HHsearch alignment for GI: 254781052 and conserved domain: TIGR01108
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit; InterPro: IPR005776 This family describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea . The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.; GO: 0008948 oxaloacetate decarboxylase activity, 0006814 sodium ion transport.
Probab=93.53 E-value=0.078 Score=31.59 Aligned_cols=26 Identities=35% Similarity=0.727 Sum_probs=8.2
Q ss_pred EECCCCCEEEEEEECCCCEEEECCCE
Q ss_conf 66787878999970788885517711
Q gi|254781052|r 66 VPSPVSGKLHEMSVAKGDTVTYGGFL 91 (436)
Q Consensus 66 vesp~~G~l~~i~v~eGd~v~VG~~i 91 (436)
T Consensus 554 vTaP~aG~i~~~~V~~G~~V~~G~vl 579 (616)
T TIGR01108 554 VTAPIAGSIVKITVSEGDEVKEGEVL 579 (616)
T ss_pred CCCCCCCCEEEEEECCCCEECCCCEE
T ss_conf 56677773699983578743157758