HHsearch alignment for GI: 254781052 and conserved domain: PRK11856
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.
Probab=100.00 E-value=0 Score=733.62 Aligned_cols=322 Identities=43% Similarity=0.718 Sum_probs=312.5
Q ss_pred EEEECCCCCCCCCEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEECCCEEEEEECCCC
Q ss_conf 27776887887007999999826887834897499995276245666787878999970788885517711899834554
Q gi|254781052|r 21 TKILVPSLGESVNEATVGTWLKEIGESVEIGEILVELETDKVTVEVPSPVSGKLHEMSVAKGDTVTYGGFLGYIVEIARD 100 (436)
Q Consensus 21 ~ei~mP~lGe~m~Eg~Iv~Wlv~~Gd~V~~gd~i~eVETDKa~~evesp~~G~l~~i~v~eGd~v~VG~~i~~i~~~~~~ 100 (436)
T Consensus 2 ~~i~mP~lge~m~eg~i~~W~~~~Gd~V~~g~~l~eVeTDKa~~ei~a~~~G~l~~i~~~~G~~v~VG~~ia~i------ 75 (324)
T PRK11856 2 HEIKMPDLGEGMTEGEIVEWLVKEGDTVKKGDPLAEVETDKATVEVESPVAGTLRKILVEEGDVVPVGAPIAVI------ 75 (324)
T ss_pred EEEECCCCCCCCCEEEEEEEEECCCCEECCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEECCCCEEEEE------
T ss_conf 28878999999517999999908999978999499998076668980688839989960897995799989994------
Q ss_pred CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
Q ss_conf 31001100011222222221111111111222211111111220111001232112221000011101233222212333
Q gi|254781052|r 101 EDESIKQNSPNSTANGLPEITDQGFQMPHSPSASKLIAESGLSPSDIKGTGKRGQILKSDVMAAISRSESSVDQSTVDSH 180 (436)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~ar~la~e~gidls~v~gtG~~GrI~k~Dv~~~~~~~~~~~~~~~~~~~ 180 (436)
T Consensus 76 --------------------------~~asP~ar~lA~e~gidl~~i~gtG~~gr------------------------- 104 (324)
T PRK11856 76 --------------------------VRASPLARKLARELGVDLATVRGTGPGGR------------------------- 104 (324)
T ss_pred --------------------------CCCCCHHHHHHHHCCCCHHHCCCCCCCCC-------------------------
T ss_conf --------------------------46782445568772999766778999986-------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 33333344544455445665555565310123310000000001211001222322222332113434544443200231
Q gi|254781052|r 181 KKGVFSRIINSASNIFEKSSVSEELSEERVKMSRLRQTVAKRLKDAQNTAAILSTYNEVNMSRIISIRSRYKDIFEKKHG 260 (436)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpls~mRk~IA~~m~~S~~tiP~~t~~~evd~t~l~~~r~~l~~~~~~~~g 260 (436)
T Consensus 105 ---------------------------------~~r~~ia~~m~~s~~~ip~~~~~~~vd~~~l~~~r~~~~~~--~~~~ 149 (324)
T PRK11856 105 ---------------------------------GLRKAIAKRMVNSKFNIPHFTLTDEVDATDLLALRKSLKKA--AVEG 149 (324)
T ss_pred ---------------------------------CHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHHH--HHCC
T ss_conf ---------------------------------25899999988773039829999987579999999997654--3048
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCEEEEECCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 1124321012222101146865431235-683357303665415771687211135134325989999987653101222
Q gi|254781052|r 261 IKLGFMGFFTKAASHVLQEIKGVNAEID-GDHIVYKNYCHIGVAVGTDKGLVVPVIRHADKMNIVEIEREIARLGREARA 339 (436)
Q Consensus 261 ~klt~~~~likA~a~Al~~~P~lNa~~~-~~~i~~~~~vnigiAv~~~~GL~vPVI~~a~~~~l~~i~~~~~~l~~~ar~ 339 (436)
T Consensus 150 ~klt~~~~~ikA~~~AL~~~P~~Ns~~~~~~~i~~~~~vnIGiAV~~~~GLvvPvir~a~~~sl~~ia~~~~~l~~~Ar~ 229 (324)
T PRK11856 150 GKLTVLAFLVKAVADALKEFPLLNASFDDEGEIVLHKSVNLGIAVATDDGLVVPVIRNADKKSLAELAAEIKDLARKARE 229 (324)
T ss_pred CCCCHHHHHHHHHHHHHHHCHHHHEEECCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 87686799999999997428375069978994999357656899982786370058870008999999989999999982
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCEEEEEECCCEEEEEEECCEEEEEEEEEEEEEEEEEEEEHHHHHHHH
Q ss_conf 23572002584088861523262101120158870789843513567888895789548899997310114028899999
Q gi|254781052|r 340 GHLSMRDLQNGTFTISNGGVYGSLLSSPILNPPQSGILGMHKIQERPIVEDGQIVIRPMMYLALSYDHRIVDGKEAVTFL 419 (436)
Q Consensus 340 ~~l~~~el~ggt~tiSNlG~~G~~~~~piI~ppq~aIl~vg~i~~~~v~~~g~~~~~~~~~ltls~DHRvidGa~aa~Fl 419 (436)
T Consensus 230 ~~L~~~dl~ggtftISNlG~~g~~~~tpii~ppq~aIl~vG~i~~~pv~~~~~i~~~~~~~ltls~DHRvidGa~aa~Fl 309 (324)
T PRK11856 230 GKLKPEELSGGTFTISNLGMFGGDYFTPIINPPEVAILGVGRIEDRPVVKDGEIVVRKVMPLSLSFDHRVVDGADAARFL 309 (324)
T ss_pred CCCCHHHHCCCCEEEECCCCCCCEEEECCCCCCCEEEEECCCCEEEEEEECCEEEEEEEEEEEEEEECCCCCCHHHHHHH
T ss_conf 89998994797089976777554346635468855999857445888998997889658999998554012709999999
Q ss_pred HHHHHHHCCHHHHHH
Q ss_conf 999999709898873
Q gi|254781052|r 420 VRLKELLEDPERFIL 434 (436)
Q Consensus 420 ~~l~~~le~P~~ll~ 434 (436)
T Consensus 310 ~~l~~~le~P~~lll 324 (324)
T PRK11856 310 KALKELLENPALLLL 324 (324)
T ss_pred HHHHHHHCCHHHHHC
T ss_conf 999998619887659