HHsearch alignment for GI: 254781052 and conserved domain: COG1726
>COG1726 NqrA Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA [Energy production and conversion].
Probab=93.67 E-value=0.11 Score=30.54 Aligned_cols=43 Identities=26% Similarity=0.398 Sum_probs=33.3
Q ss_pred EEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCC
Q ss_conf 99826887834897499995276245666787878999970788
Q gi|254781052|r 39 TWLKEIGESVEIGEILVELETDKVTVEVPSPVSGKLHEMSVAKG 82 (436)
Q Consensus 39 ~Wlv~~Gd~V~~gd~i~eVETDKa~~evesp~~G~l~~i~v~eG 82 (436)
T Consensus 42 ~mkV~~gD~VkkGq~LfEdKkn-pgv~~TapvsG~V~aI~RG~K 84 (447)
T COG1726 42 SMKVREGDAVKKGQVLFEDKKN-PGVVFTAPVSGKVTAIHRGEK 84 (447)
T ss_pred CCEECCCCEEECCCEEEECCCC-CCEEEECCCCCEEEEEECCCC
T ss_conf 4153347722026531121568-985894567825888644650