HHsearch alignment for GI: 254781052 and conserved domain: TIGR02927
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; InterPro: IPR014276 This entry represents the mainly actinobacterial clade of the E2 component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (IPR001078 from INTERPRO), one or two biotin domains (IPR000089 from INTERPRO) and an E3-component binding domain (IPR004167 from INTERPRO)..
Probab=100.00 E-value=0 Score=802.42 Aligned_cols=412 Identities=38% Similarity=0.601 Sum_probs=343.9
Q ss_pred HCCCEEEECCCCCCCCCEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEECCCEEEEEE
Q ss_conf 22842777688788700799999982688783489749999527624566678787899997078888551771189983
Q gi|254781052|r 17 RSMATKILVPSLGESVNEATVGTWLKEIGESVEIGEILVELETDKVTVEVPSPVSGKLHEMSVAKGDTVTYGGFLGYIVE 96 (436)
Q Consensus 17 ~~M~~ei~mP~lGe~m~Eg~Iv~Wlv~~Gd~V~~gd~i~eVETDKa~~evesp~~G~l~~i~v~eGd~v~VG~~i~~i~~ 96 (436)
T Consensus 132 sg~aT~v~MPeLGESVTEGTvt~WLKaVGD~vEvDEPllEVsTDKVDTEiPSPvaGtlleI~a~EDdtVeVG~vlA~IGD 211 (607)
T TIGR02927 132 SGEATEVEMPELGESVTEGTVTRWLKAVGDTVEVDEPLLEVSTDKVDTEIPSPVAGTLLEILAEEDDTVEVGAVLAKIGD 211 (607)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEECCCEEEEECC
T ss_conf 64656331644676202313787886339877633763564257206666887143688898177886431506654237
Q ss_pred CCC--CCCCHHHHHCCCCCC--------CCCCCC--------------------------------------CCCCCCCC
Q ss_conf 455--431001100011222--------222221--------------------------------------11111111
Q gi|254781052|r 97 IAR--DEDESIKQNSPNSTA--------NGLPEI--------------------------------------TDQGFQMP 128 (436)
Q Consensus 97 ~~~--~~~~~~~~~~~~~~~--------~~~~~~--------------------------------------~~~~~~~~ 128 (436)
T Consensus 212 an~A~A~~~P~~E~~P~PkaeP~~ea~~ep~P~~k~~p~a~p~p~p~P~p~ae~papaa~aA~~~~~~aaPvssGd~~pY 291 (607)
T TIGR02927 212 ANDAGAEDEPKEEEKPEPKAEPKSEAKSEPAPEAKAKPKAKPKPEPKPKPKAEEPAPAAKAATEKTAAAAPVSSGDSSPY 291 (607)
T ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 65565010678778777767767875567778888788788776788632664678887655456432475124688861
Q ss_pred CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCC
Q ss_conf 122221111111122011100123211222100001110123322221233333333344544455445665555-5653
Q gi|254781052|r 129 HSPSASKLIAESGLSPSDIKGTGKRGQILKSDVMAAISRSESSVDQSTVDSHKKGVFSRIINSASNIFEKSSVSE-ELSE 207 (436)
Q Consensus 129 asP~ar~la~e~gidls~v~gtG~~GrI~k~Dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 207 (436)
T Consensus 292 VTPlVRKLA~~~GvDLssVkGTGvGGRIRKQDVlAAA~~a~ea~~A~Aa~aaaAapaap-AaAa~~~sakp~p~~a~LRG 370 (607)
T TIGR02927 292 VTPLVRKLAKEKGVDLSSVKGTGVGGRIRKQDVLAAAKAAEEAKEAAAAEAAAAAPAAP-AAAAKKASAKPEPEKAKLRG 370 (607)
T ss_pred CHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH-HHHHHHCCCCCCHHHHCCCC
T ss_conf 00346877762683103411113455200566999867534677300257502003107-77501103677622102577
Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10123310000000001211001222322222332113434544443200231112432101222210114686543123
Q gi|254781052|r 208 ERVKMSRLRQTVAKRLKDAQNTAAILSTYNEVNMSRIISIRSRYKDIFEKKHGIKLGFMGFFTKAASHVLQEIKGVNAEI 287 (436)
Q Consensus 208 ~~vpls~mRk~IA~~m~~S~~tiP~~t~~~evd~t~l~~~r~~l~~~~~~~~g~klt~~~~likA~a~Al~~~P~lNa~~ 287 (436)
T Consensus 371 tT~K~nRiRqi~A~k~~esLQ~sAQLT~~~EVD~TrvaaLRaraK~~F~ek~Gv~LTfLPFfv~Av~eALkaHP~vNASy 450 (607)
T TIGR02927 371 TTQKVNRIRQITAKKTVESLQISAQLTQVHEVDMTRVAALRARAKAEFLEKEGVNLTFLPFFVKAVVEALKAHPNVNASY 450 (607)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 40456788999988889988643420601685023488886401557787168730015789999999986188621330
Q ss_pred --CCCCEEEEECCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEE
Q ss_conf --568335730366541577168721113513432598999998765310122223572002584088861523262101
Q gi|254781052|r 288 --DGDHIVYKNYCHIGVAVGTDKGLVVPVIRHADKMNIVEIEREIARLGREARAGHLSMRDLQNGTFTISNGGVYGSLLS 365 (436)
Q Consensus 288 --~~~~i~~~~~vnigiAv~~~~GL~vPVI~~a~~~~l~~i~~~~~~l~~~ar~~~l~~~el~ggt~tiSNlG~~G~~~~ 365 (436)
T Consensus 451 N~etKe~TYhd~eh~giAVDTp~GLL~PVi~NAgDLslpglAkaI~DlAaRaR~nklkPdeLsGgTFTITNiGS~GALfD 530 (607)
T TIGR02927 451 NEETKEVTYHDAEHLGIAVDTPRGLLVPVIHNAGDLSLPGLAKAIADLAARARDNKLKPDELSGGTFTITNIGSEGALFD 530 (607)
T ss_pred CCCCCEEEEEEEEEEEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCC
T ss_conf 46875031343102014654788863462312565773679999988998753478785402587325640067740115
Q ss_pred CCCCCCCCEEEEEECCCEEEEEEE---CC--EEEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHCCH
Q ss_conf 120158870789843513567888---89--57895488999973101140288999999999997098
Q gi|254781052|r 366 SPILNPPQSGILGMHKIQERPIVE---DG--QIVIRPMMYLALSYDHRIVDGKEAVTFLVRLKELLEDP 429 (436)
Q Consensus 366 ~piI~ppq~aIl~vg~i~~~~v~~---~g--~~~~~~~~~ltls~DHRvidGa~aa~Fl~~l~~~le~P 429 (436)
T Consensus 531 TPIl~pP~aaiLG~GAIvkrPrVI~DedG~esIaiRsvcyLpLtYDHrlvDGADAgRfl~TiK~RLEeg 599 (607)
T TIGR02927 531 TPILVPPQAAILGTGAIVKRPRVIKDEDGGESIAIRSVCYLPLTYDHRLVDGADAGRFLTTIKKRLEEG 599 (607)
T ss_pred CCCCCCCCHHHHCCCCEEECCEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHCC
T ss_conf 772367542321265431077678857898157651122204544640340000456898987765146