HHsearch results for GI: 254781052 and protein with PDBid: 2ii3_A
>2ii3_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=100.00 E-value=0 Score=516.63 Aligned_cols=230 Identities=33% Similarity=0.538 Sum_probs=220.5
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 65310123310000000001211001222322222332113434544443200231112432101222210114686543
Q gi|254781052|r 205 LSEERVKMSRLRQTVAKRLKDAQNTAAILSTYNEVNMSRIISIRSRYKDIFEKKHGIKLGFMGFFTKAASHVLQEIKGVN 284 (436)
Q Consensus 205 ~~~~~vpls~mRk~IA~~m~~S~~tiP~~t~~~evd~t~l~~~r~~l~~~~~~~~g~klt~~~~likA~a~Al~~~P~lN 284 (436)
..++.+|+++|||+||++|++||+ +||||++.++|+|+++++|+++|+.+.. .|+|+||++||+||+++||++||.+|
T Consensus 29 ~~~~~~pl~~~rk~ia~~m~~S~~-iPh~~~~~evD~t~l~~~R~~l~~~~~~-~g~klS~~~~likAva~aL~~~P~~N 106 (262)
T 2ii3_A 29 GKDRTEPVKGFHKAMVKTMSAALK-IPHFGYCDEVDLTELVKLREELKPIAFA-RGIKLSFMPFFLKAASLGLLQFPILN 106 (262)
T ss_dssp CCCEEEECCGGGHHHHHHHHHGGG-SCEEEEEEEEECHHHHHHHHHHHHHHHH-TTCCCCSHHHHHHHHHHHHHHCGGGS
T ss_pred CCCEEEECHHHHHHHHHHHHHHHH-CCEEEEEEEEEHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHCCHHC
T ss_conf 986488864999999999999752-7809999998779999999985455551-39834379999999999998490512
Q ss_pred CCCCC--CCEEEEECCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 12356--8335730366541577168721113513432598999998765310122223572002584088861523262
Q gi|254781052|r 285 AEIDG--DHIVYKNYCHIGVAVGTDKGLVVPVIRHADKMNIVEIEREIARLGREARAGHLSMRDLQNGTFTISNGGVYGS 362 (436)
Q Consensus 285 a~~~~--~~i~~~~~vnigiAv~~~~GL~vPVI~~a~~~~l~~i~~~~~~l~~~ar~~~l~~~el~ggt~tiSNlG~~G~ 362 (436)
++|++ +.++++.++|||+||++++||+||||++||++++.+|++++++|++|+|+|+|+++|++||||||||+|+||+
T Consensus 107 a~~~~~~~~i~~~~~v~i~iav~~~~GL~vPVI~~a~~~sl~~ia~~~~~l~~~ar~~~L~~~d~~ggTftisnlG~~g~ 186 (262)
T 2ii3_A 107 ASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGSIGG 186 (262)
T ss_dssp EEECTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCHHHHSCCCEEEECGGGTCC
T ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC
T ss_conf 24432366366764024343201577734443046544132889999999999987289775456882699526787654
Q ss_pred CEECCCCCCCCEEEEEECCCEEEEEEE-CCEEEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHCC
Q ss_conf 101120158870789843513567888-89578954889999731011402889999999999970989887359
Q gi|254781052|r 363 LLSSPILNPPQSGILGMHKIQERPIVE-DGQIVIRPMMYLALSYDHRIVDGKEAVTFLVRLKELLEDPERFILDL 436 (436)
Q Consensus 363 ~~~~piI~ppq~aIl~vg~i~~~~v~~-~g~~~~~~~~~ltls~DHRvidGa~aa~Fl~~l~~~le~P~~ll~~~ 436 (436)
.+|+|||||||+||||+|+++++|++. ||++.+|++|+||||||||+|||++||+||++|+++||||+.|||||
T Consensus 187 ~~~tpii~ppq~aIlgvG~i~~~pvv~~dg~i~~r~~m~lsls~DHRviDGa~Aa~FL~~l~~~LE~P~~lll~~ 261 (262)
T 2ii3_A 187 TYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFMLLDL 261 (262)
T ss_dssp SCEECCCCTTCCEEEEECCCEEEEEECTTSCEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSTHHHHHHC
T ss_pred CEEECCCCCCCCEEEECCCEEEEEEECCCCCEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHCCC
T ss_conf 148712348852155046507887985799389834889998801334061999999999999976999986047