HHsearch alignment for GI: 254781052 and conserved domain: PRK05704
>PRK05704 dihydrolipoamide succinyltransferase; Validated.
Probab=100.00 E-value=0 Score=904.40 Aligned_cols=404 Identities=54% Similarity=0.864 Sum_probs=361.5
Q ss_pred CCEEEECCCCCCCCCEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEECCCEEEEEECC
Q ss_conf 84277768878870079999998268878348974999952762456667878789999707888855177118998345
Q gi|254781052|r 19 MATKILVPSLGESVNEATVGTWLKEIGESVEIGEILVELETDKVTVEVPSPVSGKLHEMSVAKGDTVTYGGFLGYIVEIA 98 (436)
Q Consensus 19 M~~ei~mP~lGe~m~Eg~Iv~Wlv~~Gd~V~~gd~i~eVETDKa~~evesp~~G~l~~i~v~eGd~v~VG~~i~~i~~~~ 98 (436)
T Consensus 1 M~~ei~mP~lGe~m~Eg~I~~Wlvk~GD~V~~gd~L~eVETDKa~~Ei~s~~~G~l~ki~~~eGd~v~VG~~ia~I~~~~ 80 (406)
T PRK05704 1 MSVEIKVPTLPESVTEATIATWHKKPGDAVARDEVLVEIETDKVVLEVPAPAAGVLSEILAEEGDTVTVGQVLGRIDEGA 80 (406)
T ss_pred CCCEEECCCCCCCCEEEEEEEEECCCCCEECCCCEEEEEECCCCCEEECCCCCEEEEEEEECCCCEECCCCEEEEEECCC
T ss_conf 98236679999983079998998189999789990899983862079748889899998308989966899899982688
Q ss_pred CCCCCHHHHHCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCC
Q ss_conf 54310011000112--2222222111111111122221111111122011100123211222100001110123322221
Q gi|254781052|r 99 RDEDESIKQNSPNS--TANGLPEITDQGFQMPHSPSASKLIAESGLSPSDIKGTGKRGQILKSDVMAAISRSESSVDQST 176 (436)
Q Consensus 99 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~asP~ar~la~e~gidls~v~gtG~~GrI~k~Dv~~~~~~~~~~~~~~~ 176 (436)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~aRklA~e~gIDL~~i~GtG~~GrItk~DV~~~~~~~~~~~~~~~ 160 (406)
T PRK05704 81 AAGAEAAAKSAEAAAAPAAAAAAAAAAAANDALSPAARKLAAENGLDASAVKGTGKDGRVTKEDVLAALAAAKAAPAAAA 160 (406)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
T ss_conf 76667777777777888877787778888888894024568673999778778898885368999988743367776666
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 23333333334454445544566555556531012331000000000121100122232222233211343454444320
Q gi|254781052|r 177 VDSHKKGVFSRIINSASNIFEKSSVSEELSEERVKMSRLRQTVAKRLKDAQNTAAILSTYNEVNMSRIISIRSRYKDIFE 256 (436)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpls~mRk~IA~~m~~S~~tiP~~t~~~evd~t~l~~~r~~l~~~~~ 256 (436)
T Consensus 161 ~~~~--------------~~~~~~~~~~~~~~~v~ls~~rk~IA~~m~~S~~~~p~~t~~~evd~t~l~~~R~~lk~~~~ 226 (406)
T PRK05704 161 AAAA--------------AAAPAPALGARPEERVPMTRLRKTIAERLLEAQNTTAMLTTFNEVDMTPVMDLRKQYKDAFE 226 (406)
T ss_pred CCCC--------------CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHH
T ss_conf 6666--------------66666666788515610718999999999972366866877779980899999999777766
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 02311124321012222101146865431235683357303665415771687211135134325989999987653101
Q gi|254781052|r 257 KKHGIKLGFMGFFTKAASHVLQEIKGVNAEIDGDHIVYKNYCHIGVAVGTDKGLVVPVIRHADKMNIVEIEREIARLGRE 336 (436)
Q Consensus 257 ~~~g~klt~~~~likA~a~Al~~~P~lNa~~~~~~i~~~~~vnigiAv~~~~GL~vPVI~~a~~~~l~~i~~~~~~l~~~ 336 (436)
T Consensus 227 ~~~g~klt~~~~iikA~a~AL~~~P~~Na~~d~~~i~~~~~vnIGiAV~t~~GLivPVIk~a~~~~l~~ia~e~~~l~~~ 306 (406)
T PRK05704 227 KKHGVKLGFMSFFVKAVVEALKRYPEVNASIDGDDIVYHNYYDIGIAVGTDRGLVVPVLRDADQLSFAEIEKKIAELAKK 306 (406)
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 53387543467999999999841821238996785189057855899976996586746671318999999999999999
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCEEEEEECCCEEEEEEECCEEEEEEEEEEEEEEEEEEEEHHHHH
Q ss_conf 22223572002584088861523262101120158870789843513567888895789548899997310114028899
Q gi|254781052|r 337 ARAGHLSMRDLQNGTFTISNGGVYGSLLSSPILNPPQSGILGMHKIQERPIVEDGQIVIRPMMYLALSYDHRIVDGKEAV 416 (436)
Q Consensus 337 ar~~~l~~~el~ggt~tiSNlG~~G~~~~~piI~ppq~aIl~vg~i~~~~v~~~g~~~~~~~~~ltls~DHRvidGa~aa 416 (436)
T Consensus 307 Ar~g~L~~~dl~ggTfTiSNlG~~G~~~~tpIInppqvaILgvg~i~~~pv~~~~~i~~~~~m~lsls~DHRvidGa~aa 386 (406)
T PRK05704 307 ARDGKLSIEELTGGTFTITNGGVFGSLMSTPIINPPQSAILGMHKIKERPVAINGQIVIRPMMYLALSYDHRIIDGKEAV 386 (406)
T ss_pred HHHCCCCHHHCCCCEEEEECCCCCCCCCEECCCCCCCEEEEECCCCEEEEEEECCEEEEEEEEEEEEEEECHHCCCHHHH
T ss_conf 98389997883896499977876665424466579853899756343676888998889778898797452030739999
Q ss_pred HHHHHHHHHHCCHHHHHHCC
Q ss_conf 99999999970989887359
Q gi|254781052|r 417 TFLVRLKELLEDPERFILDL 436 (436)
Q Consensus 417 ~Fl~~l~~~le~P~~ll~~~ 436 (436)
T Consensus 387 ~Fl~~lk~~le~P~~lll~~ 406 (406)
T PRK05704 387 GFLVTIKELLEDPERLLLDL 406 (406)
T ss_pred HHHHHHHHHHHCHHHHHHCC
T ss_conf 99999999873999896169