RPSBLAST alignment for GI: 254781052 and conserved domain: TIGR01348
>gnl|CDD|162310 TIGR01348, PDHac_trf_long, pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model. Length = 546
Score = 213 bits (544), Expect = 7e-56
Identities = 125/452 (27%), Positives = 214/452 (47%), Gaps = 44/452 (9%)
Query: 13 EEKVRSMATKILVPSLGESVNEATVGTWLKEIGESVEIGEILVELETDKVTVEVPSPVSG 72
S ++ VP +G + + TV L ++G++V + L+ LE+DK ++EVP+P SG
Sbjct: 109 AAGQSSGVQEVTVPDIG-DIEKVTVIEVLVKVGDTVSADQSLITLESDKASMEVPAPASG 167
Query: 73 KLHEMSVAKGDTVTYGGFLGYIVEIARDEDESIKQNSPNSTANGLP-------------- 118
+ + V GD+V G + + +A + + A P
Sbjct: 168 VVKSVKVKVGDSVPTGDLI-LTLSVAGSTPATAPAPASAQPAAQSPAATQPEPAAAPAAA 226
Query: 119 ---------EITDQGFQMPH-SPSASKLIAESGLSPSDIKGTGKRGQILKSDVM----AA 164
T ++ H +P+ +L E G+ S +KGTG +G+IL+ DV
Sbjct: 227 KAQAPAPQQAGTQNPAKVDHAAPAVRRLAREFGVDLSAVKGTGIKGRILREDVQRFVKEP 286
Query: 165 ISRSESSVDQSTVDSHKKGVFSRIINSASNIFEKSSVSEELSEERVKMSRLRQTVAKRLK 224
R++++ + G + + F K E V MSR+R+ L
Sbjct: 287 SVRAQAAAASAA------GGAPGALPWPNVDFSKFG-----EVEEVDMSRIRKISGANLT 335
Query: 225 DAQNTAAILSTYNEVNMSRIISIRSRYKDIFEKKHGIKLGFMGFFTKAASHVLQEIKGVN 284
++ +++ +++ + + R + EK+ G+KL + KA + L++ N
Sbjct: 336 RNWTMIPHVTHFDKADITEMEAFRKQQNAAVEKE-GVKLTVLHILMKAVAAALKKFPKFN 394
Query: 285 AEID--GDHIVYKNYCHIGVAVGTDKGLVVPVIRHADKMNIVEIEREIARLGREARAGHL 342
A +D G+ ++ K Y +IGVAV T GL+VPVI+ D+ I E+ E++ L ++AR G L
Sbjct: 395 ASLDLGGEQLILKKYVNIGVAVDTPNGLLVPVIKDVDRKGITELALELSDLAKKARDGKL 454
Query: 343 SMRDLQNGTFTISNGGVYGSLLSSPILNPPQSGILGMHKIQERPIVEDGQIVIRPMMYLA 402
+ ++Q FTIS+ G G +PI+N P+ ILG+ K P+ + R M+ L+
Sbjct: 455 TPDEMQGACFTISSLGGIGGTAFTPIVNAPEVAILGVSKSGMEPVWNGKEFEPRLMLPLS 514
Query: 403 LSYDHRIVDGKEAVTFLVRLKELLEDPERFIL 434
LSYDHR++DG +A F + E L D R +L
Sbjct: 515 LSYDHRVIDGADAARFTTYICESLADIRRLLL 546