HHsearch alignment for GI: 254781052 and conserved domain: TIGR01348
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; InterPro: IPR006256 This group of sequences are a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and percent identity (UPGMA) trees. Members contain two or three copies of the lipoyl-binding domain. Escherichia coli AceF is included in this set while mitochondrial and some other bacterial forms are excluded. dihydrolipoyllysine-residue acetyltransferase E2 component of pyruvate dehydrogenase complex; GO: 0004742 dihydrolipoyllysine-residue acetyltransferase activity, 0006096 glycolysis, 0045254 pyruvate dehydrogenase complex.
Probab=100.00 E-value=0 Score=805.92 Aligned_cols=411 Identities=30% Similarity=0.510 Sum_probs=351.7
Q ss_pred CEEEECCCCCCCCCEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEECCCEEEEEECCC
Q ss_conf 42777688788700799999982688783489749999527624566678787899997078888551771189983455
Q gi|254781052|r 20 ATKILVPSLGESVNEATVGTWLKEIGESVEIGEILVELETDKVTVEVPSPVSGKLHEMSVAKGDTVTYGGFLGYIVEIAR 99 (436)
Q Consensus 20 ~~ei~mP~lGe~m~Eg~Iv~Wlv~~Gd~V~~gd~i~eVETDKa~~evesp~~G~l~~i~v~eGd~v~VG~~i~~i~~~~~ 99 (436)
T Consensus 206 ~~~v~vPDiGdn~~~~~V~evlV~vGDtV~~~QslItLE~DKA~~EvPa~asGvv~~v~v~vGD~v~~G~~il~L~~~~s 285 (655)
T TIGR01348 206 VQEVKVPDIGDNIEKVEVIEVLVKVGDTVSADQSLITLESDKASMEVPAPASGVVKSVKVKVGDSVSTGDLILVLSVAGS 285 (655)
T ss_pred CEEEECCCCCCCCCCEEEEEEEECCCCEECCCCCEEEEECCEEEEEECCCCCCEEEEEEEEECCEECCCCEEEEEEECCC
T ss_conf 41544265377777502799995437776478867887067147874689852378999865667057888999710567
Q ss_pred CCCCHHHHH--------CCCCCCCC-----------CC----CCCCCCCC------CCCCCCCCCCCCCCCCCHHHHCCC
Q ss_conf 431001100--------01122222-----------22----21111111------111222211111111220111001
Q gi|254781052|r 100 DEDESIKQN--------SPNSTANG-----------LP----EITDQGFQ------MPHSPSASKLIAESGLSPSDIKGT 150 (436)
Q Consensus 100 ~~~~~~~~~--------~~~~~~~~-----------~~----~~~~~~~~------~~asP~ar~la~e~gidls~v~gt 150 (436)
T Consensus 286 t-p~t~~~p~~a~p~~~spa~~~~~aAa~pA~~~A~~~~p~~~~t~~~~~~~GrPvv~A~P~vR~LARe~Gvdl~~vkGt 364 (655)
T TIGR01348 286 T-PATAEAPASAEPAAQSPAAEQKEAAAAPAAAKAEAPAPVDAGTQNPAKVDGRPVVHAAPAVRRLAREFGVDLSKVKGT 364 (655)
T ss_pred C-CCCHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHCCEEEEEECC
T ss_conf 7-664135634587453503416676777765888877876766568762387230017628899988827011110136
Q ss_pred CCCCCCCCCCCHHHHHCCC-CCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 2321122210000111012-332222123333333334454-44554456655555653101233100000000012110
Q gi|254781052|r 151 GKRGQILKSDVMAAISRSE-SSVDQSTVDSHKKGVFSRIIN-SASNIFEKSSVSEELSEERVKMSRLRQTVAKRLKDAQN 228 (436)
Q Consensus 151 G~~GrI~k~Dv~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vpls~mRk~IA~~m~~S~~ 228 (436)
T Consensus 365 g~~GRI~~EDVq~~v~~~~GtGiPe~rA---~aa~a~a~gG~~~~~P~P~VdFsKFGeve~~~lsri~k~~~anL~r~W~ 441 (655)
T TIGR01348 365 GKKGRILREDVQKFVKEAVGTGIPEKRA---KAAAASAAGGIPGLLPWPEVDFSKFGEVEEVDLSRIRKISGANLTRNWV 441 (655)
T ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCC---CCCCCHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCHHHCCC
T ss_conf 8888625357999806433678753225---5331102031004687785474325447751366401100011212553
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHH--HHHHCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCEEEEECCCCCE
Q ss_conf 012223222223321134345444--432002--311124321012222101146865431235--68335730366541
Q gi|254781052|r 229 TAAILSTYNEVNMSRIISIRSRYK--DIFEKK--HGIKLGFMGFFTKAASHVLQEIKGVNAEID--GDHIVYKNYCHIGV 302 (436)
Q Consensus 229 tiP~~t~~~evd~t~l~~~r~~l~--~~~~~~--~g~klt~~~~likA~a~Al~~~P~lNa~~~--~~~i~~~~~vnigi 302 (436)
T Consensus 442 ~iPhVT~FDkaDiT~lEa~R~~~~~EnAa~~KnG~G~KLT~~~~L~Ka~A~aL~~~P~FNaSL~~~g~~l~~KkYv~IG~ 521 (655)
T TIGR01348 442 MIPHVTHFDKADITELEAFRKQQNKENAAVEKNGEGVKLTVLAILMKAVAAALKKFPKFNASLDLGGEQLILKKYVNIGV 521 (655)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEE
T ss_conf 47821026811168999999871510001311789810358899999999999753531466230326355534688667
Q ss_pred EEEECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCEEEEEECCC
Q ss_conf 57716872111351343259899999876531012222357200258408886152326210112015887078984351
Q gi|254781052|r 303 AVGTDKGLVVPVIRHADKMNIVEIEREIARLGREARAGHLSMRDLQNGTFTISNGGVYGSLLSSPILNPPQSGILGMHKI 382 (436)
Q Consensus 303 Av~~~~GL~vPVI~~a~~~~l~~i~~~~~~l~~~ar~~~l~~~el~ggt~tiSNlG~~G~~~~~piI~ppq~aIl~vg~i 382 (436)
T Consensus 522 AvDTP~GLlVPV~kdvdrKGi~eL~~e~~~LA~kAR~~KL~p~~MqGacFtISsLGGiGGt~FtPIvNaPEVAILGVSks 601 (655)
T TIGR01348 522 AVDTPNGLLVPVIKDVDRKGIVELALELSDLAKKARDGKLTPDEMQGACFTISSLGGIGGTAFTPIVNAPEVAILGVSKS 601 (655)
T ss_pred EEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHCCHH
T ss_conf 85579984753286468413899999999999986126868302378405110223455454667305741342320144
Q ss_pred EEEEEEECC--EEEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 356788889--5789548899997310114028899999999999709898873
Q gi|254781052|r 383 QERPIVEDG--QIVIRPMMYLALSYDHRIVDGKEAVTFLVRLKELLEDPERFIL 434 (436)
Q Consensus 383 ~~~~v~~~g--~~~~~~~~~ltls~DHRvidGa~aa~Fl~~l~~~le~P~~ll~ 434 (436)
T Consensus 602 ~~~PvW~g~kG~F~Pr~mLPLSLsYDHRvIdGA~AArF~~~l~~~L~D~r~~~L 655 (655)
T TIGR01348 602 AMEPVWDGKKGEFEPRLMLPLSLSYDHRVIDGADAARFTTYLSELLADIRRLLL 655 (655)
T ss_pred HCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 153431687675576000530000010022354688999998755544886709