HHsearch alignment for GI: 254781052 and conserved domain: TIGR01108
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit; InterPro: IPR005776 This family describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea . The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.; GO: 0008948 oxaloacetate decarboxylase activity, 0006814 sodium ion transport.
Probab=98.79 E-value=7.3e-09 Score=78.00 Aligned_cols=65 Identities=29% Similarity=0.457 Sum_probs=59.0
Q ss_pred EEEECCCCCCCCCEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEECCCE
Q ss_conf 27776887887007999999826887834897499995276245666787878999970788885517711
Q gi|254781052|r 21 TKILVPSLGESVNEATVGTWLKEIGESVEIGEILVELETDKVTVEVPSPVSGKLHEMSVAKGDTVTYGGFL 91 (436)
Q Consensus 21 ~ei~mP~lGe~m~Eg~Iv~Wlv~~Gd~V~~gd~i~eVETDKa~~evesp~~G~l~~i~v~eGd~v~VG~~i 91 (436)
T Consensus 552 ~~vTaP~a------G~i~~~~V~~G~~V~~G~vlL~~EAMKME~Ei~A~~aG~V~~i~v~~Gd~V~~gqVL 616 (616)
T TIGR01108 552 TDVTAPIA------GSIVKITVSEGDEVKEGEVLLVVEAMKMETEIKAAAAGIVEEILVKKGDKVSPGQVL 616 (616)
T ss_pred CCCCCCCC------CCEEEEEECCCCEECCCCEEEEEECCCCCHHHCCCCCCCEEEEEECCCCEECCCCCC
T ss_conf 87566777------736999835787431577588531001112200543570112344578750886679