HHsearch results for GI: 254781052 and protein with PDBid: 2ii3_A

>2ii3_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=100.00  E-value=0  Score=516.63  Aligned_cols=230  Identities=33%  Similarity=0.538  Sum_probs=220.5

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             65310123310000000001211001222322222332113434544443200231112432101222210114686543
Q gi|254781052|r  205 LSEERVKMSRLRQTVAKRLKDAQNTAAILSTYNEVNMSRIISIRSRYKDIFEKKHGIKLGFMGFFTKAASHVLQEIKGVN  284 (436)
Q Consensus       205 ~~~~~vpls~mRk~IA~~m~~S~~tiP~~t~~~evd~t~l~~~r~~l~~~~~~~~g~klt~~~~likA~a~Al~~~P~lN  284 (436)
                      ..++.+|+++|||+||++|++||+ +||||++.++|+|+++++|+++|+.+.. .|+|+||++||+||+++||++||.+|
T Consensus        29 ~~~~~~pl~~~rk~ia~~m~~S~~-iPh~~~~~evD~t~l~~~R~~l~~~~~~-~g~klS~~~~likAva~aL~~~P~~N  106 (262)
T 2ii3_A           29 GKDRTEPVKGFHKAMVKTMSAALK-IPHFGYCDEVDLTELVKLREELKPIAFA-RGIKLSFMPFFLKAASLGLLQFPILN  106 (262)
T ss_dssp             CCCEEEECCGGGHHHHHHHHHGGG-SCEEEEEEEEECHHHHHHHHHHHHHHHH-TTCCCCSHHHHHHHHHHHHHHCGGGS
T ss_pred             CCCEEEECHHHHHHHHHHHHHHHH-CCEEEEEEEEEHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHCCHHC
T ss_conf             986488864999999999999752-7809999998779999999985455551-39834379999999999998490512


Q ss_pred             CCCCC--CCEEEEECCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf             12356--8335730366541577168721113513432598999998765310122223572002584088861523262
Q gi|254781052|r  285 AEIDG--DHIVYKNYCHIGVAVGTDKGLVVPVIRHADKMNIVEIEREIARLGREARAGHLSMRDLQNGTFTISNGGVYGS  362 (436)
Q Consensus       285 a~~~~--~~i~~~~~vnigiAv~~~~GL~vPVI~~a~~~~l~~i~~~~~~l~~~ar~~~l~~~el~ggt~tiSNlG~~G~  362 (436)
                      ++|++  +.++++.++|||+||++++||+||||++||++++.+|++++++|++|+|+|+|+++|++||||||||+|+||+
T Consensus       107 a~~~~~~~~i~~~~~v~i~iav~~~~GL~vPVI~~a~~~sl~~ia~~~~~l~~~ar~~~L~~~d~~ggTftisnlG~~g~  186 (262)
T 2ii3_A          107 ASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGSIGG  186 (262)
T ss_dssp             EEECTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCHHHHSCCCEEEECGGGTCC
T ss_pred             CCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC
T ss_conf             24432366366764024343201577734443046544132889999999999987289775456882699526787654


Q ss_pred             CEECCCCCCCCEEEEEECCCEEEEEEE-CCEEEEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHCC
Q ss_conf             101120158870789843513567888-89578954889999731011402889999999999970989887359
Q gi|254781052|r  363 LLSSPILNPPQSGILGMHKIQERPIVE-DGQIVIRPMMYLALSYDHRIVDGKEAVTFLVRLKELLEDPERFILDL  436 (436)
Q Consensus       363 ~~~~piI~ppq~aIl~vg~i~~~~v~~-~g~~~~~~~~~ltls~DHRvidGa~aa~Fl~~l~~~le~P~~ll~~~  436 (436)
                      .+|+|||||||+||||+|+++++|++. ||++.+|++|+||||||||+|||++||+||++|+++||||+.|||||
T Consensus       187 ~~~tpii~ppq~aIlgvG~i~~~pvv~~dg~i~~r~~m~lsls~DHRviDGa~Aa~FL~~l~~~LE~P~~lll~~  261 (262)
T 2ii3_A          187 TYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFMLLDL  261 (262)
T ss_dssp             SCEECCCCTTCCEEEEECCCEEEEEECTTSCEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSTHHHHHHC
T ss_pred             CEEECCCCCCCCEEEECCCEEEEEEECCCCCEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHCCC
T ss_conf             148712348852155046507887985799389834889998801334061999999999999976999986047