~~ 258 (450)
T 2g5f_A 217 AIDFPLTYRLGRRHNTPVRSFLLQLGGIRALGYSPELVTAVR 258 (450)
T ss_dssp CBCHHHHHHHHHTTCCCSEEEEEEETTEEEEEEECCEEEEEC
T ss_pred CCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEECHHHHHHCC
T ss_conf 899899999997569996188983799789998736861035
No 104
>2omo_A DUF176; structural genomics, APC6266, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.83A {Nitrosomonas europaea} SCOP: d.58.4.11
Probab=25.80 E-value=11 Score=15.81 Aligned_cols=29 Identities=17% Similarity=0.291 Sum_probs=20.9
Q ss_pred ECCCCCCCHHHHHHCCCCCCCCCCEEECC
Q ss_conf 24311110134320221138653111000
Q gi|254781051|r 669 NSFLSEQAVLGFEYGYSLNNLNALTIWEA 697 (957)
Q Consensus 669 nS~LSE~avlgFEyGys~~~p~~L~iWEA 697 (957)
-..+.|-|++.|+...+.++|+.++++|.
T Consensus 49 ~~s~~EpGcl~y~l~~~~~dp~~~~~~E~ 77 (124)
T 2omo_A 49 EQSIREPGNMRFDILQSADDPTRFVLYEA 77 (124)
T ss_dssp HHHTTSTTEEEEEEEEESSCTTEEEEEEE
T ss_pred HHHHCCCCEEEEEEEECCCCCCEEEEEEE
T ss_conf 99857999079999965899977999999
No 105
>1qdl_A Protein (anthranilate synthase (TRPE-subunit)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: d.161.1.1
Probab=25.64 E-value=6.8 Score=17.23 Aligned_cols=32 Identities=28% Similarity=0.307 Sum_probs=14.5
Q ss_pred CHHHHHHHHHHHHCCCC-------CCCEEEECCCHHHCC
Q ss_conf 89999999999743534-------886898566022108
Q gi|254781051|r 766 SPANYFHILRRQIYDRS-------SRPLIMMAPKSLLRH 797 (957)
Q Consensus 766 tpAq~FH~LRRQ~~r~~-------rkPLiv~tPKsLLR~ 797 (957)
.|..+|..||+.--.+| -.-++-.||-.|++.
T Consensus 193 ~p~~~~~~Lr~~~p~py~~~~~~~~~~~~gaSPE~l~~~ 231 (422)
T 1qdl_A 193 DPLRIYYNLRRINPSPYMFYLKFDEKYLIGSSPELLFRV 231 (422)
T ss_dssp CTHHHHHHHHHHSCCSEEEEEEETTEEEEEEESCEEEEE
T ss_pred CHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCHHHEEE
T ss_conf 979999999976899726886057865996375686474
No 106
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=25.06 E-value=24 Score=13.04 Aligned_cols=74 Identities=15% Similarity=0.363 Sum_probs=49.3
Q ss_pred EEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCCEEEECCCCHH
Q ss_conf 04788862575333467258876451067744365799984160201247010246778400112203405874267889
Q gi|254781051|r 369 RVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIPIFHVNGDDPE 448 (957)
Q Consensus 369 ~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aPI~HVN~DdpE 448 (957)
+++-|||=|=..|.|+-++-+-+.- ||. |++++ -+|...+.. .-++-++..+..|++
T Consensus 3 ~m~KIlItGatG~iG~~l~~~Ll~~----g~~----V~~l~-------R~~~~~~~~--------~~~~~~i~~D~~d~~ 59 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNR----GFE----VTAVV-------RHPEKIKIE--------NEHLKVKKADVSSLD 59 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTT----TCE----EEEEC-------SCGGGCCCC--------CTTEEEECCCTTCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC----CCE----EEEEE-------CCHHHCCCC--------CCCEEEEECCCCCHH
T ss_conf 9999999889988999999999978----498----99998-------684762224--------662377613555466
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 99999999999999738973998642
Q gi|254781051|r 449 AVIRVVRMAVSFRMKFHKSVVIDIVC 474 (957)
Q Consensus 449 av~~~~~lA~~yR~~F~kDVvIDlv~ 474 (957)
++..+++ +.|+||..++
T Consensus 60 ~l~~~~~---------~~d~vi~~~~ 76 (227)
T 3dhn_A 60 EVCEVCK---------GADAVISAFN 76 (227)
T ss_dssp HHHHHHT---------TCSEEEECCC
T ss_pred HHHHHHC---------CCCCCEEECC
T ss_conf 6898860---------7751103414
No 107
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium LT2}
Probab=24.82 E-value=18 Score=14.01 Aligned_cols=25 Identities=24% Similarity=0.311 Sum_probs=13.8
Q ss_pred CCCCCCCHHHHHHHCCCCCEEEEEC
Q ss_conf 7656440578875214378269724
Q gi|254781051|r 740 PEHSSARLERFLQMCAENNMYVANC 764 (957)
Q Consensus 740 PEHSSaRlERfLQl~a~~N~~V~~~ 764 (957)
|+.+..+|+|||=+|...|+.++.+
T Consensus 142 p~~~~~~idR~Lv~a~~~~i~pvIv 166 (358)
T 2rcn_A 142 PELSLNIIDRYLVGCETLQVEPLIV 166 (358)
T ss_dssp TTCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 9889889999846998879968999
No 108
>3mcs_A Putative monooxygenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.55A {Fusobacterium nucleatum subsp}
Probab=24.61 E-value=13 Score=15.19 Aligned_cols=24 Identities=29% Similarity=0.203 Sum_probs=12.7
Q ss_pred CCCCHHHHHHCCCCCCCCCCEEEC
Q ss_conf 111013432022113865311100
Q gi|254781051|r 673 SEQAVLGFEYGYSLNNLNALTIWE 696 (957)
Q Consensus 673 SE~avlgFEyGys~~~p~~L~iWE 696 (957)
+|-|++.|++..+.++|+..++||
T Consensus 37 ~EpG~l~y~~~~~~~~p~~~~~~E 60 (219)
T 3mcs_A 37 VEQGVLGLFAATDERDKTTSYIVE 60 (219)
T ss_dssp HCSSEEEEEEEEECSSSCEEEEEE
T ss_pred CCCCEEEEEEEECCCCCCEEEEEE
T ss_conf 798958999997589995899999
No 109
>2qj8_A MLR6093 protein; NP_106651.1, uncharacterized protein MLR6093, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.00A {Mesorhizobium loti MAFF303099}
Probab=24.40 E-value=25 Score=12.95 Aligned_cols=96 Identities=14% Similarity=0.163 Sum_probs=57.1
Q ss_pred EEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEE-ECCCEECCCCCHHCCCCCC-CCHHHHHHCCCEEEECCCCH
Q ss_conf 478886257533346725887645106774436579998-4160201247010246778-40011220340587426788
Q gi|254781051|r 370 VLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLI-INNQIGFTTNPSSARSCTY-ASDISKSIGIPIFHVNGDDP 447 (957)
Q Consensus 370 vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiV-vNNQIGFTT~p~d~RSs~Y-~TDiAK~i~aPI~HVN~Ddp 447 (957)
++-=-|||| -.+|.=++...+.. |+.-..-|+|-+| +=|-+||-..- |.... -+|+-+++.- ..++...
T Consensus 49 ~i~agiHGn-E~~G~~~~~~L~~~--l~~~~~~g~v~~vp~~Np~a~~~~~---R~~p~d~~dlNR~fpg---~~~g~~~ 119 (332)
T 2qj8_A 49 LITGGNHGN-ELQGPILARRLVKW--LPEAQRCGRIIIVPEINPLAVQAWT---RNTPIDGKNLNRVFPG---RSDGSVS 119 (332)
T ss_dssp EEEECSSTT-CCHHHHHHHHHHHH--HHHHBCSEEEEEESCSCHHHHHHTC---SSCTTTCCCTTTTTTC---CTTSCHH
T ss_pred EEECCCCCC-CHHHHHHHHHHHHH--CCCCCCCCEEEEEEECCHHHHHCCC---CCCCCCCCCHHHHCCC---CCCCCHH
T ss_conf 998572678-57899999999970--7200258439999706989996067---4677888663442679---8777706
Q ss_pred HHHHHHHHHHHHHHH-HHCCCEEEEEEECCCCC
Q ss_conf 999999999999999-73897399864211256
Q gi|254781051|r 448 EAVIRVVRMAVSFRM-KFHKSVVIDIVCYRRFG 479 (957)
Q Consensus 448 Eav~~~~~lA~~yR~-~F~kDVvIDlv~YRr~G 479 (957)
|.... ..++. --..|++|||-|.....
T Consensus 120 e~~a~-----~~~~~~~~~aD~~iDLHs~~~~~ 147 (332)
T 2qj8_A 120 ERIAD-----AISRLLLPVVDTVLDLHSFGPTW 147 (332)
T ss_dssp HHHHH-----HHHHHTGGGCSEEEEEEEEETTE
T ss_pred HHHHH-----HHHHHCCCCCCEEEECCCCCCCC
T ss_conf 79999-----99752233466999846786531
No 110
>3os6_A Isochorismate synthase DHBC; structural genomics, center for structural genomics of infec diseases, csgid, isomerase; HET: MSE 15P; 2.40A {Bacillus anthracis}
Probab=24.31 E-value=13 Score=15.04 Aligned_cols=11 Identities=9% Similarity=0.150 Sum_probs=4.8
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999997
Q gi|254781051|r 767 PANYFHILRRQ 777 (957)
Q Consensus 767 pAq~FH~LRRQ 777 (957)
|..+|.-||++
T Consensus 159 ~~~l~~~L~~~ 169 (399)
T 3os6_A 159 KQKLLRELAEH 169 (399)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
T ss_conf 99999999864
No 111
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8
Probab=24.29 E-value=25 Score=12.94 Aligned_cols=29 Identities=31% Similarity=0.536 Sum_probs=22.1
Q ss_pred CCCCCCCCCHHHHHHHCCCCCEEEEECCC
Q ss_conf 88765644057887521437826972488
Q gi|254781051|r 738 QGPEHSSARLERFLQMCAENNMYVANCTS 766 (957)
Q Consensus 738 qGPEHSSaRlERfLQl~a~~N~~V~~~tt 766 (957)
.-|+-+..+|+|||-++...|+.++.+=|
T Consensus 97 ~~P~~~~~~idR~Lv~a~~~~i~~vivln 125 (307)
T 1t9h_A 97 VQPSFSTALLDRFLVLVEANDIQPIICIT 125 (307)
T ss_dssp TTTTCCHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 68878899999999999987994899996
No 112
>2fn0_A Salicylate synthetase, IRP9; salicylate synthase, siderophore, transcription; 1.85A {Yersinia enterocolitica} SCOP: d.161.1.1 PDB: 2fn1_A*
Probab=24.29 E-value=12 Score=15.52 Aligned_cols=25 Identities=8% Similarity=0.077 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 5899999999999873791079980
Q gi|254781051|r 244 EVIIPAIEEIIRQGVQQGVDEMILG 268 (957)
Q Consensus 244 EslIP~L~~ii~~a~~~Gv~eiviG 268 (957)
|.-.-++..+++.-....+.+||+.
T Consensus 176 e~y~~~V~~a~~~I~~G~l~KvVLs 200 (437)
T 2fn0_A 176 EAYKQQVARAVAEIRRGEYVKVIVS 200 (437)
T ss_dssp HHHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 9999999999999977998699979
No 113
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=24.16 E-value=25 Score=12.92 Aligned_cols=37 Identities=16% Similarity=0.310 Sum_probs=16.5
Q ss_pred CCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECC
Q ss_conf 68135436888888876564405788752143782697248
Q gi|254781051|r 725 SNLVCLLPHGYEGQGPEHSSARLERFLQMCAENNMYVANCT 765 (957)
Q Consensus 725 sglvllLPHGyeGqGPEHSSaRlERfLQl~a~~N~~V~~~t 765 (957)
.|.|+|| ||+-| ||..+ +++-+-+...+..+.|+.|-
T Consensus 4 ~~~Vv~~-HG~~~-~~~~~--~~~~la~~l~~~G~~v~~~d 40 (176)
T 2qjw_A 4 RGHCILA-HGFES-GPDAL--KVTALAEVAERLGWTHERPD 40 (176)
T ss_dssp SCEEEEE-CCTTC-CTTSH--HHHHHHHHHHHTTCEEECCC
T ss_pred CCEEEEE-CCCCC-CCCCH--HHHHHHHHHHHCCCEEEEEC
T ss_conf 8889998-99888-97747--99999999997899899935
No 114
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=23.91 E-value=24 Score=13.13 Aligned_cols=26 Identities=15% Similarity=0.087 Sum_probs=14.3
Q ss_pred CCCCCCCCHHHHHHHCCCCCEEEEEC
Q ss_conf 87656440578875214378269724
Q gi|254781051|r 739 GPEHSSARLERFLQMCAENNMYVANC 764 (957)
Q Consensus 739 GPEHSSaRlERfLQl~a~~N~~V~~~ 764 (957)
.|+.+..+|+|||-+|...++.++..
T Consensus 91 ~P~~~~~~idR~Lv~a~~~gi~~viv 116 (302)
T 2yv5_A 91 MPEFNNYLLDNMLVVYEYFKVEPVIV 116 (302)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 98899899999999998749976999
No 115
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GTT GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=23.78 E-value=8.2 Score=16.64 Aligned_cols=17 Identities=6% Similarity=-0.156 Sum_probs=7.2
Q ss_pred HCCCCCCCCCEEEEEEC
Q ss_conf 10677443657999841
Q gi|254781051|r 394 SGLSGYTVAGNIHLIIN 410 (957)
Q Consensus 394 s~l~gY~tGGTiHiVvN 410 (957)
-.+||.+-|...-++-+
T Consensus 105 i~TPGHT~gsv~~~~~~ 121 (260)
T 1qh5_A 105 LATPCHTSGHICYFVSK 121 (260)
T ss_dssp EECCSSSTTCEEEEEEC
T ss_pred EEECCCCCCCEEEEECC
T ss_conf 98458888857899847
No 116
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=23.63 E-value=26 Score=12.85 Aligned_cols=73 Identities=16% Similarity=0.239 Sum_probs=48.8
Q ss_pred EEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCCEEEECCCCHHHHHH
Q ss_conf 88625753334672588764510677443657999841602012470102467784001122034058742678899999
Q gi|254781051|r 373 LIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIPIFHVNGDDPEAVIR 452 (957)
Q Consensus 373 iliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aPI~HVN~DdpEav~~ 452 (957)
|+|=|=.-|.|+-++.+-+. .||. |++++-| |..... +.. -++-++-.+-.|++++..
T Consensus 6 IlV~GatG~iG~~l~~~ll~----~g~~----V~~~~R~-------~~~~~~-----~~~--~~~~~v~~D~~d~~~l~~ 63 (206)
T 1hdo_A 6 IAIFGATGQTGLTTLAQAVQ----AGYE----VTVLVRD-------SSRLPS-----EGP--RPAHVVVGDVLQAADVDK 63 (206)
T ss_dssp EEEESTTSHHHHHHHHHHHH----TTCE----EEEEESC-------GGGSCS-----SSC--CCSEEEESCTTSHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHH----CCCE----EEEEECC-------HHHCCC-----CCC--CCCEEEEECCCHHHHHHH
T ss_conf 99999986899999999997----8698----9999848-------365654-----335--661589602433678999
Q ss_pred HHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf 999999999973897399864211
Q gi|254781051|r 453 VVRMAVSFRMKFHKSVVIDIVCYR 476 (957)
Q Consensus 453 ~~~lA~~yR~~F~kDVvIDlv~YR 476 (957)
+.+ +.|+||.+++.+
T Consensus 64 a~~---------~~d~Vi~~~g~~ 78 (206)
T 1hdo_A 64 TVA---------GQDAVIVLLGTR 78 (206)
T ss_dssp HHT---------TCSEEEECCCCT
T ss_pred HHC---------CCCEEEEEECCC
T ss_conf 976---------997999971368
No 117
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=23.55 E-value=26 Score=12.84 Aligned_cols=67 Identities=19% Similarity=0.398 Sum_probs=39.6
Q ss_pred EEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCCEEEECCCCHHHH
Q ss_conf 78886257533346725887645106774436579998416020124701024677840011220340587426788999
Q gi|254781051|r 371 LPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIPIFHVNGDDPEAV 450 (957)
Q Consensus 371 lpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aPI~HVN~DdpEav 450 (957)
|-|||=|=+-|.|+-++-+-+ . .| |+|+ .+.|+..++-|+ .|++.+
T Consensus 1 MKILItG~tGfIG~~l~~~L~-----~----~g--~~v~----------~~~~~~~~~~Dl-------------~d~~~~ 46 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-----P----VG--NLIA----------LDVHSKEFCGDF-------------SNPKGV 46 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-----T----TS--EEEE----------ECTTCSSSCCCT-------------TCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH-----H----CC--CEEE----------EECCCCCCCCCC-------------CCHHHH
T ss_conf 969998999889999999998-----6----89--9999----------978985431768-------------899999
Q ss_pred HHHHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 9999999999997389739986421125
Q gi|254781051|r 451 IRVVRMAVSFRMKFHKSVVIDIVCYRRF 478 (957)
Q Consensus 451 ~~~~~lA~~yR~~F~kDVvIDlv~YRr~ 478 (957)
-.+.+ .++-|+||.+.++-..
T Consensus 47 ~~~l~-------~~kpD~Vih~Aa~~~~ 67 (299)
T 1n2s_A 47 AETVR-------KLRPDVIVNAAAHTAV 67 (299)
T ss_dssp HHHHH-------HHCCSEEEECCCCCCH
T ss_pred HHHHH-------HCCCCEEEECCCCCCC
T ss_conf 99999-------7599899975422433
No 118
>1q52_A MENB; lyase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.14.1.3 PDB: 1q51_A 1rjm_A* 1rjn_A*
Probab=23.45 E-value=26 Score=12.83 Aligned_cols=56 Identities=16% Similarity=0.282 Sum_probs=36.2
Q ss_pred CCCCCCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC
Q ss_conf 55100150268898359618999717877310004455323677776416665445556544540478886257
Q gi|254781051|r 305 GDVKYHLGLCCNRQICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHGD 378 (957)
Q Consensus 305 GDVKYHLG~s~~~~~~g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~~~d~~~~~~~~~~~~~~vlpiliHGD 378 (957)
-|+.||. ..+++-.+|+| +||..+-+.|+-.+-.....-+.... ...|-.|+|.|.
T Consensus 35 ~di~~~~------~~ddgVa~ItL-NrP~~~NAl~~~m~~eL~~al~~~~~-----------d~~vrvvVltG~ 90 (314)
T 1q52_A 35 TDITYHR------HVDDATVRVAF-NRPEVRNAFRPHTVDELYRVLDHARM-----------SPDVGVVLLTGN 90 (314)
T ss_dssp SSEEEEE------ESSSSEEEEEE-CCGGGTTCCCHHHHHHHHHHHHHHHH-----------CTTCCEEEEEEC
T ss_pred CCEEEEE------EEECCEEEEEE-CCCCCCCCCCHHHHHHHHHHHHHHHH-----------CCCCCEEEEECC
T ss_conf 5169999------73399899995-58775689899999999999999974-----------999758999578
No 119
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metallo peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis atcc 367}
Probab=23.07 E-value=27 Score=12.77 Aligned_cols=31 Identities=16% Similarity=0.217 Sum_probs=27.9
Q ss_pred CCHHHHHHHCCCCCEEEEECCCHHHHHHHHH
Q ss_conf 4057887521437826972488999999999
Q gi|254781051|r 745 ARLERFLQMCAENNMYVANCTSPANYFHILR 775 (957)
Q Consensus 745 aRlERfLQl~a~~N~~V~~~ttpAq~FH~LR 775 (957)
.||||.-+..+++|+-.+..|.|+|++-+--
T Consensus 4 ~Rl~kl~~~m~~~~lD~~li~~~~ni~YlTG 34 (140)
T 3i7m_A 4 TKLEQIQQWTAQHHASMTYLSNPKTIEYLTG 34 (140)
T ss_dssp CHHHHHHHHHHHTTCSEEEECCHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCEEEECCHHHCCCCCC
T ss_conf 9999999999986999999846402011237
No 120
>3hwo_A Isochorismate synthase ENTC; chorismate-utilizing enzymes, siderophore, enterobactin, enterobactin biosynthesis, ION transport, iron; HET: ISC; 2.30A {Escherichia coli}
Probab=22.94 E-value=15 Score=14.73 Aligned_cols=12 Identities=17% Similarity=0.083 Sum_probs=5.3
Q ss_pred CHHHHHHHHHHH
Q ss_conf 899999999997
Q gi|254781051|r 766 SPANYFHILRRQ 777 (957)
Q Consensus 766 tpAq~FH~LRRQ 777 (957)
.|.++|.-||+|
T Consensus 166 d~~~ll~~L~~~ 177 (394)
T 3hwo_A 166 DSGVLLERLIAQ 177 (394)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
T ss_conf 999999999864
No 121
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=22.65 E-value=27 Score=12.71 Aligned_cols=175 Identities=15% Similarity=0.075 Sum_probs=93.3
Q ss_pred HHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCC-------------------------CEEEEECCCHHHHHHHH
Q ss_conf 62333681354368888888765644057887521437-------------------------82697248899999999
Q gi|254781051|r 720 KWLCTSNLVCLLPHGYEGQGPEHSSARLERFLQMCAEN-------------------------NMYVANCTSPANYFHIL 774 (957)
Q Consensus 720 KW~~~sglvllLPHGyeGqGPEHSSaRlERfLQl~a~~-------------------------N~~V~~~ttpAq~FH~L 774 (957)
|=.....|+-.++-||-.- |-| .++|..+++. .--..|..|+.++|.++
T Consensus 12 k~~~~~ali~y~taG~P~~--~~~----~~~l~~l~~~GaD~iEiGiPfSDP~aDGpvIq~a~~~al~~g~~~~~~~~~~ 85 (268)
T 1qop_A 12 NDRREGAFVPFVTLGDPGI--EQS----LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEML 85 (268)
T ss_dssp HHTTCCEEEEEEETTSSCH--HHH----HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHCCCCEEEEEEECCCCCH--HHH----HHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 8749936898881707987--999----9999999977999999789888865447999999999997898679987678
Q ss_pred HHHHCCCCCCCEEEECCCHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHH
Q ss_conf 99743534886898566022108012688789379986035157764334445444579545768998688578999999
Q gi|254781051|r 775 RRQIYDRSSRPLIMMAPKSLLRHKRVVSSLSDMTCGSVFQAVLSDDAEYHGKTSVKLKEDSHIRRVILCTGKVYYDLLDN 854 (957)
Q Consensus 775 RRQ~~r~~rkPLiv~tPKsLLR~~~a~S~l~d~~~g~~F~~vi~d~~~~~~~~~~~~~~~~~v~rvi~csGKvyydL~~~ 854 (957)
++.-......|||+|+=-..+.+.-.-.-+++...-..---+|||-. ++ -.-++.+.
T Consensus 86 ~~~r~~~~~~plvlm~Y~N~i~~~G~~~f~~~~~~~Gv~GliipDlp------------~e-----------e~~~~~~~ 142 (268)
T 1qop_A 86 AIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVP------------VE-----------ESAPFRQA 142 (268)
T ss_dssp HHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCC------------GG-----------GCHHHHHH
T ss_pred HHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEECCCCC------------HH-----------HHHHHHHH
T ss_conf 87653178877899985251123787899999997498666515888------------56-----------66999999
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 997699868999840148682899999985379983998067853178457899769999875056776018975
Q gi|254781051|r 855 RDMRNIADIYLLRIEQLYPFPEDYLIKVLSRFVQAEIVWCQEEPQNMGAWTFIEPYLEKVLHSIGADYSRVRYVG 929 (957)
Q Consensus 855 r~~~~~~~vaivRiEqLyPfP~~~l~~~l~~y~~~e~vW~QEEp~N~GaW~~v~~rl~~~l~~~~~~~~~~~y~g 929 (957)
-.+.+...|-+|. ...|.+.+..+.+.= ..|+.|+==+-=-|+=..+.+.+.+.+..++......-++|
T Consensus 143 ~~~~~l~~I~lva----Ptt~~~ri~~i~~~s--~gFiY~vs~~GvTG~~~~~~~~~~~~i~~ik~~t~~Pv~vG 211 (268)
T 1qop_A 143 ALRHNIAPIFICP----PNADDDLLRQVASYG--RGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQG 211 (268)
T ss_dssp HHHTTCEEECEEC----TTCCHHHHHHHHHHC--CSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEE
T ss_pred HHHCCCCEEEEEE----CCCCHHHHHHHHHCC--CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEE
T ss_conf 9735982699982----689778899987259--86478710346787654310568999999975468883576
No 122
>1jwq_A N-acetylmuramoyl-L-alanine amidase CWLV; open alpha-beta-alpha, hydrolase; 1.80A {Paenibacillus polymyxa} SCOP: c.56.5.6
Probab=22.63 E-value=27 Score=12.71 Aligned_cols=26 Identities=8% Similarity=-0.006 Sum_probs=10.5
Q ss_pred HHHHHCCCEEEEEECCCCHHHHHHHH
Q ss_conf 99840643027772489989999999
Q gi|254781051|r 169 LSHLYCSNIGVEFMHIVDSIERDWVR 194 (957)
Q Consensus 169 L~~tYCgsIGvEymHI~d~eer~Wlq 194 (957)
|+.+.|-+|=+|.-.|+|+++..||.
T Consensus 131 Lr~t~~PavLvE~~f~sN~~D~~~l~ 156 (179)
T 1jwq_A 131 IRETTMPAVLLEVGYLSNAKEEATLF 156 (179)
T ss_dssp HHSCSSCEEEEEEEETTSHHHHHHHT
T ss_pred ECCCCCCEEEEEEECCCCHHHHHHHC
T ss_conf 62789981899960679989999864
No 123
>2c46_A MRNA capping enzyme; guanylyltransferase, phosphatase, transferase, alternative splicing, hydrolase, mRNA processing, multifunctional enzyme; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=22.62 E-value=23 Score=13.29 Aligned_cols=13 Identities=23% Similarity=0.424 Sum_probs=4.5
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254781051|r 448 EAVIRVVRMAVSF 460 (957)
Q Consensus 448 Eav~~~~~lA~~y 460 (957)
|.+...+++.-+|
T Consensus 123 e~i~~F~~~v~~f 135 (241)
T 2c46_A 123 ENTETFIRLCERF 135 (241)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999
No 124
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=22.46 E-value=27 Score=12.69 Aligned_cols=13 Identities=15% Similarity=0.066 Sum_probs=5.5
Q ss_pred HHHCCCCEEEEECC
Q ss_conf 87379107998067
Q gi|254781051|r 257 GVQQGVDEMILGMA 270 (957)
Q Consensus 257 a~~~Gv~eiviGMa 270 (957)
|+..|+..|+. ||
T Consensus 31 a~~gG~t~v~~-MP 43 (347)
T 2z26_A 31 YTSEIYGRAIV-MP 43 (347)
T ss_dssp HHHTTCSEEEE-CC
T ss_pred HHHCCCCEEEE-CC
T ss_conf 98364899998-99
No 125
>2bbe_A Hypothetical protein SO0527; MCSG, structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 1.97A {Shewanella oneidensis mr-1}
Probab=22.43 E-value=16 Score=14.46 Aligned_cols=30 Identities=17% Similarity=0.204 Sum_probs=20.5
Q ss_pred EECCCCCCCHHHHHHCCCCCCCCCCEEECC
Q ss_conf 824311110134320221138653111000
Q gi|254781051|r 668 VNSFLSEQAVLGFEYGYSLNNLNALTIWEA 697 (957)
Q Consensus 668 ~nS~LSE~avlgFEyGys~~~p~~L~iWEA 697 (957)
.....+|-|+++|++-.+..+|+.+++||-
T Consensus 38 ~~~~~~epGcl~y~~~~~~~~~~~~~~~E~ 67 (108)
T 2bbe_A 38 IPDTRREAGCIRYELNVSRDEPRRVTFVEK 67 (108)
T ss_dssp HHHHHTSTTEEEEEEEECSSSTTEEEEEEE
T ss_pred HHHHHCCCCEEEEEEEECCCCCCEEEEEEE
T ss_conf 899846999089999975899977999988
No 126
>2r6i_A AGR_C_2717P, uncharacterized protein ATU1473; chaperone, structural genomics, APC6123, PSI-2, protein structure initiative; 2.59A {Agrobacterium tumefaciens str} SCOP: d.381.1.1
Probab=22.17 E-value=16 Score=14.35 Aligned_cols=22 Identities=27% Similarity=0.385 Sum_probs=15.2
Q ss_pred CCHHHHHHHHHCCCHHHHHHHHC-CCC
Q ss_conf 55268999885379899999855-887
Q gi|254781051|r 272 RGRLNVLSQIMNKLPRSIFYEFK-GKG 297 (957)
Q Consensus 272 RGRLNVL~Nvl~Kp~~~iF~EF~-g~~ 297 (957)
-||-|.-+. +.++||.++. |.+
T Consensus 12 ~~~~~~~~~----~mr~~~~~~~~~~~ 34 (284)
T 2r6i_A 12 SGRENLYFQ----GMRDLLNDLSEGLS 34 (284)
T ss_dssp ---CHHHHH----HHHHHHHHHHTGGG
T ss_pred CCHHHHHHC----CHHHHHHHHCCCCC
T ss_conf 405788751----08999864434668
No 127
>3kkf_A Putative antibiotic biosynthesis monooxygenase; structural genomics, joint center for structural genomics, JCSG; HET: MSE P6G; 1.30A {Bacteroides thetaiotaomicron}
Probab=21.60 E-value=16 Score=14.50 Aligned_cols=29 Identities=28% Similarity=0.086 Sum_probs=20.0
Q ss_pred ECCCCCCCHHHHHHCCCCCCCCCCEEECC
Q ss_conf 24311110134320221138653111000
Q gi|254781051|r 669 NSFLSEQAVLGFEYGYSLNNLNALTIWEA 697 (957)
Q Consensus 669 nS~LSE~avlgFEyGys~~~p~~L~iWEA 697 (957)
.|.-+|-|++.|+..-+.++|+..+++|-
T Consensus 32 ~s~~~EpGcl~y~~~~d~~~p~~~~~~E~ 60 (105)
T 3kkf_A 32 VSMRLEPGVLVLYAVAEKERPNHVTILEI 60 (105)
T ss_dssp HHHHHCTTEEEEEEEECSSCTTEEEEEEE
T ss_pred HHHHCCCCCEEEEEEECCCCCCEEEEEEE
T ss_conf 88736999379999952799988999999
No 128
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif, structural genomics; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=21.60 E-value=28 Score=12.57 Aligned_cols=36 Identities=14% Similarity=-0.058 Sum_probs=17.8
Q ss_pred CCCEEECCCC--CCCCCCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 1715725665--7877778999999999840643027772
Q gi|254781051|r 145 YDRKICMKGV--LGLESATIPEIVDVLSHLYCSNIGVEFM 182 (957)
Q Consensus 145 Ld~~f~~~~~--~g~~~~tL~eIi~~L~~tYCgsIGvEym 182 (957)
|.+.++.+.. .-....+++|.++..++. |==|+|+.
T Consensus 13 ~~~~~~~g~~~~~~p~~l~~~e~l~~a~~~--Gfd~iEl~ 50 (295)
T 3cqj_A 13 LSKQIPLGIYEKALPAGECWLERLQLAKTL--GFDFVEMS 50 (295)
T ss_dssp ---CCCEEEEGGGSCCCSCHHHHHHHHHHT--TCSEEEEE
T ss_pred CCCCCCCEEEHHHCCCCCCHHHHHHHHHHC--CCCEEEEE
T ss_conf 034121433351258998999999999982--99989996
No 129
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=21.50 E-value=28 Score=12.55 Aligned_cols=33 Identities=15% Similarity=0.100 Sum_probs=22.4
Q ss_pred ECCCCHHHHHHHHHHHHHHHHHHCCCEE-EEEEE
Q ss_conf 4267889999999999999997389739-98642
Q gi|254781051|r 442 VNGDDPEAVIRVVRMAVSFRMKFHKSVV-IDIVC 474 (957)
Q Consensus 442 VN~DdpEav~~~~~lA~~yR~~F~kDVv-IDlv~ 474 (957)
.|-+.|+..-+...-+.-|..+|+-|=+ +|++.
T Consensus 306 ~n~~~~~vr~~i~d~~~~W~~ey~iDGfR~D~~~ 339 (657)
T 2wsk_A 306 LNLSHPAVVDYASACLRYWVETCHVDGFRFDLAA 339 (657)
T ss_dssp BCTTSHHHHHHHHHHHHHHHHTTCCCEEEETTTH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHH
T ss_conf 4558889999999999877654377652354654
No 130
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=21.02 E-value=29 Score=12.48 Aligned_cols=83 Identities=11% Similarity=0.134 Sum_probs=55.2
Q ss_pred EEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCEECCCCCHHCCCCCCCCHHHHHHCCCEEEECCCCHH
Q ss_conf 04788862575333467258876451067744365799984160201247010246778400112203405874267889
Q gi|254781051|r 369 RVLPLIIHGDAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGIPIFHVNGDDPE 448 (957)
Q Consensus 369 ~vlpiliHGDAAfaGQGVV~Etl~ls~l~gY~tGGTiHiVvNNQIGFTT~p~d~RSs~Y~TDiAK~i~aPI~HVN~DdpE 448 (957)
-.|=|||=|-.-|.|+-+|..-++. || +|+.+.+++-+ + .-+.+.+..+-.|++
T Consensus 11 ~~MKILVtGatGfIG~~l~~~Ll~~----g~----~V~~~~r~~~~------------~------~~~v~~~~~Dl~d~~ 64 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQ----NV----EVFGTSRNNEA------------K------LPNVEMISLDIMDSQ 64 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT----TC----EEEEEESCTTC------------C------CTTEEEEECCTTCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC----CC----EEEEEECCCCC------------C------CCCCEEEEEECCCHH
T ss_conf 9667999678888999999999988----49----89998088712------------4------689769993368999
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCC
Q ss_conf 999999999999997389739986421125656435
Q gi|254781051|r 449 AVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGD 484 (957)
Q Consensus 449 av~~~~~lA~~yR~~F~kDVvIDlv~YRr~GHNE~D 484 (957)
.+..+.+ .++-|+||.+.++...+..+.+
T Consensus 65 ~l~~~~~-------~~~~d~v~~~a~~~~~~~~~~~ 93 (321)
T 2pk3_A 65 RVKKVIS-------DIKPDYIFHLAAKSSVKDSWLN 93 (321)
T ss_dssp HHHHHHH-------HHCCSEEEECCSCCCHHHHTTC
T ss_pred HHHHHHH-------HCCCCEEEEECCCCEECCCCCC
T ss_conf 9999998-------5799599983111100122358
No 131
>1wtj_A Ureidoglycolate dehydrogenase; NADPH dependent enzyme, oxidoreductase; 1.55A {Pseudomonas syringae PV} PDB: 2cwf_A* 2cwh_A*
Probab=20.14 E-value=30 Score=12.35 Aligned_cols=151 Identities=13% Similarity=0.061 Sum_probs=74.0
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH----------HHHHHHHH----HCCCCEEC----------
Q ss_conf 8998999999998414577888798899999999999998----------99999864----03362222----------
Q gi|254781051|r 184 IVDSIERDWVRNTIEDYDFSSNFSKEEQRDILDKLVRAEG----------FEKFIDIK----YKGAKRFG---------- 239 (957)
Q Consensus 184 I~d~eer~Wlq~riE~~~~~~~~s~eeK~~iL~~L~~Ae~----------FE~FL~~K----f~g~KRFs---------- 239 (957)
|.-.+.+++.++-++. ..++.++-..+-+.|+.|+. +..|+..= ....-+..
T Consensus 13 i~~~~l~~~~~~~l~~----~G~~~~~A~~vA~~Lv~Adl~G~~SHGl~rlp~Y~~~l~~G~i~~~a~~~i~~~~~a~~~ 88 (343)
T 1wtj_A 13 VSYPQLIDLLRRIFVV----HGTSPEVADVLAENCASAQRDGSHSHGIFRIPGYLSSLASGWVDGKAVPVVEDVGAAFVR 88 (343)
T ss_dssp ECHHHHHHHHHHHHHH----TTCCHHHHHHHHHHHHHHHHTTCGGGTGGGHHHHHHHHHTTSSCTTCCCEEEEEETTEEE
T ss_pred ECHHHHHHHHHHHHHH----CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEE
T ss_conf 7799999999999998----698999999999999999748973750989999999998699889874279954884699
Q ss_pred CCCHH-----HHHHHHHHHHHHHHHCCCCEEEEE-CCCCCHHHHHHHHHCCCHHHHHHHHCC----CCCCCCCCCCCCCC
Q ss_conf 56465-----899999999999873791079980-676552689998853798999998558----87432234555100
Q gi|254781051|r 240 ADGSE-----VIIPAIEEIIRQGVQQGVDEMILG-MAHRGRLNVLSQIMNKLPRSIFYEFKG----KGPSEKEYSGDVKY 309 (957)
Q Consensus 240 LEG~E-----slIP~L~~ii~~a~~~Gv~eiviG-MaHRGRLNVL~Nvl~Kp~~~iF~EF~g----~~~~~~~~sGDVKY 309 (957)
++|.- +.--+++..|++|.+.|+--|.+- --|-|+|..-+.-+-+- -+-| +.+......|-.+=
T Consensus 89 vDg~~g~G~~a~~~a~~~aiekAk~~Gi~~v~v~ns~H~G~~g~y~~~aa~~------Gligi~~tn~~~~vap~Gg~~~ 162 (343)
T 1wtj_A 89 VDACNGFAQPALAAARSLLIDKARSAGVAILAIRGSHHFAALWPDVEPFAEQ------GLVALSMVNSMTCVVPHGARQP 162 (343)
T ss_dssp EECTTSBHHHHHHHHHHHHHHHHHHHSEEEEEEEEEECCSCSHHHHHHHHHT------TCEEEEECCCCSCBCCTTCSSC
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHC------CCEEEECCCCCCCCCCCCCCCC
T ss_conf 8377521679999999999999997396389962677412149999999976------8758960798863113687675
Q ss_pred CCCEEEE---EEEC-CCEEEEEECCCCCCCHHCCHHHHHHHHHHHHH
Q ss_conf 1502688---9835-96189997178773100044553236777764
Q gi|254781051|r 310 HLGLCCN---RQIC-GKDVKLLLQSNPSHLEFVDPVVIGSVRARQDL 352 (957)
Q Consensus 310 HLG~s~~---~~~~-g~~v~lsL~~NPSHLEaVnPVv~G~~RAkQd~ 352 (957)
=||..-- ..+. +..+-+.+ |-..|..||++-....
T Consensus 163 ~lGTNPia~a~P~~~~~p~vlDm--------AtS~va~gki~~a~~~ 201 (343)
T 1wtj_A 163 LFGTNPIAFGAPRAGGEPIVFDL--------ATSAIAHGDVQIAARE 201 (343)
T ss_dssp CBCCCCEEEEEEETTEEEEEEEE--------CSBSSCHHHHHHHHHT
T ss_pred CCCCCCEEEECCCCCCCCEEEEE--------CCCHHHCCHHHHHHHC
T ss_conf 20479738973578999758871--------3463330079999971
No 132
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=20.08 E-value=23 Score=13.23 Aligned_cols=12 Identities=33% Similarity=0.517 Sum_probs=7.9
Q ss_pred HHHHHHHCCCHH
Q ss_conf 888867189989
Q gi|254781051|r 493 MYKTIRSHKSVL 504 (957)
Q Consensus 493 mY~~I~~hp~v~ 504 (957)
|-++.++||++.
T Consensus 451 ~v~R~rnHPSI~ 462 (1032)
T 2vzs_A 451 EAERLRDHPSVI 462 (1032)
T ss_dssp HHHHHTTCTTBC
T ss_pred HHHHCCCCCEEE
T ss_conf 999737978799
Done!