HHsearch alignment for GI: 254781052 and conserved domain: pfam05896
>pfam05896 NQRA Na(+)-translocating NADH-quinone reductase subunit A (NQRA). This family consists of several bacterial Na(+)-translocating NADH-quinone reductase subunit A (NQRA) proteins. The Na(+)-translocating NADH: ubiquinone oxidoreductase (Na(+)-NQR) generates an electrochemical Na(+) potential driven by aerobic respiration.
Probab=96.05 E-value=0.0088 Score=37.84 Aligned_cols=53 Identities=25% Similarity=0.362 Sum_probs=38.9
Q ss_pred EEEEEEEEECCCCEECCCCEEEEEECCCCE--EEEECCCCCEEEEEEECCCCEEEECCCE
Q ss_conf 799999982688783489749999527624--5666787878999970788885517711
Q gi|254781052|r 34 EATVGTWLKEIGESVEIGEILVELETDKVT--VEVPSPVSGKLHEMSVAKGDTVTYGGFL 91 (436)
Q Consensus 34 Eg~Iv~Wlv~~Gd~V~~gd~i~eVETDKa~--~evesp~~G~l~~i~v~eGd~v~VG~~i 91 (436)
T Consensus 37 ~glkPkl~VkeGD~Vk~G~pLF~---dK~np~i~f~SPvsG~V~~I~R--G~kR~ilsiv 91 (257)
T pfam05896 37 VGMKPKMLVKEGDKVKAGQPLFE---DKKNPGVKFTAPASGTVVAINR--GAKRVLQSVV 91 (257)
T ss_pred CCCCEEEEEECCCEEECCCEEEE---EECCCCCEEECCCCEEEEEECC--CCCCCEEEEE
T ss_conf 88732699834999855875799---7369884685678738950105--6751015999