HHsearch results for GI: 254781052 and protein with PDBid: 2i9d_A
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- 2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=9.9e-40 Score=280.54 Aligned_cols=193 Identities=15% Similarity=0.118 Sum_probs=171.4
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CEE
Q ss_conf 0000000001211001222322222332113434544443200231112432101222210114686543123568-335
Q gi|254781052|r 215 LRQTVAKRLKDAQNTAAILSTYNEVNMSRIISIRSRYKDIFEKKHGIKLGFMGFFTKAASHVLQEIKGVNAEIDGD-HIV 293 (436)
Q Consensus 215 mRk~IA~~m~~S~~tiP~~t~~~evd~t~l~~~r~~l~~~~~~~~g~klt~~~~likA~a~Al~~~P~lNa~~~~~-~i~ 293 (436)
.||...+.+... ..||++++.++|+|+++++|++. |+||+++++||+++||.+||++|++|+++ +++
T Consensus 14 ~R~~~f~~f~~~--~~P~~s~t~~iDvt~l~~~~k~~----------k~sf~~~l~~av~~al~~~Pe~n~~~~~d~~i~ 81 (217)
T 2i9d_A 14 ERKENFNFFRHF--QNPQLSITSEVECGGARQRAKAA----------GQSFFLHYLYAVLRAANEIPEFRYRIDPDGRVV 81 (217)
T ss_dssp TTHHHHHHHTTC--SBCEEEEEEEEECHHHHHHHHHT----------TCCHHHHHHHHHHHHHHHSGGGGEEECTTSCEE
T ss_pred CHHHHHHHHHCC--CCCEEEEEEEEEHHHHHHHHHHC----------CCCCHHHHHHHHHHHHHHCHHHEEEECCCCEEE
T ss_conf 459999998578--99879999998889999999983----------998279999999999863967649984895799
Q ss_pred EEECCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCC-------CCCCCCCCCCCEEEEECCCCCCCCEEC
Q ss_conf 7303665415771687211135134325989999987653101222-------235720025840888615232621011
Q gi|254781052|r 294 YKNYCHIGVAVGTDKGLVVPVIRHADKMNIVEIEREIARLGREARA-------GHLSMRDLQNGTFTISNGGVYGSLLSS 366 (436)
Q Consensus 294 ~~~~vnigiAv~~~~GL~vPVI~~a~~~~l~~i~~~~~~l~~~ar~-------~~l~~~el~ggt~tiSNlG~~G~~~~~ 366 (436)
+++++|+|+||++++|+++|++++++.+++.++.+++.++.+++++ +++.+.++++|||+|||+|.+|.+.++
T Consensus 82 ~~~~v~i~~av~~~~~~~~~~i~~~~~~~l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iSnlg~~~ft~~~ 161 (217)
T 2i9d_A 82 LYDTIDMLSPIKIKENGKFFTTRFPYHNDFDTFYQEARLIIDAIPEDGDPYAAENEEVADGDYGLILLSATPDLYFTSIT 161 (217)
T ss_dssp EESCCEEEEEEECSTTSCEEEEEECCCSSHHHHHHHHHHHHHHCCSSCCTTHHHHHHHHHTCCCEEEEEECTTCCCSEEC
T ss_pred ECCCCCEEEEEEECCCCEECEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCC
T ss_conf 83765579999827994764182488799999999999999998761102431578874567988999568865655624
Q ss_pred CCCCCCCEE---EEEECCCEEEEEEECCEEEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHC
Q ss_conf 201588707---8984351356788889578954889999731011402889999999999970
Q gi|254781052|r 367 PILNPPQSG---ILGMHKIQERPIVEDGQIVIRPMMYLALSYDHRIVDGKEAVTFLVRLKELLE 427 (436)
Q Consensus 367 piI~ppq~a---Il~vg~i~~~~v~~~g~~~~~~~~~ltls~DHRvidGa~aa~Fl~~l~~~le 427 (436)
+.+++|+.. +++.|.+.+ .+| |.+|+|||+||||++||++||+||+.|+++||
T Consensus 162 ~~~~~~~~~~~P~i~~Gk~~~----~~g----r~~mpvslt~DHrviDG~~aa~Fl~~l~~~LE 217 (217)
T 2i9d_A 162 GTQEKRSGNNYPLLNAGKAII----REG----RLVMPIAMTIHHGFIDGHHLSLFYKKVEDFLK 217 (217)
T ss_dssp CCBCSTTCCSSCEEEECCCEE----ETT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCEEEEEECCCEEE----ECC----EEEEEEEEEEECHHHCHHHHHHHHHHHHHHHC
T ss_conf 666688531788998366688----999----69999978966235481999999999999749