RPSBLAST alignment of GI: 254781051 and protein with PDBid: 1umd
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A* Length = 367
Score = 77.3 bits (189), Expect = 1e-14
Identities = 54/350 (15%), Positives = 110/350 (31%), Gaps = 40/350 (11%)
Query: 201 DFSSNFSKEEQRDILDKLVRAEGFEKFIDIKYKGAKRFG---ADGSEVIIPAIEEIIRQG 257
DF + E+ R + ++ A ++ I + K A G E AI IR G
Sbjct: 28 DFPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPG 87
Query: 258 VQQGVDEMILGMAHRGRLNVLSQIMNKLPRSIFYEFKGKGPSEKEYSGDVKYHLGLCCNR 317
+ + +R L+ + + + + D + +
Sbjct: 88 -----FDWVFPY-YRDHGLALA--LGIPLKELLGQMLA-------TKADPNKGRQMPEHP 132
Query: 318 QICGKDVKLLLQSNPSHLEFVDPVVIGSVRARQDLKAGIVGEKSISLVERSRVLPLIIHG 377
+ + S + P G+ + + L+ G V +
Sbjct: 133 GSKALNF----FTVASPIASHVPPAAGAAISMKLLRTGQVA---------------VCTF 173
Query: 378 DAAFAGQGIVSETFGLSGLSGYTVAGNIHLIINNQIGFTTNPSSARSCTYASDISKSIGI 437
+G + + G + + NN + + +D + + GI
Sbjct: 174 GDGATSEGDWYAGINFAAVQGAP---AVFIAENNFYAISVDYRHQTHSPTIADKAHAFGI 230
Query: 438 PIFHVNGDDPEAVIRVVRMAVSFRMKFHKSVVIDIVCYRRFGHNEGDEPSFTQPMMYKTI 497
P + V+G D A VV+ AV + ++++ YR H+ D+ S +P
Sbjct: 231 PGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAF 290
Query: 498 RSHKSVLQLYADSLMKNQVISKQELQSLANNWHKYLEAEYKESESYCPEK 547
K + + L + +++ + + LE KE+E P
Sbjct: 291 WRKKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGPVP 340